HHsearch alignment for GI: 254780476 and conserved domain: PRK10693

>PRK10693 response regulator of RpoS; Provisional.
Probab=99.97  E-value=3.7e-30  Score=194.02  Aligned_cols=118  Identities=25%  Similarity=0.443  Sum_probs=110.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             87789953998999999999997898999988979999999827998999950412969599999998285768995999
Q gi|254780476|r    2 LKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIA   81 (123)
Q Consensus         2 ~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~   81 (123)
T Consensus         7 gkkILIVDDd~~~r~~l~~~L~~~G~~V~~A~nG~eAl~~l~~~~pDLIi~Dl~MP~mdGlell~~lr~~~--~~~PVIv   84 (337)
T PRK10693          7 GKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKFVEHLRNRG--DQTPVLV   84 (337)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHC--CCCEEEE
T ss_conf             99899994999999999999997899999989999999998658999999968999999899999999858--9964999


Q ss_pred             EEECCCHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHH
Q ss_conf             99249989999999769988998798-98999999999740
Q gi|254780476|r   82 VTAFAMKGDEERIRKGGCEAYISKPI-SLSIFMETIKKYIG  121 (123)
Q Consensus        82 ~t~~~~~~~~~~~~~~g~~~~l~KPi-~~~~L~~~i~~~l~  121 (123)
T Consensus        85 lTa~~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l~  125 (337)
T PRK10693         85 ISATENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACLY  125 (337)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
T ss_conf             98689999999999749958997896999999999998751