HHsearch alignment for GI: 254780476 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=91.11 E-value=1.3 Score=24.22 Aligned_cols=108 Identities=14% Similarity=0.247 Sum_probs=79.5
Q ss_pred EECCCHHHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHHCCCCEEEEEEEC----C-CCCHHHHHHHHHHCCCCCCCCE
Q ss_conf 953998999999999997898999--98897999999982799899995041----2-9695999999982857689959
Q gi|254780476|r 7 IVEDNELNMKLFRDLIETSGYIAL--QTRNGMEALELARQHKPDVIIMDIQL----Q-EISGLEITKQIKEDSELQEIPV 79 (123)
Q Consensus 7 iVDD~~~~~~~l~~~l~~~g~~v~--~a~~g~eal~~l~~~~~dlillD~~m----p-~~dG~el~~~ir~~~~~~~ipi 79 (123)
T Consensus 993 l~~~~~~~~~~l-~~Lr~lGi~ialDDFGTGySSL~yLk~lPvD~LKID~sFV~~l~~~~~d~~iV~~Ii~la~~Lgl~v 1071 (1116)
T PRK09776 993 LLNHAEAASRLV-QKLRLAGCRVVLDDFGRGLSSFNYLKAFMADYLKIDGELCANLQGNLMDEMLVSIINGIAQRLGMKT 1071 (1116)
T ss_pred HHCCHHHHHHHH-HHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEE
T ss_conf 334999999999-9999789999998997867899999728999899898997175799548999999999999878989
Q ss_pred EEEEECCCHHHHHHHHHCCCCE----EEECCCCHHHHHHHH
Q ss_conf 9999249989999999769988----998798989999999
Q gi|254780476|r 80 IAVTAFAMKGDEERIRKGGCEA----YISKPISLSIFMETI 116 (123)
Q Consensus 80 i~~t~~~~~~~~~~~~~~g~~~----~l~KPi~~~~L~~~i 116 (123)
T Consensus 1072 VA-EGVEt~~ql~~L~~lGcd~~QGY~fsrP~Plee~l~~~ 1111 (1116)
T PRK09776 1072 IA-GPVELPLTLDTLSGIGVDLAQGYVIGRPQPLDLLLNSS 1111 (1116)
T ss_pred EE-CCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCC
T ss_conf 98-68880999999997799988755006478899984455