HHsearch alignment for GI: 254780476 and conserved domain: COG4753
>COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].
Probab=99.94 E-value=1.6e-25 Score=167.30 Aligned_cols=119 Identities=32% Similarity=0.537 Sum_probs=110.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHH--HCCCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 8778995399899999999999--7898999-988979999999827998999950412969599999998285768995
Q gi|254780476|r 2 LKKVMIVEDNELNMKLFRDLIE--TSGYIAL-QTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIP 78 (123)
Q Consensus 2 ~kkiLiVDD~~~~~~~l~~~l~--~~g~~v~-~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ip 78 (123)
T Consensus 1 MykVlIVDDE~lIr~GLk~lI~w~~~g~eiVgtA~NG~eAleli~e~~pDiviTDI~MP~mdGLdLI~~ike~--~p~~~ 78 (475)
T COG4753 1 MYKVLIVDDEPLIREGLKSLIDWEALGIEVVGTAANGKEALELIQETQPDIVITDINMPGMDGLDLIKAIKEQ--SPDTE 78 (475)
T ss_pred CEEEEEECCHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCE
T ss_conf 9139996672999999998488563697578751457999999873499789981578887579999999974--99853
Q ss_pred EEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 99999249989999999769988998798989999999997403
Q gi|254780476|r 79 VIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGE 122 (123)
Q Consensus 79 ii~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~ 122 (123)
T Consensus 79 ~IILSGy~eFeYak~Am~lGV~dYLLKP~~k~eL~~~L~ki~~k 122 (475)
T COG4753 79 FIILSGYDEFEYAKKAMKLGVKDYLLKPVDKAELEEALKKIIGK 122 (475)
T ss_pred EEEEECCCHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHH
T ss_conf 99984642058999998618521220769899999999999999