HHsearch results for GI: 254780477 and protein with PDBid: 3dml_A
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.62 E-value=1.6e-07 Score=66.19 Aligned_cols=93 Identities=13% Similarity=0.213 Sum_probs=62.1
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8988889999705888206443342113443200-002037998433234302457776666666653212455888888
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKY-IKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLF 140 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 140 (232)
+..+++.++.|+...||||+++++++.+..++.. .....+.++-
T Consensus 15 ~~~~~~~Lv~F~a~~Cp~Ck~~~~~i~~~~~~~~~~~~~~i~~v~----------------------------------- 59 (116)
T 3dml_A 15 DDKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQ----------------------------------- 59 (116)
T ss_dssp ----CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEE-----------------------------------
T ss_pred HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE-----------------------------------
T ss_conf 113684899998999843787468888776552551268538998-----------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE--CCE---EECCCCCH
Q ss_conf 6543321134568998764311000068898640598999999999999998618853657998--989---96189999
Q gi|254780477|r 141 NKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI--GGN---LYLGDMSE 215 (232)
Q Consensus 141 ~~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V--nG~---~~~g~~~~ 215 (232)
++.. .+ ...+.+++|.|||||++ ||+ .+.|..+.
T Consensus 60 ------------------------vd~~------~~-----------~~l~~~~~V~g~PT~i~~~~G~~v~r~~Gy~~~ 98 (116)
T 3dml_A 60 ------------------------MRDP------LP-----------PGLELARPVTFTPTFVLMAGDVESGRLEGYPGE 98 (116)
T ss_dssp ------------------------TTSC------CC-----------TTCBCSSCCCSSSEEEEEETTEEEEEEECCCCH
T ss_pred ------------------------ECCC------CC-----------HHHHHHCCCCCCCEEEEEECCEEEEEECCCCCH
T ss_conf ------------------------1476------69-----------889998697358848986399996356699999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999860
Q gi|254780477|r 216 GVFSKIIDSMIQDST 230 (232)
Q Consensus 216 ~~~~~~id~ll~~~~ 230 (232)
+.|..+|+.+|+++.
T Consensus 99 e~F~~~L~~~l~~~~ 113 (116)
T 3dml_A 99 DFFWPMLARLIGQAE 113 (116)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999984138