HHsearch alignment for GI: 254780477 and conserved domain: pfam01323
>pfam01323 DSBA DSBA-like thioredoxin domain. This family contains a diverse set of proteins with a thioredoxin-like structure pfam00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyse one step in prokaryotic polyaromatic hydrocarbon (PAH) catabolic pathways. This family also contains members with functions other than HCCA isomerisation, such as Kappa family GSTs, whose similarity to HCCA isomerases was not previously recognized. One member from Pseudomonas putida has been annotated as a dioxygenase but is almost certainly an HCCA isomerase enzyme. Similarly, a member from Pseudomonas stutzeri has been annotated as a dehydrogenase, but is most probably also an HCCA isomerase enzyme. In addition, a member from Rhizobium leguminosarum has been annotated as a putative glycerol-3-phosphate transfer protein, but is also most likely to be an HCCA isomerase enzyme.
Probab=99.75 E-value=7.5e-17 Score=126.52 Aligned_cols=150 Identities=18% Similarity=0.259 Sum_probs=113.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCH----------------------------------
Q ss_conf 9999705888206443342113443200002037998433234302----------------------------------
Q gi|254780477|r 68 TMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSV---------------------------------- 113 (232)
Q Consensus 68 ~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 113 (232)
T Consensus 1 TId~y~D~~cP~~yl~~~~l~~~~~~~~-~---v~i~~~pf~L~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~g~~~~ 76 (191)
T pfam01323 1 TVDEFFDFLCPFCYLAKERLEKLAARYG-D---VKVVYRPFPLAGAKKIGNVGPSNLPVKLKYMMADLERWAALYGIPLR 76 (191)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCC-C---CEEEEEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9799984888789999999999998769-9---55999962045545557899112799999999999999998489867
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH
Q ss_conf ------45777666666665321245588888865433211345689987643110000688986405989999999999
Q gi|254780477|r 114 ------STVAVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGK 187 (232)
Q Consensus 114 ------~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 187 (232)
T Consensus 77 ~~~~~~~~t~~a~~~~~~a~~~~~~~~~~~~l~~a~~~~g~~i~d~~~L~~~a~~~Gld~~~~~~~~~~~~~~~~l~~~~ 156 (191)
T pfam01323 77 FPANFLGNSTRANRLALAAGAEGLAEKVVRELFNALWGEGAAITDDSVLREVAEKAGLDAEEFDEFLDSPAVKEAVRENT 156 (191)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99888887078999999998647699999999999885133714678999999872999999999863168999999999
Q ss_pred HHHHHHCCCCCCCEEEECCEEECCCCCHHHHHHHH
Q ss_conf 99998618853657998989961899999999999
Q gi|254780477|r 188 KRASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKII 222 (232)
Q Consensus 188 ~~~~~~~gi~gTPt~~VnG~~~~g~~~~~~~~~~i 222 (232)
T Consensus 157 ~~a-~~~gv~GvPtfvi~~~~~~G~d~~e~~~~~L 190 (191)
T pfam01323 157 AAA-ISLGVFGVPTFVVGGKMVFGADRLDTLADAL 190 (191)
T ss_pred HHH-HHCCCEECCEEEECCEEEECCCCHHHHHHHH
T ss_conf 999-9859903687999999884899899999975