HHsearch results for GI: 254780477 and protein with PDBid: 3f9u_A
>3f9u_A Putative exported cytochrome C biogenesis- related protein; structural genomics, PSI-2, protein structure initiative; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.12 E-value=0.00053 Score=43.91 Aligned_cols=41 Identities=10% Similarity=0.308 Sum_probs=32.4
Q ss_pred HHHCCCCCCCEEEE---CCEEE---CCC-CCHHHHHHHHHHHHHHHHC
Q ss_conf 98618853657998---98996---189-9999999999999998603
Q gi|254780477|r 191 SEDFAIDSTPVFFI---GGNLY---LGD-MSEGVFSKIIDSMIQDSTR 231 (232)
Q Consensus 191 ~~~~gi~gTPt~~V---nG~~~---~g~-~~~~~~~~~id~ll~~~~~ 231 (232)
.+++||+|+||++| ||+.+ .|. .+.+.|...|+..|++-+|
T Consensus 123 ~~~y~v~g~Pt~v~id~~Gkii~~~~G~~~~~~~f~~~L~~~l~~~~~ 170 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENYRK 170 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 997388886569999999989505557888999999999999999850