HHsearch alignment for GI: 254780476 and conserved domain: PRK11466

>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=99.97  E-value=1.9e-29  Score=189.87  Aligned_cols=117  Identities=18%  Similarity=0.377  Sum_probs=111.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             778995399899999999999789899998897999999982-7998999950412969599999998285768995999
Q gi|254780476|r    3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQ-HKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIA   81 (123)
Q Consensus         3 kkiLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~-~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~   81 (123)
T Consensus       682 lrVLvVEDn~~N~~v~~~~L~~lG~~v~~A~nG~eAle~l~~~~~fDlVLmDi~MP~mDG~eatr~iR~~--~~~~pIIA  759 (912)
T PRK11466        682 LRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDYDGITLARQLAQQ--YPSLVLIG  759 (912)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHC--CCCCCEEE
T ss_conf             8699994878899999999998699899989999999999718998589876999999899999999861--99997899


Q ss_pred             EEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf             9924998999999976998899879898999999999740
Q gi|254780476|r   82 VTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYIG  121 (123)
Q Consensus        82 ~t~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~~~l~  121 (123)
T Consensus       760 lTA~a~~ed~~~~l~aGmd~~L~KPv~~~~L~~~l~~~l~  799 (912)
T PRK11466        760 FSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQ  799 (912)
T ss_pred             ECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHC
T ss_conf             7798788999999976998775498999999999999846