HHsearch alignment for GI: 254780476 and conserved domain: PRK10403

>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.88  E-value=1.6e-21  Score=144.40  Aligned_cols=118  Identities=25%  Similarity=0.439  Sum_probs=108.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf             87789953998999999999997-898999-9889799999998279989999504129695999999982857689959
Q gi|254780476|r    2 LKKVMIVEDNELNMKLFRDLIET-SGYIAL-QTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPV   79 (123)
Q Consensus         2 ~kkiLiVDD~~~~~~~l~~~l~~-~g~~v~-~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipi   79 (123)
T Consensus         6 pirIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~~~pDlvllD~~lp~~~G~~~~~~l~~~~--p~~~i   83 (215)
T PRK10403          6 PFQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDG--VTAQI   83 (215)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCC--CCCCE
T ss_conf             7579998398999999999997589928999989999999998644998999808998998741233565418--87736


Q ss_pred             EEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf             999924998999999976998899879898999999999740
Q gi|254780476|r   80 IAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIG  121 (123)
Q Consensus        80 i~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~  121 (123)
T Consensus        84 ivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~  125 (215)
T PRK10403         84 IILTVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAK  125 (215)
T ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf             886324323678998746876688489999999999999984