HHsearch alignment for GI: 254780476 and conserved domain: PRK05928
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed.
Probab=90.65 E-value=1.5 Score=23.97 Aligned_cols=115 Identities=17% Similarity=0.207 Sum_probs=67.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEE--C--------CHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCC
Q ss_conf 778995399899999999999789899998--8--------979999999827998999950412969599999998285
Q gi|254780476|r 3 KKVMIVEDNELNMKLFRDLIETSGYIALQT--R--------NGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDS 72 (123)
Q Consensus 3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a--~--------~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~ 72 (123)
T Consensus 127 ~~vL~~~g~-~~~~~L~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~~d~i~ftS~~~v~~~~~~~~~~~~~~ 205 (252)
T PRK05928 127 KRVLYLRGN-GGRPLLGDFLQERGADVDECEVYERKPPKLEGAEELIEELQTGEVDAIIFTSPSMVRAFLSLAPELYRRH 205 (252)
T ss_pred CEEEEEECC-CCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCHH
T ss_conf 879998167-6665789999977984799986576378888279999998628987999909999999999866403025
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHCCCC-EEEECCCCHHHHHHHHHHHHHC
Q ss_conf 7689959999924998999999976998-8998798989999999997403
Q gi|254780476|r 73 ELQEIPVIAVTAFAMKGDEERIRKGGCE-AYISKPISLSIFMETIKKYIGE 122 (123)
Q Consensus 73 ~~~~ipii~~t~~~~~~~~~~~~~~g~~-~~l~KPi~~~~L~~~i~~~l~~ 122 (123)
T Consensus 206 ~~~~~~iv~ig----~~ta~~~~~~G~~~~~~a~~~~~~~lv~al~~~l~~ 252 (252)
T PRK05928 206 WLLRCRAVAIG----KRTAEALKELGVKVVIVPDNADNEALLRALKKSLKK 252 (252)
T ss_pred HHHCCEEEEEC----HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 65188799989----999999998699817984999979999999999619