HHsearch alignment for GI: 254780477 and conserved domain: cd03008
>cd03008 TryX_like_RdCVF Tryparedoxin (TryX)-like family, Rod-derived cone viability factor (RdCVF) subfamily; RdCVF is a thioredoxin (TRX)-like protein specifically expressed in photoreceptors. RdCVF was isolated and identified as a factor that supports cone survival in retinal cultures. Cone photoreceptor loss is responsible for the visual handicap resulting from the inherited disease, retinitis pigmentosa. RdCVF shows 33% similarity to TRX but does not exhibit any detectable thiol oxidoreductase activity.
Probab=94.77 E-value=0.23 Score=28.61 Aligned_cols=32 Identities=13% Similarity=0.286 Sum_probs=24.5
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 89888899997058882064433421134432
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLED 93 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~ 93 (232)
T Consensus 22 ~L~GKvVgLYFSA~WCpPCr~FTP~L~~fY~~ 53 (146)
T cd03008 22 RLENRVLLLFFGAVVSPQCQLFAPKLKDFFVR 53 (146)
T ss_pred HCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 81899999997478681487677899999999