HHsearch results for GI: 254780479 and protein with PDBid: 1m3q_A

>1m3q_A 8-oxoguanine DNA glycosylase; DNA repair, END product, HOGG, 8-aminoguanine, RE-ligation, hydrolase/DNA complex; HET: DRZ ANG; 1.90A {Homo sapiens} SCOP: a.96.1.3 d.129.1.2 PDB: 1m3h_A* 1n39_A* 1lwy_A* 1hu0_A* 1lwv_A* 1lww_A* 1fn7_A* 1n3a_A* 1n3c_A* 1ebm_A* 1ko9_A 2noe_A* 2noh_A* 2nol_A* 3ktu_A* 1yqk_A 2noz_A* 2nof_A* 1yqr_A* 1yql_A* ...
Probab=99.70  E-value=1.8e-17  Score=142.02  Aligned_cols=124  Identities=25%  Similarity=0.372  Sum_probs=106.1

Q ss_pred             CCHHHHHHHHHHHHHCCHHHCCHHHHHHHH---------------HCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             870467664467311612033265899877---------------48997898729989999997404634588999877
Q gi|254780479|r   37 PSPYKVWISEIMLQQTTVKTVEPYFKKFMQ---------------KWPTIFCLSSAKDEEILSAWAGLGYYTRARNLKKC  101 (356)
Q Consensus        37 ~~py~v~vseimlqqT~v~~v~~~~~~~~~---------------~~P~~~~la~a~~~~vl~~w~gLGyy~Rar~l~~~  101 (356)
                      +|||..+|+-|+-||+.+........++.+               .||+++.||+++.|+.++. -|+||  ||++++++
T Consensus       127 qdpfE~Lv~~I~sQq~si~~a~~~~~~L~~~~G~~~~~~~~~~~~~FPtp~~L~~~~~e~~lr~-~g~g~--Ra~~i~~~  203 (317)
T 1m3q_A          127 QDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRK-LGLGY--RARYVSAS  203 (317)
T ss_dssp             CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCEEEEETTEEEECCCCHHHHTSTTHHHHHHH-TTCTT--HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHH-CCCHH--HHHHHHHH
T ss_conf             9879999999999883399999999999998299877878642147899999973688999986-26368--99999999


Q ss_pred             HHHHHHCCCCCC----------CCHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEECCCCHHHHHHHHHCCCCC
Q ss_conf             675430057868----------73145688888777877667766434963-131243146665765197545
Q gi|254780479|r  102 ADIIVKKYEGNF----------PHKVEILKKLPGIGDYTASAIVAIAFNHF-AVVVDTNIERIISRYFDIIKP  163 (356)
Q Consensus       102 a~~i~~~~~g~~----------P~~~~~l~~LpGiG~yta~ai~s~a~~~~-~~~vD~Nv~RVl~R~~~~~~~  163 (356)
                      |+.+.+..+|..          ++-.++|++|||||++||..|+.++++.+ +.+||++|+|+++|+|+....
T Consensus       204 a~~~~~~~~g~~~l~~l~~~~~~e~~~~L~~l~GIG~wtAd~ilLf~lg~~dafPvD~~v~r~~~~~y~~~~~  276 (317)
T 1m3q_A          204 ARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVADCICLMALDKPQAVPVEVHMWHIAQRDYSWHPT  276 (317)
T ss_dssp             HHHHHHTSCSHHHHHHTTTSCHHHHHHHHTTSTTCCHHHHHHHHHHHSCCTTCCCCSHHHHHHHHHHHCCCCS
T ss_pred             HHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCC
T ss_conf             9999853444046998853557999999985489488999999998579998677529999999997133555