HHsearch alignment for GI: 254780479 and conserved domain: cd04684

>cd04684 Nudix_Hydrolase_25 Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability
Probab=97.94  E-value=0.00013  Score=52.99  Aligned_cols=104  Identities=14%  Similarity=0.169  Sum_probs=63.4

Q ss_pred             EEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCC------EECCCEEEEEE------EEEEEE
Q ss_conf             003413760577645720132047442111134672158886301010000------21373589983------159999
Q gi|254780479|r  243 FIAITNDNRILLRKRTNTRLLEGMDELPGSAWSSTKDGNIDTHSAPFTANW------ILCNTITHTFT------HFTLTL  310 (356)
Q Consensus       243 ~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~~~~~~~~~~~~~~------~~l~~ikH~fT------H~~L~i  310 (356)
T Consensus         4 ~avi~~~~~vLL~rr~~~-~~~g~W~lPGG~ve~gEt~~~aa~REv~EETGl~v~~~~~l~~~~~~~~~~~~~~~~~~v~   82 (128)
T cd04684           4 YAVIPRDGKLLLIQKNGG-PYEGRWDLPGGGIEPGESPEEALHREVLEETGLTVEIGRRLGSASRYFYSPDGDYDAHHLC   82 (128)
T ss_pred             EEEEEECCEEEEEEECCC-CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEEEECCCCCEEEEEEE
T ss_conf             999993999999997789-9898298985607799899999999999872937886338899999997899977679999


Q ss_pred             EEEEEECCCCC--------CCCCCEEECHHHHHHCCCCHHHHHHH
Q ss_conf             99999807767--------66781332278887479987899999
Q gi|254780479|r  311 FVWKTIVPQIV--------IIPDSTWHDAQNLANAALPTVMKKAL  347 (356)
Q Consensus       311 ~v~~~~~~~~~--------~~~~~~Wv~~~el~~~~LPs~~kKIL  347 (356)
T Consensus        83 ~~f~~~~~~g~~~~~~~~ee~~e~~W~~~del~e~~~~P~~~~~v  127 (128)
T cd04684          83 VFYDARVVGGALPVQEPGEDSHGAAWLPLDEAIERLLSPLVLWAV  127 (128)
T ss_pred             EEEEEEECCCCCCCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHH
T ss_conf             999999868940568999830599995889942312794787863