HHsearch results for GI: 254780475 and protein with PDBid: 1vq8_3
>1vq8_3 50S ribosomal protein L44E; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.3 PDB: 1jj2_2 1k73_4* 1k8a_4* 1k9m_4* 1kc8_4* 1kd1_4* 1kqs_2* 1m1k_4* 1m90_4* 1n8r_4* 1nji_4* 1q7y_4* 1q81_4* 1q82_4* 1q86_4* 1qvf_2 1qvg_2 1s72_3* 1vq4_3* 1vq5_3* ...
Probab=93.28 E-value=0.046 Score=30.19 Aligned_cols=21 Identities=29% Similarity=0.393 Sum_probs=17.0
Q ss_pred EEEECCCCCCCEEEEEEEEEC
Q ss_conf 994131744634466886509
Q gi|254780475|r 35 VKNKYDPVIRKHVEFKEGKIK 55 (55)
Q Consensus 35 el~Ky~p~~~kHvl~~E~KiK 55 (55)
..+-|||.|++|+.|+=+..|
T Consensus 6 ~~~tyCp~CkkHt~HkV~~~K 26 (92)
T 1vq8_3 6 RFNTYCPHCNEHQEHEVEKVR 26 (92)
T ss_dssp EEEEEETTTTEEEEEEEEECC
T ss_pred CCCCCCCCCCCCCCEEEEEEC
T ss_conf 010109364787436999852