HHsearch alignment for GI: 254780479 and conserved domain: TIGR00588
>TIGR00588 ogg 8-oxoguanine DNA-glycosylase (ogg); InterPro: IPR004577 All proteins in this family for which functions are known are 8-oxo-guanaine DNA glycosylases that function in base excision repair. The enzyme incises DNA at 8-oxoG residues, and excises 7,8-dihydro-8-oxoguanine from damaged DNA. It has beta-lyase activity that nicks DNA 3' to the lesion.; GO: 0008534 oxidized purine base lesion DNA N-glycosylase activity, 0006281 DNA repair, 0005634 nucleus.
Probab=99.11 E-value=8.4e-11 Score=96.60 Aligned_cols=123 Identities=25% Similarity=0.480 Sum_probs=93.2
Q ss_pred CCHHHHHHHHHHHHHCCHHHCCHHHHHH---------------HHHCCCHHHHHC---CCHHHHHHH------------H
Q ss_conf 8704676644673116120332658998---------------774899789872---998999999------------7
Q gi|254780479|r 37 PSPYKVWISEIMLQQTTVKTVEPYFKKF---------------MQKWPTIFCLSS---AKDEEILSA------------W 86 (356)
Q Consensus 37 ~~py~v~vseimlqqT~v~~v~~~~~~~---------------~~~~P~~~~la~---a~~~~vl~~------------w 86 (356)
T Consensus 146 kdP~EcliSfIcSsNnni~RiTrm~e~lc~~fG~~~~~~dgvtyH~FP~~~~LtgvaeGsledl~~~E~nlPsdfsfn~L 225 (379)
T TIGR00588 146 KDPFECLISFICSSNNNIARITRMVERLCQAFGPRLITLDGVTYHGFPSLHALTGVAEGSLEDLPEAEANLPSDFSFNHL 225 (379)
T ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 78715667788750465212543389999862203212246211479875665212100166799987515643462657
Q ss_pred --HCCCHHHHHHHHHHHHHHHHHCCCCC-C----------------CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE-C
Q ss_conf --40463458899987767543005786-8----------------73145688888777877667766434963131-2
Q gi|254780479|r 87 --AGLGYYTRARNLKKCADIIVKKYEGN-F----------------PHKVEILKKLPGIGDYTASAIVAIAFNHFAVV-V 146 (356)
Q Consensus 87 --~gLGyy~Rar~l~~~a~~i~~~~~g~-~----------------P~~~~~l~~LpGiG~yta~ai~s~a~~~~~~~-v 146 (356)
T Consensus 226 R~lG~GY--RA~Yi~~tar~l~ee~~~~nitsdta~LQ~ic~~~~Yedar~~L~~l~GVG~KVADCicLmgl~k~~avPV 303 (379)
T TIGR00588 226 RKLGLGY--RARYIRETARALLEEQGGRNITSDTAWLQQICKDADYEDAREALLELPGVGPKVADCICLMGLDKPQAVPV 303 (379)
T ss_pred HHCCCCC--CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf 5248875--40689999999884126642002357999860668867899997216999704888888652278971011
Q ss_pred CCCHHHHHHHHHCCC
Q ss_conf 431466657651975
Q gi|254780479|r 147 DTNIERIISRYFDII 161 (356)
Q Consensus 147 D~Nv~RVl~R~~~~~ 161 (356)
T Consensus 304 DVh~~~Ia~rdy~~s 318 (379)
T TIGR00588 304 DVHVRRIAKRDYQWS 318 (379)
T ss_pred HHHHHHHHHHCCCCC
T ss_conf 156888864403531