HHsearch alignment for GI: 254780476 and conserved domain: PRK09483
>PRK09483 response regulator; Provisional.
Probab=99.89 E-value=1.7e-21 Score=144.26 Aligned_cols=118 Identities=24% Similarity=0.431 Sum_probs=109.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf 877899539989999999999978-98999-9889799999998279989999504129695999999982857689959
Q gi|254780476|r 2 LKKVMIVEDNELNMKLFRDLIETS-GYIAL-QTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPV 79 (123)
Q Consensus 2 ~kkiLiVDD~~~~~~~l~~~l~~~-g~~v~-~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipi 79 (123)
T Consensus 1 Mi~VlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~~~l~~~~~~~pDvvllDl~lp~~~Gl~~~~~i~~~~--p~~~v 78 (216)
T PRK09483 1 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMNMPGIGGLEATRKILRST--PDVKI 78 (216)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHC--CCCCE
T ss_conf 9589998499999999999997489958999989999999999855999999868898987523778887408--99857
Q ss_pred EEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 999924998999999976998899879898999999999740
Q gi|254780476|r 80 IAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIG 121 (123)
Q Consensus 80 i~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~ 121 (123)
T Consensus 79 ivls~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~ 120 (216)
T PRK09483 79 IMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVHS 120 (216)
T ss_pred EEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf 863056632889999974887899479999999999999985