RPSBLAST alignment of GI: 254780476 and protein with PDBid: 3dzd

>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Length = 368

 Score = 84.1 bits (208), Expect = 7e-18
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 2/118 (1%)

Query: 3   KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALELARQHKPDVIIMDIQLQEISGL 62
           K+V++V+D E        ++E  GY     +   EA +  ++    VI++D+ + +  G+
Sbjct: 1   KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGV 60

Query: 63  EITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120
                IKE+S   +  VI +T         +  K G   ++ KP S+  F+ TIK   
Sbjct: 61  NFIDFIKENS--PDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAF 116