HHsearch alignment for GI: 254780476 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=99.96 E-value=7.8e-28 Score=180.67 Aligned_cols=117 Identities=25% Similarity=0.459 Sum_probs=112.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 77899539989999999999978989999889799999998279989999504129695999999982857689959999
Q gi|254780476|r 3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAV 82 (123)
Q Consensus 3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~ 82 (123)
T Consensus 6 ~~ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~~~al~~l~~~~~DlvllD~~mp~~~Gl~lL~~l~~~~--p~~pvIvi 83 (441)
T PRK10365 6 IDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALN--PAIPVLIM 83 (441)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHC--CCCCEEEE
T ss_conf 8599983989999999999997799899989999999998648999999889999998999999998429--89828999
Q ss_pred EECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 924998999999976998899879898999999999740
Q gi|254780476|r 83 TAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIG 121 (123)
Q Consensus 83 t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~ 121 (123)
T Consensus 84 T~~~~~~~av~A~k~GA~Dyl~KP~~~~~L~~~i~~al~ 122 (441)
T PRK10365 84 TAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALA 122 (441)
T ss_pred ECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 699998999999982851234078889999999999999