HHsearch alignment for GI: 254780479 and conserved domain: COG1059

Probab=92.42  E-value=0.22  Score=30.20  Aligned_cols=90  Identities=23%  Similarity=0.303  Sum_probs=61.6

Q ss_pred             HHHHCCCHHHHHHHHHCC--CHHH-HHHHHHHHHHHH------HHCCCCCCCC-HHHHHH-HHHHHHHHHHHHHH-HHHC
Q ss_conf             898729989999997404--6345-889998776754------3005786873-145688-88877787766776-6434
Q gi|254780479|r   72 FCLSSAKDEEILSAWAGL--GYYT-RARNLKKCADII------VKKYEGNFPH-KVEILK-KLPGIGDYTASAIV-AIAF  139 (356)
Q Consensus        72 ~~la~a~~~~vl~~w~gL--Gyy~-Rar~l~~~a~~i------~~~~~g~~P~-~~~~l~-~LpGiG~yta~ai~-s~a~  139 (356)
T Consensus        66 ~gfly~~~eEL~e~Lk~~g~Rf~n~raeyIVeaR~~~~~lk~~v~--~~~~~~vaRE~Lv~nikGiGyKEASHFLRNVG~  143 (210)
T COG1059          66 DGFLYLSEEELREKLKEVGYRFYNVRAEYIVEAREKFDDLKIIVK--ADENEKVARELLVENIKGIGYKEASHFLRNVGF  143 (210)
T ss_pred             CCCCCCCHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
T ss_conf             331028899999999981601224245999999998877899882--674267899999997015537999999995471


Q ss_pred             CCEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf             9631312431466657651975457
Q gi|254780479|r  140 NHFAVVVDTNIERIISRYFDIIKPA  164 (356)
Q Consensus       140 ~~~~~~vD~Nv~RVl~R~~~~~~~~  164 (356)
T Consensus       144 -~D~AIlDrHIlr~l~r~g~i~e~~  167 (210)
T COG1059         144 -EDLAILDRHILRWLVRYGLIDENP  167 (210)
T ss_pred             -HHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             -689999999999999836523474