RPSBLAST alignment of GI: 254780476 and protein with PDBid: 3hdv
>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440} Length = 136
Score = 84.2 bits (208), Expect = 7e-18
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 3 KKVMIVEDNELNMKLFRDLIETSGYIALQTRNGMEALE-LARQHKPDVIIMDIQLQEISG 61
V++V+DN +N + +++ G A+ EA L Q + ++I D+++Q SG
Sbjct: 8 PLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESG 67
Query: 62 LEITKQIKEDSELQEIPVIAVTAFAMKGDEERIRKGGCEAYISKPISLSIFMETIKKYI 120
L++ + I+ E + +I V+ + + G ++ KP+ L +E + K +
Sbjct: 68 LDLIRTIRAS-ERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKEL 125