HHsearch results for GI: 254780477 and protein with PDBid: 2h30_A
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.31 E-value=0.00085 Score=42.63 Aligned_cols=116 Identities=13% Similarity=0.170 Sum_probs=60.2
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89888899997058882064433421134432000020379984332343024577766666666532124558888886
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFN 141 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
.-..+++|+.|+...||+|....+.+..+.+++......+..+ ..+.......... .... +.
T Consensus 35 ~~kgK~vvl~Fwa~wC~~C~~e~p~l~~l~~~~~~~~~~vv~v--~~~~~~~~~~~~~---------------~~~~-~~ 96 (164)
T 2h30_A 35 LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITV--ASPGFLHEKKDGE---------------FQKW-YA 96 (164)
T ss_dssp CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEE--ECTTSTTCCCTTH---------------HHHH-HT
T ss_pred HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE--EEECCCCHHHHHH---------------HHHH-HH
T ss_conf 8098879999998989869999999999998743540589998--6521442145788---------------8877-66
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCCCH
Q ss_conf 543321134568998764311000068898640598999999999999998618853657998---9899---6189999
Q gi|254780477|r 142 KQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDMSE 215 (232)
Q Consensus 142 ~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~~~ 215 (232)
... .. .+ ....+. +. ...+.+||.++|+++| +|+. +.|..+.
T Consensus 97 ~~~-~~----------~~--p~~~D~--------~~-----------~l~~~~gi~~~P~~~lid~~G~I~~~~~G~~~~ 144 (164)
T 2h30_A 97 GLN-YP----------KL--PVVTDN--------GG-----------TIAQNLNISVYPSWALIGKDGDVQRIVKGSINE 144 (164)
T ss_dssp TSC-CT----------TS--CEEECT--------TC-----------HHHHHTTCCSSSEEEEECTTSCEEEEEESCCCH
T ss_pred HHC-CC----------CC--CEECCC--------HH-----------HHHHHCCCCCCCEEEEECCCCEEEEEEECCCCH
T ss_conf 502-55----------54--142063--------36-----------799984998038899997999799999689999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780477|r 216 GVFSKIIDSMIQ 227 (232)
Q Consensus 216 ~~~~~~id~ll~ 227 (232)
++++++|+.+.+
T Consensus 145 ~~i~~~l~~~~~ 156 (164)
T 2h30_A 145 AQALALIRNPNA 156 (164)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999