HHsearch alignment for GI: 254780476 and conserved domain: PRK10693
>PRK10693 response regulator of RpoS; Provisional.
Probab=99.97 E-value=3.7e-30 Score=194.02 Aligned_cols=118 Identities=25% Similarity=0.443 Sum_probs=110.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 87789953998999999999997898999988979999999827998999950412969599999998285768995999
Q gi|254780476|r 2 LKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIA 81 (123)
Q Consensus 2 ~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~ 81 (123)
T Consensus 7 gkkILIVDDd~~~r~~l~~~L~~~G~~V~~A~nG~eAl~~l~~~~pDLIi~Dl~MP~mdGlell~~lr~~~--~~~PVIv 84 (337)
T PRK10693 7 GKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKFVEHLRNRG--DQTPVLV 84 (337)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHC--CCCEEEE
T ss_conf 99899994999999999999997899999989999999998658999999968999999899999999858--9964999
Q ss_pred EEECCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHH
Q ss_conf 99249989999999769988998798-98999999999740
Q gi|254780476|r 82 VTAFAMKGDEERIRKGGCEAYISKPI-SLSIFMETIKKYIG 121 (123)
Q Consensus 82 ~t~~~~~~~~~~~~~~g~~~~l~KPi-~~~~L~~~i~~~l~ 121 (123)
T Consensus 85 lTa~~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l~ 125 (337)
T PRK10693 85 ISATENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACLY 125 (337)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf 98689999999999749958997896999999999998751