HHsearch alignment of GI: 254780475 and MMDB domain: 1vq8_3_

>1vq8_3 (3:) 50S ribosomal protein L44E; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=91.40  E-value=0.16  Score=28.21  Aligned_cols=21  Identities=29%  Similarity=0.393  Sum_probs=17.1

Q ss_pred             EEEECCCCCCCEEEEEEEEEC
Q ss_conf             994131744634466886509
Q gi|254780475|r   35 VKNKYDPVIRKHVEFKEGKIK   55 (55)
Q Consensus        35 el~Ky~p~~~kHvl~~E~KiK   55 (55)
                      +.+-|||.|++|+.|+-+..|
T Consensus         6 ~~~tyCp~CkkHt~HkV~qyK   26 (92)
T 1vq8_3            6 RFNTYCPHCNEHQEHEVEKVR   26 (92)
T ss_dssp             EEEEEETTTTEEEEEEEEECC
T ss_pred             CEECCCCCCCCCCCEEEEEEE
T ss_conf             010008364687427999861