HHsearch alignment for GI: 254780479 and conserved domain: PRK13910

>PRK13910 DNA glycosylase MutY; Provisional.
Probab=100.00  E-value=0  Score=684.27  Aligned_cols=285  Identities=30%  Similarity=0.503  Sum_probs=248.6

Q ss_pred             HHHHHCCHHHCCH-HHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             6731161203326-589987748997898729989999997404634588999877675430057868731456888887
Q gi|254780479|r   47 IMLQQTTVKTVEP-YFKKFMQKWPTIFCLSSAKDEEILSAWAGLGYYTRARNLKKCADIIVKKYEGNFPHKVEILKKLPG  125 (356)
Q Consensus        47 imlqqT~v~~v~~-~~~~~~~~~P~~~~la~a~~~~vl~~w~gLGyy~Rar~l~~~a~~i~~~~~g~~P~~~~~l~~LpG  125 (356)
T Consensus         1 iMLQQTqv~tvip~y~~~f~~~fP~~~~la~a~~~~vl~~W~GLGYY~RArnl~~~a~~i~~~~~g~~P~~~~~L~~LPG   80 (290)
T PRK13910          1 VMSQQTQINTVVERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLKLPG   80 (290)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
T ss_conf             96885742100578999999988399999778999999998746848999999999999999838989852999975889


Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             77877667766434963131243146665765197545735689998741025785226789999999986320412356
Q gi|254780479|r  126 IGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKPAPLYHKTIKNYARKITSTSRPGDFVQAMMDLGALICTSNKPL  205 (356)
Q Consensus       126 iG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~~~~~~~~~~k~l~~~~~~~~~~~~~~~~nQAlMdlGa~iC~p~~P~  205 (356)
T Consensus        81 IG~yTA~AI~siaf~~~~~~vDgNv~RVl~R~~~~~~~~~--~k~~~~~~~~~~~~~~~~~~nqalMdlGa~iC~pk-P~  157 (290)
T PRK13910         81 IGAYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIH--AKDLQIKANDFLNLNESFNHNQALIDLGALICSPK-PK  157 (290)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCHHEEEEHHHCCCCCCC--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC-CC
T ss_conf             9826999999986476332000452014102324789946--69999999982595422689999998633343799-99


Q ss_pred             CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             43110000013431011001234432222221123200034137605776457201320474421111346721588863
Q gi|254780479|r  206 CPLCPIQKNCLTFSEGKSHLLGINTIKKKRPMRTGAVFIAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTH  285 (356)
Q Consensus       206 C~~Cpl~~~C~~~~~~~~~~~P~kk~KKkk~~r~~~~~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~  285 (356)
T Consensus       158 C~~CPl~~~C~a~--~~~~~~~~kkkkk~~~~~-~~~~~-i~~~~~ilL~k~-~~~~~~Glw~fP~~ke~~~--------  224 (290)
T PRK13910        158 CAICPFNPYCLGK--NHPEKHTLKKKQEIIQEE-RYLGV-VIQNNQIALEKI-EQKLYLGMHHFPNLKENLE--------  224 (290)
T ss_pred             CCCCCCHHHHHCC--CCCCCCCCCCCCCCCCCE-EEEEE-EEECCEEEEEEC-CCCCCCCCCCCCCCCCCCC--------
T ss_conf             8779795552315--876446888887677620-69999-998999999817-8866677665999875556--------


Q ss_pred             CCCCCCCCEECCCEEEEEEEEEEEEEEEEEECCCCCCCCCCEEECHHHHHHCCCCHHHHHHHHHCCCCC
Q ss_conf             010100002137358998315999999999807767667813322788874799878999998448237
Q gi|254780479|r  286 SAPFTANWILCNTITHTFTHFTLTLFVWKTIVPQIVIIPDSTWHDAQNLANAALPTVMKKALSAGGIKV  354 (356)
Q Consensus       286 ~~~~~~~~~~l~~ikH~fTH~~L~i~v~~~~~~~~~~~~~~~Wv~~~el~~~~LPs~~kKIL~alg~~~  354 (356)
T Consensus       225 -----~~~~~l~~ikH~fTH~kl~i~v~~~~~k~~--~~~~~W~~l~el~~l~lps~~kKIL~~Lk~~~  286 (290)
T PRK13910        225 -----FKLPFLGAIKHSHTKFKLNLNLYLAAIKDL--KNPIRFYSLKDLETLPISSMTLKILNFLKQKN  286 (290)
T ss_pred             -----CCHHHHHHCEEEEEEEEEEEEEEEEHHHCC--CCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHC
T ss_conf             -----540233000001565779999998541058--98774316777520889828999999997745