RPSBLAST alignment of GI: 254780476 and protein with PDBid: 3cfy
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} Length = 137
Score = 77.1 bits (189), Expect = 1e-15
Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 1 MLKKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEIS 60
+ +V++VED+ L++ ++ Y G +A++ + KP +II+D++L ++S
Sbjct: 3 LRPRVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERSKPQLIILDLKLPDMS 62
Query: 61 GLEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120
G ++ I ++ VI TA + + G E ++ KPI+ ++ ++
Sbjct: 63 GEDVLDWINQND--IPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHL 120