HHsearch alignment for GI: 254780479 and conserved domain: TIGR00575

>TIGR00575 dnlj DNA ligase, NAD-dependent; InterPro: IPR001679 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose. It is active during DNA replication, DNA repair and DNA recombination. There are two forms of DNA ligase: one requires ATP (6.5.1.1 from EC), the other NAD (6.5.1.2 from EC). This family is predominantly composed of NAD-dependent bacterial DNA ligases. They are proteins of about 75 to 85 Kd whose sequence is well conserved , . They also show similarity to yicF, an Escherichia coli hypothetical protein of 63 Kd.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair.
Probab=90.20  E-value=0.46  Score=28.00  Aligned_cols=22  Identities=27%  Similarity=0.374  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1456888887778776677664
Q gi|254780479|r  116 KVEILKKLPGIGDYTASAIVAI  137 (356)
Q Consensus       116 ~~~~l~~LpGiG~yta~ai~s~  137 (356)
T Consensus       562 ~~s~L~~~~g~G~~vA~~~~~~  583 (706)
T TIGR00575       562 DRSELLSVEGVGPKVAESIVNF  583 (706)
T ss_pred             CCHHHHHCCCCHHHHHHHHHHH
T ss_conf             6055641014027899999998