HHsearch results for GI: 254780477 and protein with PDBid: 3or5_A
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum}
Probab=97.68 E-value=0.00021 Score=46.51 Aligned_cols=117 Identities=15% Similarity=0.248 Sum_probs=63.1
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89888899997058882064433421134432000020379984332343024577766666666532124558888886
Q gi|254780477|r 62 QKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTVAVMLARCAEKRMDGGYWGFVSLLFN 141 (232)
Q Consensus 62 ~~~A~v~ivef~D~~Cp~C~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
+-..+++|+.|+...||+|....+.+....+++ .+.+ +.++.... ....
T Consensus 31 ~~~Gk~vvl~F~~~~C~~C~~~~~~l~~~~~~~-~~~~-v~~v~v~~--d~~~--------------------------- 79 (165)
T 3or5_A 31 SLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTW-ASRG-FTFVGIAV--NEQL--------------------------- 79 (165)
T ss_dssp GGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHH-TTTT-EEEEEEEC--SCCH---------------------------
T ss_pred HHCCCEEEEEEEECCCCCCCCCCCHHHHCCCCC-CCCC-EEEEECCC--CHHH---------------------------
T ss_conf 979997999999179997121270344101233-3310-15762122--1037---------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE---CCEE---ECCCCCH
Q ss_conf 543321134568998764311000068898640598999999999999998618853657998---9899---6189999
Q gi|254780477|r 142 KQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLNDQNILDDIKAGKKRASEDFAIDSTPVFFI---GGNL---YLGDMSE 215 (232)
Q Consensus 142 ~q~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~gi~gTPt~~V---nG~~---~~g~~~~ 215 (232)
+.+..+.+..+.. +.......... ... .....+|++|+|+.+| ||+. +.|..+.
T Consensus 80 ------------~~~~~~~~~~~~~---~~~~~~~~~~~----~~~-~~~~~~~v~~~P~~~iId~~G~I~~~~~G~~~~ 139 (165)
T 3or5_A 80 ------------PNVKNYMKTQGII---YPVMMATPELI----RAF-NGYIDGGITGIPTSFVIDASGNVSGVIVGPRSK 139 (165)
T ss_dssp ------------HHHHHHHHHHTCC---SCEEECCHHHH----HHH-HTTSTTCSCSSSEEEEECTTSBEEEEECSCCCH
T ss_pred ------------HHHHHHHHHHCCC---CCEEECCHHHH----HHH-HHHHHCCCCCCCEEEEECCCCEEEEEEECCCCH
T ss_conf ------------9999999995998---72786188898----876-667653844246799998999799999699999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999986
Q gi|254780477|r 216 GVFSKIIDSMIQDS 229 (232)
Q Consensus 216 ~~~~~~id~ll~~~ 229 (232)
+++.++|+.+|...
T Consensus 140 ~~l~~~i~~~l~~~ 153 (165)
T 3or5_A 140 ADFDRIVKMALGAK 153 (165)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999999971887