RPSBLAST alignment of GI: 254780474 and protein with PDBid: 3hb3
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B* Length = 298
Score = 123 bits (309), Expect = 6e-29
Identities = 42/241 (17%), Positives = 93/241 (38%), Gaps = 39/241 (16%)
Query: 37 DPYGDIALQQASLIRIAVALMLLIVVPVFFSILFFAWKYRSTNKKARYDPKWCHSTLLEL 96
+A Q L + ++ + + V +L ++ + ++ H+T +E+
Sbjct: 51 PASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFN--RRANPVPARFTHNTPIEV 108
Query: 97 FVWLVPLVIVGFLAVITWDATHRMDPYAPLERISESKSIAKNSKPLVVEVVALDWKWLF- 155
LVP++I+ + + R N LV++ + W W +
Sbjct: 109 IWTLVPVLILVAIGAFSLPILFRSQEM-------------PNDPDLVIKAIGHQWYWSYE 155
Query: 156 -----------------------LLPEQQVAIINELVVPIDRPLEFRITASSVMNSFYIP 192
E +A N +VVP+ + + ++TA+ V++++ IP
Sbjct: 156 YPNDGVAFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATDVIHAWTIP 215
Query: 193 GLAGQIYAMAGMETKLHAVMNKKGAYSGFSANYSGRGFSHMRFKFYGKSEKGFEDWISKV 252
A + A+ G +L ++++G Y G + G ++M S++ +E W++
Sbjct: 216 AFAVKQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQEKYEAWLAGA 275
Query: 253 K 253
K
Sbjct: 276 K 276