HHsearch alignment for GI: 254780476 and conserved domain: cd02070
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=95.82 E-value=0.16 Score=29.50 Aligned_cols=100 Identities=20% Similarity=0.380 Sum_probs=68.6
Q ss_pred EEEEE----CCCHHHHHHHHHHHHHCCCEEEE--E-CCHHHHHHHHHHCCCCEEEEEEECCCC-CH-HHHHHHHHHCCCC
Q ss_conf 78995----39989999999999978989999--8-897999999982799899995041296-95-9999999828576
Q gi|254780476|r 4 KVMIV----EDNELNMKLFRDLIETSGYIALQ--T-RNGMEALELARQHKPDVIIMDIQLQEI-SG-LEITKQIKEDSEL 74 (123)
Q Consensus 4 kiLiV----DD~~~~~~~l~~~l~~~g~~v~~--a-~~g~eal~~l~~~~~dlillD~~mp~~-dG-~el~~~ir~~~~~ 74 (123)
T Consensus 84 ~vv~~tv~Gd~H~lG~~mv~~~l~~~G~~V~~LG~~vp~e~~v~~~~~~~~divglS~~~~~~~~~~~~~i~~lr~~~~~ 163 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLR 163 (201)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 59996279877389999999999878977997789999799999999729899999625668899999999999972898
Q ss_pred CCCCEEEEEECCCHHHHHHHHHCCCCEEEECC
Q ss_conf 89959999924998999999976998899879
Q gi|254780476|r 75 QEIPVIAVTAFAMKGDEERIRKGGCEAYISKP 106 (123)
Q Consensus 75 ~~ipii~~t~~~~~~~~~~~~~~g~~~~l~KP 106 (123)
T Consensus 164 ~~v~i~v-GG~a~~--~~~a~~~GAD~~a~da 192 (201)
T cd02070 164 DKVKVMV-GGAPVN--QEFADEIGADGYAEDA 192 (201)
T ss_pred CCCEEEE-ECCCCC--HHHHHHHCCCEECCCH
T ss_conf 8985999-880179--9999992988784799