HHsearch alignment for GI: 254780479 and conserved domain: COG2231
>COG2231 Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].
Probab=99.62 E-value=1.3e-14 Score=123.33 Aligned_cols=178 Identities=23% Similarity=0.361 Sum_probs=140.1
Q ss_pred CHHHHHHHHHHHHHCCHHHCCHHHHHHHHH-CCCHHHHHCCCHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHCCC---CC
Q ss_conf 704676644673116120332658998774-89978987299899999974046345-88999877675430057---86
Q gi|254780479|r 38 SPYKVWISEIMLQQTTVKTVEPYFKKFMQK-WPTIFCLSSAKDEEILSAWAGLGYYT-RARNLKKCADIIVKKYE---GN 112 (356)
Q Consensus 38 ~py~v~vseimlqqT~v~~v~~~~~~~~~~-~P~~~~la~a~~~~vl~~w~gLGyy~-Rar~l~~~a~~i~~~~~---g~ 112 (356)
T Consensus 29 ~~~EiiigAILtQNT~WknvekAlenLk~~~~~~l~~I~~~~~~~L~elIrpsGFYnqKa~rLk~l~k~l~~~~~~~~~~ 108 (215)
T COG2231 29 NKDEIIIGAILTQNTSWKNVEKALENLKNEGILNLKKILKLDEEELAELIRPSGFYNQKAKRLKALSKNLAKFFINLESF 108 (215)
T ss_pred CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 72068998898524529999999999988156799998458999999987042408999999999999999986423111
Q ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC--HHHHHH
Q ss_conf 873-14568888877787766776643496313124314666576519754573568999874102578522--678999
Q gi|254780479|r 113 FPH-KVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKPAPLYHKTIKNYARKITSTSR--PGDFVQ 189 (356)
Q Consensus 113 ~P~-~~~~l~~LpGiG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~~~~~~~~~~k~l~~~~~~~~~~~~--~~~~nQ 189 (356)
T Consensus 109 ~~~~~R~~LL~iKGIG~ETaDsILlYa~~rp~FVvD~YtrR~l~rlg~i~~k-~--ydeik~~fe~~l~~~~~lyqe~HA 185 (215)
T COG2231 109 KSEVLREELLSIKGIGKETADSILLYALDRPVFVVDKYTRRLLSRLGGIEEK-K--YDEIKELFEENLPENLRLYQEFHA 185 (215)
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC-C--HHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 5188999987268866223999999980486446329999999994551025-4--999999998535067999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 999998632041235643110000013431
Q gi|254780479|r 190 AMMDLGALICTSNKPLCPLCPIQKNCLTFS 219 (356)
Q Consensus 190 AlMdlGa~iC~p~~P~C~~Cpl~~~C~~~~ 219 (356)
T Consensus 186 lIv~~~K~f~~k~-~~~~~cpL~~~~~~~~ 214 (215)
T COG2231 186 LIVEHAKHFCKKK-PLCEKCPLKEKCKKYR 214 (215)
T ss_pred HHHHHHHHHCCCC-CCCCCCHHHHHHHHCC
T ss_conf 9999999981588-6778765899875226