HHsearch alignment for GI: 254780476 and conserved domain: pfam00072
>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=99.97 E-value=4.3e-29 Score=187.89 Aligned_cols=111 Identities=33% Similarity=0.656 Sum_probs=107.2
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 89953998999999999997898999988979999999827998999950412969599999998285768995999992
Q gi|254780476|r 5 VMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGLEITKQIKEDSELQEIPVIAVTA 84 (123)
Q Consensus 5 iLiVDD~~~~~~~l~~~l~~~g~~v~~a~~g~eal~~l~~~~~dlillD~~mp~~dG~el~~~ir~~~~~~~ipii~~t~ 84 (123)
T Consensus 1 ILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~~~dlvi~Di~mP~~dG~el~~~ir~~~--~~~piI~~T~ 78 (111)
T pfam00072 1 VLIVDDDPLIRELLRQLLEKEGYVVAEADDGEEALELLKEKRPDLILLDIRMPGMDGLELLRRIRRRP--PTTPVIVLTA 78 (111)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCC--CCCEEEEEEC
T ss_conf 09998989999999999998899999989999999999847998999953689950157999997359--9980999975
Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf 499899999997699889987989899999999
Q gi|254780476|r 85 FAMKGDEERIRKGGCEAYISKPISLSIFMETIK 117 (123)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~l~KPi~~~~L~~~i~ 117 (123)
T Consensus 79 ~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~ir 111 (111)
T pfam00072 79 HGDEEDAVEALKAGANDFLSKPFDPEELVAALR 111 (111)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHCC
T ss_conf 089999999997798779949999899998529