HHsearch results for GI: 254780479 and protein with PDBid: 1kea_A

>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation, base twisting, hydrolase; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.96.1.2
Probab=100.00  E-value=0  Score=472.60  Aligned_cols=213  Identities=31%  Similarity=0.594  Sum_probs=203.5

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCHHHHHCCCHHH
Q ss_conf             67168999999999996289988754855444567870467664467311612033265899877489978987299899
Q gi|254780479|r    2 PQPEHIIQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFMQKWPTIFCLSSAKDEE   81 (356)
Q Consensus         2 ~~~~~~~~~~ll~w~~~~~R~lpwr~~~~~~~~~~~~py~v~vseimlqqT~v~~v~~~~~~~~~~~P~~~~la~a~~~~   81 (356)
                      .++.+.|++.||+||+.|+|+||||++        +|||.|||||||+|||++++|.++|.+|+++|||+++||+|+++|
T Consensus         6 ~~~~~~~~~~ll~wy~~~~r~lpWr~~--------~dp~~vlv~~iLsqqT~~~~v~~~~~~l~~~~pt~~~la~a~~~e   77 (221)
T 1kea_A            6 NKKRKVFVSTILTFWNTDRRDFPWRHT--------RDPYVILITEILLRRTTAGHVKKIYDKFFVKYKCFEDILKTPKSE   77 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCCGGGGC--------CCHHHHHHHHHHTTTSCHHHHHHHHHHHHHHCCSHHHHHHSCHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCC--------CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCHHH
T ss_conf             778999999999999966999999989--------987999999999821959999999999999788999998299999


Q ss_pred             HHHHHHCCCHH-HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCC
Q ss_conf             99997404634-58899987767543005786873145688888777877667766434963131243146665765197
Q gi|254780479|r   82 ILSAWAGLGYY-TRARNLKKCADIIVKKYEGNFPHKVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDI  160 (356)
Q Consensus        82 vl~~w~gLGyy-~Rar~l~~~a~~i~~~~~g~~P~~~~~l~~LpGiG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~~  160 (356)
                      |..+|.|+||| +||++|+++|++|+++|+|.+|.+.++|++|||||+|||++|++++||++.++||+||.||++|++++
T Consensus        78 l~~~i~~~G~~~~KA~~l~~~a~~i~~~~~g~vp~~~~eL~~LPGVG~ktA~~vl~~a~~~~~~~VD~~v~Rv~~R~~~~  157 (221)
T 1kea_A           78 IAKDIKEIGLSNQRAEQLKELARVVINDYGGRVPRNRKAILDLPGVGKYTCAAVMCLAFGKKAAMVDANFVRVINRYFGG  157 (221)
T ss_dssp             HHHHTGGGSCHHHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTCCHHHHHHHHHHTTCCCCCCCCHHHHHHHHHHHCG
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHCC
T ss_conf             99999987899999999999999998860587301288874489876567999999853887401044999999998067


Q ss_pred             CCC-CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf             545-73568999874102578522678999999998632041235643110000013431011
Q gi|254780479|r  161 IKP-APLYHKTIKNYARKITSTSRPGDFVQAMMDLGALICTSNKPLCPLCPIQKNCLTFSEGK  222 (356)
Q Consensus       161 ~~~-~~~~~k~l~~~~~~~~~~~~~~~~nQAlMdlGa~iC~p~~P~C~~Cpl~~~C~~~~~~~  222 (356)
                      ... .....+.++.+++.++|.+++++|||+|||||+.||+|++|+|+.|||++.|.+|+++.
T Consensus       158 ~~~~~~~~~~~l~~~~~~l~p~~~~~~~~~~l~~~G~~vC~~~~P~C~~Cpl~~~C~~y~k~~  220 (221)
T 1kea_A          158 SYENLNYNHKALWELAETLVPGGKCRDFNLGLMDFSAIICAPRKPKCEKCGMSKLCSYYEKCS  220 (221)
T ss_dssp             GGTTCCTTSHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHHTC-
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             889942679999999986288032999999999996887038899998898801084727779