RPSBLAST alignment for GI: 254780476 and conserved domain: COG3707

>gnl|CDD|33502 COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]. Length = 194

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 4/117 (3%)

Query: 1   MLKKVMIVEDNELNMKLFRDLIETSGYIAL-QTRNGMEALELARQHKPDVIIMDIQLQEI 59
           ML +V++ +D  L     R+ +  +GY  + +  +G+EA+E+  + +PDV+I+DI   E+
Sbjct: 4   MLLRVLVADDEALTRMDIREGLLEAGYQRVGEAADGLEAVEVCERLQPDVVILDI---EM 60

Query: 60  SGLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETI 116
              +I + +   SE    P++A+TA++     E   + G  AYI KP+  S  +  +
Sbjct: 61  PRRDIIEALLLASENVARPIVALTAYSDPALIEAAIEAGVMAYIVKPLDESRLLPIL 117