HHsearch alignment for GI: 254780479 and conserved domain: pfam00633

>pfam00633 HHH Helix-hairpin-helix motif. The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.

Probab=97.50  E-value=2.9e-05  Score=57.54  Aligned_cols=30  Identities=43%  Similarity=0.605  Sum_probs=27.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             057868731456888887778776677664
Q gi|254780479|r  108 KYEGNFPHKVEILKKLPGIGDYTASAIVAI  137 (356)
Q Consensus       108 ~~~g~~P~~~~~l~~LpGiG~yta~ai~s~  137 (356)
T Consensus         1 ~~~~~~~as~eeL~~lpGVG~~tA~~I~~~   30 (30)
T pfam00633         1 SLEGLIPASREELLALPGVGPKTAEAILSY   30 (30)
T ss_pred             CCCCCCCCCHHHHHHCCCCCHHHHHHHHCC
T ss_conf             964435235999972889776889988539