HHsearch results for GI: 254780479 and protein with PDBid: 1kg2_A
>1kg2_A A/G-specific adenine glycosylase; DNA repair, hydrolase; 1.20A {Escherichia coli} SCOP: a.96.1.2 PDB: 1kg3_A 1muy_A 1kg6_A 1kg5_A 1mun_A 1mud_A 1kg4_A 1weg_A 1wei_A* 1wef_A* 1kg7_A 1kqj_A
Probab=100.00 E-value=0 Score=481.59 Aligned_cols=221 Identities=39% Similarity=0.753 Sum_probs=209.6
Q ss_pred CHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCHHHHHCCCHHHH
Q ss_conf 168999999999996289-9887548554445678704676644673116120332658998774899789872998999
Q gi|254780479|r 4 PEHIIQSKILDWYDTNHR-VLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFMQKWPTIFCLSSAKDEEI 82 (356)
Q Consensus 4 ~~~~~~~~ll~w~~~~~R-~lpwr~~~~~~~~~~~~py~v~vseimlqqT~v~~v~~~~~~~~~~~P~~~~la~a~~~~v 82 (356)
+++.|+++||+||+.++| +||||.+ +|||.|||||||+|||++++|.++|.+|+++|||+++||+|+++||
T Consensus 2 ~~~~~~~~ll~wy~~~~~~~lPWr~~--------~~p~~vlV~~iLsqqT~~~~v~~~~~~l~~~~~t~~~la~a~~~el 73 (225)
T 1kg2_A 2 QASQFSAQVLDWYDKYGRKTLPWQID--------KTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEV 73 (225)
T ss_dssp CHHHHHHHHHHHHHHHCCCCSGGGSS--------CCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCSSHHHHHHSCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCC--------CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHH
T ss_conf 86899999999999829987999999--------9869999999997328599999999999998789999972289999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC
Q ss_conf 99974046345889998776754300578687314568888877787766776643496313124314666576519754
Q gi|254780479|r 83 LSAWAGLGYYTRARNLKKCADIIVKKYEGNFPHKVEILKKLPGIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIK 162 (356)
Q Consensus 83 l~~w~gLGyy~Rar~l~~~a~~i~~~~~g~~P~~~~~l~~LpGiG~yta~ai~s~a~~~~~~~vD~Nv~RVl~R~~~~~~ 162 (356)
..+|.|+|||+||+||+++|++|+++|+|.+|.+.++|++|||||+|||++|+++|||+|.++||+||.||++|++++..
T Consensus 74 ~~~i~~~gy~~ka~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG~kTA~~il~~a~~~p~~~VDt~v~Rv~~Rl~~~~~ 153 (225)
T 1kg2_A 74 LHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSG 153 (225)
T ss_dssp HHHHTTSCCTHHHHHHHHHHHHHHHHSTTSCCCSHHHHHTSTTCCHHHHHHHHHHHHCCSCCCCCHHHHHHHHHHHTCCS
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHEEHHCCCCCC
T ss_conf 99986167327799999999999987079997429999758987478999999985298616328875540000215668
Q ss_pred C--CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 5--735689998741025785226789999999986320412356431100000134310110012344322
Q gi|254780479|r 163 P--APLYHKTIKNYARKITSTSRPGDFVQAMMDLGALICTSNKPLCPLCPIQKNCLTFSEGKSHLLGINTIK 232 (356)
Q Consensus 163 ~--~~~~~k~l~~~~~~~~~~~~~~~~nQAlMdlGa~iC~p~~P~C~~Cpl~~~C~~~~~~~~~~~P~kk~K 232 (356)
. ....++.++.+++.++|...+++||++|||||+.||+|++|+|+.|||++.|.+|++|.++.+|+|++|
T Consensus 154 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~lv~~G~~iC~~~~P~C~~Cpl~~~C~~~~~~~~~~~p~k~~k 225 (225)
T 1kg2_A 154 WPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPK 225 (225)
T ss_dssp CTTSHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTSCSSSCCGGGCTTTTTCHHHHHTCGGGSSCCCC-
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCCCC
T ss_conf 997268999999987513860000177799999978881599999998978222978765992017889999