BLAST/PSIBLAST alignment of GI: 254780474 and GI: 86360308 at iteration 1
>gi|86360308|ref|YP_472196.1| cytochrome O ubiquinol oxidase, subunit II protein [Rhizobium etli CFN 42] Length = 371
>gi|86284410|gb|ABC93469.1| cytochrome O ubiquinol oxidase, subunit II protein [Rhizobium etli CFN 42] Length = 371
 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/297 (59%), Positives = 220/297 (74%), Gaps = 1/297 (0%)

Query: 33  FIVMDPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHST 92
            +VM P GDIA QQ  LI IA  LMLLI+VPV F  L FAW+YR +N  A Y P+W HST
Sbjct: 1   MVVMAPSGDIAAQQRDLIVIATVLMLLIIVPVIFLTLLFAWRYRRSNTAATYAPEWHHST 60

Query: 93  LLELFVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVALDWK 152
            LE+ +W  PL I+  L  +TW +TH++DPY PL+R+   ++I  ++KPL VEVVALDWK
Sbjct: 61  RLEIVIWAAPLAIIIALGAVTWISTHKLDPYRPLDRLDAERAIPADTKPLTVEVVALDWK 120

Query: 153 WLFLLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIPGLAGQIYAMAGMETKLHAVM 212
           WLF  PE  +A +NEL  P+D P+ F+ITASSVMNSFYIP LAGQIYAM GMETKLHAV+
Sbjct: 121 WLFFYPELGIATVNELAAPVDMPVNFKITASSVMNSFYIPALAGQIYAMPGMETKLHAVI 180

Query: 213 NKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWISKVKRQGTFLNRQEYLLLKKPSE 272
           N++G Y GFSANYSG GFSHMRFKF+G +  GF+ W++KVK+QGT LNR  YL L+KPSE
Sbjct: 181 NREGEYEGFSANYSGAGFSHMRFKFHGLTRAGFDAWVAKVKQQGTMLNRDAYLKLEKPSE 240

Query: 273 RDSVRYFSPIEKGLYYSILNLCVHPGKICMDEMMRIDALGGGGMRGI-DRHSLIYDE 328
           ++ VRY++  +  LY +ILN+C  PGK+CM+EMM ID +GGGG     +R  L YD 
Sbjct: 241 KEPVRYYAGADADLYTAILNMCATPGKMCMNEMMHIDMMGGGGKESAENREKLQYDN 297