HHsearch results for GI: 254780477 and protein with PDBid: 3fkf_A
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.47 E-value=0.00045 Score=44.38 Aligned_cols=113 Identities=8% Similarity=0.132 Sum_probs=60.7
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88889999705888206443342113443200002037998433234302457776666666653212455888888654
Q gi|254780477|r 64 DAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFNKQ 143 (232)
Q Consensus 64 ~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~q 143 (232)
..+++|+.|+.-.||+|....+.+.....++..+ ..+.++..... ........ ......
T Consensus 32 ~gk~vvl~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~--~~~~~~~~------------------~~~~~~ 90 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLD--IDREAWET------------------AIKKDT 90 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECC--SCHHHHHH------------------HHHHTT
T ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHC-CEEEEEEEECC--CCHHHHHH------------------HHHHHC
T ss_conf 9998999999999998422255489999986116-51689985258--89899999------------------999809
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEEECCCCCHHHHHH
Q ss_conf 3321134568998764311000068898640598999999999999998618853657998---9899618999999999
Q gi|254780477|r 144 DDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNLYLGDMSEGVFSK 220 (232)
Q Consensus 144 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~~~g~~~~~~~~~ 220 (232)
..+.. + .... . ......+.|||.++|+++| +|+.+......+++..
T Consensus 91 ~~~~~----------~---~~~~----------~--------~~~~~~~~y~v~~~P~~~liDk~G~Iv~~~~~g~~~~~ 139 (148)
T 3fkf_A 91 LSWDQ----------V---CDFT----------G--------LSSETAKQYAILTLPTNILLSPTGKILARDIQGEALTG 139 (148)
T ss_dssp CCSEE----------E---CCSC----------G--------GGCHHHHHTTCCSSSEEEEECTTSBEEEESCCHHHHHH
T ss_pred CCCCE----------E---EECC----------C--------HHHHHHHHCCCCCCCEEEEECCCCEEEEEECCHHHHHH
T ss_conf 99868----------8---7457----------6--------16789998698804689999899989999788178599
Q ss_pred HHHHHHHH
Q ss_conf 99999998
Q gi|254780477|r 221 IIDSMIQD 228 (232)
Q Consensus 221 ~id~ll~~ 228 (232)
.|+++|+.
T Consensus 140 ~l~~ll~~ 147 (148)
T 3fkf_A 140 KLKELLKT 147 (148)
T ss_dssp HHHHHC--
T ss_pred HHHHHHCC
T ss_conf 99999746