RPSBLAST alignment of GI: 254780477 and protein with PDBid: 3gyk
>3gyk_A 27KDA outer membrane protein; APC61738.2, thioredoxin-like, oxidoreductase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.76A {Silicibacter pomeroyi dss-3} Length = 175
Score = 91.8 bits (227), Expect = 1e-19
Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 11/167 (6%)
Query: 57 DVSIGQKDAPVTMVEYASMTCFHCAEFHNKTFKYLEDKYIKTGKLRYILREFPLDSVSTV 116
+G + VT+VE+ C +C ++ +R + RE+P+ +
Sbjct: 14 APVLGNPEGDVTVVEFFDYNCPYCRRAM----AEVQGLVDADPNVRLVYREWPILGEGSD 69
Query: 117 AVMLARCAEKRMDGGYWGFVSLLFNKQDDWINSKNYRDALLNMAKFAGFSKNDFDTCLND 176
A R G Y F L +L +A+ G +
Sbjct: 70 FAARAAL-AARQQGKYEAFHWALMGMSGKA-----NETGVLRIAREVGLDTEQLQRDMEA 123
Query: 177 QNILDDIKAGKKRASEDFAIDSTPVFFIGGNLYLGDMSEGVFSKIID 223
+ I A + + TP F + L G + + +D
Sbjct: 124 PEVTAHIAQSMALA-QKLGFNGTPSFVVEDALVPGFVEQSQLQDAVD 169