HHsearch alignment for GI: 254780479 and conserved domain: TIGR02705
>TIGR02705 nudix_YtkD nucleoside triphosphatase YtkD; InterPro: IPR014078 The proteins in this entry belong to the nudix family and share some sequence identity with Escherichia coli MutT but appear not to be functionally interchangeable with it. The functional assignment of the proteins in this family is contentious. Reference challenges the findings of reference , both in interpretation and in enzyme assay results..
Probab=90.94 E-value=0.36 Score=28.76 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=51.7
Q ss_pred EEEEEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEECCCE------EEEEEE-EEEEEEE
Q ss_conf 320003413760577645720132047442111134672158886301010000213735------899831-5999999
Q gi|254780479|r 240 GAVFIAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTHSAPFTANWILCNTI------THTFTH-FTLTLFV 312 (356)
Q Consensus 240 ~~~~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~~~~~~~~~~~l~~i------kH~fTH-~~L~i~v 312 (356)
T Consensus 26 ~HVlvip~~~~qWLlT~H~~RGl-----EFPGGKvE~GEt~~eAA~REv~EETGA~v~~l~Y~gQY~Ve~~~~~~f~K~v 100 (158)
T TIGR02705 26 NHVLVIPRYKDQWLLTEHKRRGL-----EFPGGKVEEGETSKEAAIREVYEETGAIVKELHYIGQYEVEGEDDTDFVKDV 100 (158)
T ss_pred CCEEEEEEECCEEEECCCCCCCC-----CCCCCEECCCCCHHHHHHEECCCCCCEEEEEEEEEEEEEEECCCCCEEEEEE
T ss_conf 95689755689334403587870-----4788800799884676510010035807546888876787589996657776
Q ss_pred EEEECCCCCC
Q ss_conf 9998077676
Q gi|254780479|r 313 WKTIVPQIVI 322 (356)
Q Consensus 313 ~~~~~~~~~~ 322 (356)
T Consensus 101 Yfa~V~~le~ 110 (158)
T TIGR02705 101 YFAEVSALES 110 (158)
T ss_pred EEEEEEEEEE
T ss_conf 6889987324