HHsearch alignment for GI: 254780476 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.96 E-value=5.4e-29 Score=187.31 Aligned_cols=118 Identities=24% Similarity=0.402 Sum_probs=113.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
Q ss_conf 98778995399899999999999789899998897999999982799899995041296959999999828576899599
Q gi|254780476|r 1 MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVI 80 (123)
Q Consensus 1 m~kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii 80 (123)
T Consensus 1 M~~kILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~~~~DlvilDi~lp~~~G~el~~~iR~~~---~~piI 77 (224)
T PRK10766 1 MSYHILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQNQHVDLILLDINLPGEDGLMLTRELRSRS---TVGII 77 (224)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCC---CCCEE
T ss_conf 997199991999999999999998799999989999999999608999999889999887661376763047---85568
Q ss_pred EEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 99924998999999976998899879898999999999740
Q gi|254780476|r 81 AVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIG 121 (123)
Q Consensus 81 ~~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~ 121 (123)
T Consensus 78 ~lta~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allr 118 (224)
T PRK10766 78 LVTGRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLW 118 (224)
T ss_pred EECCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 63355898999999984941451399988999999999972