HHsearch alignment for GI: 254780477 and conserved domain: cd03002
>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein. MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.
Probab=93.00 E-value=0.15 Score=29.86 Aligned_cols=32 Identities=13% Similarity=0.321 Sum_probs=25.0
Q ss_pred HHHCCCCCCCEEEE--CCEE--------ECCCCCHHHHHHHH
Q ss_conf 98618853657998--9899--------61899999999999
Q gi|254780477|r 191 SEDFAIDSTPVFFI--GGNL--------YLGDMSEGVFSKII 222 (232)
Q Consensus 191 ~~~~gi~gTPt~~V--nG~~--------~~g~~~~~~~~~~i 222 (232)
T Consensus 67 ~~~~~I~~~PTi~~f~~G~~~~k~~~~~y~G~Rt~~~i~~Fi 108 (109)
T cd03002 67 CGKYGVQGFPTLKVFRPPKKASKHAVEDYNGERSAKAIVDFV 108 (109)
T ss_pred HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 987698448879999596404777862557888999999965