HHsearch alignment for GI: 254780478 and conserved domain: PRK00111

Probab=99.68  E-value=1e-16  Score=123.45  Aligned_cols=94  Identities=22%  Similarity=0.261  Sum_probs=77.0

Q ss_pred             CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCEEEEEECC-CHHHHH
Q ss_conf             1189889999999998405468899962666310899943111213305544444333456788379999359-069999
Q gi|254780478|r    2 IHFSQVIDDLLDPFLRRRAGISMSLVSAWSEIVGSNIARCCRPEKIIWPNRTSIERQDISSDVSGTLIIACEG-SHALFL   80 (161)
Q Consensus         2 ~~ls~ll~~~i~~~~~krg~~~~~l~~~W~~IVG~~~A~~~~P~ki~~~~~~~~~~~~~~~~~~g~L~i~v~~-~~a~el   80 (161)
T Consensus        65 ~~lGa~~~rlI~~RGW~~~vA~G~V~~~W~~IVG~eIA~H~~P~s~~----------------DG~L~V~~dSTAWATQL  128 (178)
T PRK00111         65 ESLGSVLNKEIQRRGWGKDIAGGWVTSNWEELVGAKIAQHTRVEMIK----------------DKKLFITCDSTAWATNL  128 (178)
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCEEHHCCCHHHHCHHHHCCCCEEEEE----------------CCEEEEEECCHHHHHHH
T ss_conf             76789999999975986564411031362366595665347315751----------------88799996888999999


Q ss_pred             HHHHHHHHHHHHHHHCHHHHHEEEEEECCCCC
Q ss_conf             99899999999986273100025778557784
Q gi|254780478|r   81 MHDQSKIIRNVNIFFGFCAIKRIRFLQRSMSI  112 (161)
Q Consensus        81 ~~~~~~Ii~riN~~~G~~aI~~I~~~q~~~~~  112 (161)
T Consensus       129 RlL~~~LL~~I~~~lG~~vV~~I~V-~GP~aP  159 (178)
T PRK00111        129 RMMQRQILQVIAEKVGPNIITELRI-FGPQAP  159 (178)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEE-ECCCCC
T ss_conf             9999999999998838984689999-898999