HHsearch alignment for GI: 254780476 and conserved domain: PRK09468

>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.96  E-value=1e-28  Score=185.68  Aligned_cols=118  Identities=19%  Similarity=0.340  Sum_probs=112.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf             77899539989999999999978989999889799999998279989999504129695999999982857689959999
Q gi|254780476|r    3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAV   82 (123)
Q Consensus         3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~   82 (123)
T Consensus         6 ~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~~~~DlvilDi~lp~~dG~~l~~~iR~~~--~~~pII~L   83 (239)
T PRK09468          6 YKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQN--NPTPIIML   83 (239)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHC--CCCCEEEE
T ss_conf             7899990999999999999998899999989999999999758998999878998888734677787505--78778999


Q ss_pred             EECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             9249989999999769988998798989999999997403
Q gi|254780476|r   83 TAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIGE  122 (123)
Q Consensus        83 t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~~  122 (123)
T Consensus        84 Ta~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allrR  123 (239)
T PRK09468         84 TAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRR  123 (239)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             4667878999999769868855899989999999999863