HHsearch alignment for GI: 254780476 and conserved domain: PRK09468
>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.96 E-value=1e-28 Score=185.68 Aligned_cols=118 Identities=19% Similarity=0.340 Sum_probs=112.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 77899539989999999999978989999889799999998279989999504129695999999982857689959999
Q gi|254780476|r 3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAV 82 (123)
Q Consensus 3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~ 82 (123)
T Consensus 6 ~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~~~~DlvilDi~lp~~dG~~l~~~iR~~~--~~~pII~L 83 (239)
T PRK09468 6 YKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQN--NPTPIIML 83 (239)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHC--CCCCEEEE
T ss_conf 7899990999999999999998899999989999999999758998999878998888734677787505--78778999
Q ss_pred EECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 9249989999999769988998798989999999997403
Q gi|254780476|r 83 TAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGE 122 (123)
Q Consensus 83 t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~ 122 (123)
T Consensus 84 Ta~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allrR 123 (239)
T PRK09468 84 TAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRR 123 (239)
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 4667878999999769868855899989999999999863