HHsearch alignment for GI: 254780479 and conserved domain: cd04692

>cd04692 Nudix_Hydrolase_33 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=96.12  E-value=0.063  Score=34.10  Aligned_cols=99  Identities=15%  Similarity=0.145  Sum_probs=54.0

Q ss_pred             EEEEEEEEEEC---CCEEEEEECCCCH-HHHCCCCCCC-CCCCCCCCHH------HHHHCCCCC--CCCEECCCEEEEEE
Q ss_conf             12320003413---7605776457201-3204744211-1134672158------886301010--00021373589983
Q gi|254780479|r  238 RTGAVFIAITN---DNRILLRKRTNTR-LLEGMDELPG-SAWSSTKDGN------IDTHSAPFT--ANWILCNTITHTFT  304 (356)
Q Consensus       238 r~~~~~vii~~---~~kiLL~KRp~~g-ll~GLwEFP~-~e~~~~~~~~------~~~~~~~~~--~~~~~l~~ikH~fT  304 (356)
T Consensus         3 ra~h~~v~-~~~~~~g~illqkRs~~K~~~Pg~wd~s~~Ghv~~gEt~~~aa~REl~EElGl~~~~~~l~~lg~~~~~~~   81 (144)
T cd04692           3 RTFHCWII-TKDEGKGYVLLQKRSANKKTYPGLWDISSAGHILAGETPLEDGIRELEEELGLDVSADDLIPLGTFKIEYD   81 (144)
T ss_pred             EEEEEEEE-ECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCEEEEEEEEEEE
T ss_conf             38999999-66799528999978899878998311665750457999899999899998688767688188218999974


Q ss_pred             EEE-----EEEEEEEEECC--------CCCCCCCCEEECHHHHHHC
Q ss_conf             159-----99999999807--------7676678133227888747
Q gi|254780479|r  305 HFT-----LTLFVWKTIVP--------QIVIIPDSTWHDAQNLANA  337 (356)
Q Consensus       305 H~~-----L~i~v~~~~~~--------~~~~~~~~~Wv~~~el~~~  337 (356)
T Consensus        82 ~~~~~~d~e~~~vy~~~~~~~~~~~~~~~~EV~~~~wv~~~el~~~  127 (144)
T cd04692          82 HIGKLIDREFHHVYLYELKVPLEEFTLQKEEVAGVVLIPLDEFAEL  127 (144)
T ss_pred             CCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHEEEEECHHHHHHH
T ss_conf             4998172089999999968984567899788105999879999999