HHsearch alignment for GI: 254780479 and conserved domain: cd04674
>cd04674 Nudix_Hydrolase_16 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=94.74 E-value=0.11 Score=32.31 Aligned_cols=44 Identities=16% Similarity=0.086 Sum_probs=30.6
Q ss_pred EEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 034137605776457201320474421111346721588863010
Q gi|254780479|r 244 IAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTHSAP 288 (356)
Q Consensus 244 vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~~~~ 288 (356)
T Consensus 9 ~~~~~~d~vLl~rR~~~-P~~G~w~lPgGf~e~gEt~~~aa~RE~ 52 (118)
T cd04674 9 ALLPVDDGLLVIRRGIE-PGRGKLALPGGFIELGETWQDAVAREL 52 (118)
T ss_pred EEEEECCEEEEEEECCC-CCCCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf 99997999999985999-888858487537549999999999999