HHsearch alignment for GI: 254780476 and conserved domain: cd02071

>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=95.25  E-value=0.26  Score=28.30  Aligned_cols=107  Identities=17%  Similarity=0.216  Sum_probs=76.1

Q ss_pred             CCCHHHHHHHHHHHHHCCCEEEE---ECCHHHHHHHHHHCCCCEEEEEEECCC-CC-HHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             39989999999999978989999---889799999998279989999504129-69-59999999828576899599999
Q gi|254780476|r    9 EDNELNMKLFRDLIETSGYIALQ---TRNGMEALELARQHKPDVIIMDIQLQE-IS-GLEITKQIKEDSELQEIPVIAVT   83 (123)
Q Consensus         9 DD~~~~~~~l~~~l~~~g~~v~~---a~~g~eal~~l~~~~~dlillD~~mp~-~d-G~el~~~ir~~~~~~~ipii~~t   83 (123)
T Consensus        10 DgHd~G~~iva~~l~d~GfeVi~lG~~~s~eeiv~~A~~e~ad~IglSsL~g~h~~~~~~l~~~L~e~G-~~di~v~-vG   87 (122)
T cd02071          10 DGHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELG-AGDILVV-GG   87 (122)
T ss_pred             CHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC-CCCCEEE-EE
T ss_conf             622877999999999789769967998899999999997399899996465544789999999999769-9984699-94


Q ss_pred             ECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf             2499899999997699889987989899999999
Q gi|254780476|r   84 AFAMKGDEERIRKGGCEAYISKPISLSIFMETIK  117 (123)
Q Consensus        84 ~~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~  117 (123)
T Consensus        88 G~Ip~~d~~~l~~~Gv~~vf~pgt~~~~iv~~i~  121 (122)
T cd02071          88 GIIPPEDYELLKEMGVAEIFGPGTSIEEIIDKIR  121 (122)
T ss_pred             CCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
T ss_conf             5649899999997799889895889999999975