HHsearch results for GI: 254780479 and protein with PDBid: 2jhn_A
>2jhn_A ALKA, 3-methyladenine DNA-glycosylase; DNA repair, N1-methyladenine, N3-methylcytosine, hyperthermophiles, hydrolase; HET: MBO MES; 1.8A {Archaeoglobus fulgidus} PDB: 2jhj_A
Probab=99.60 E-value=6.1e-15 Score=124.20 Aligned_cols=160 Identities=18% Similarity=0.216 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHCCHHHCCHHHHHHHHH--------------CCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 8704676644673116120332658998774--------------89978987299899999974046345889998776
Q gi|254780479|r 37 PSPYKVWISEIMLQQTTVKTVEPYFKKFMQK--------------WPTIFCLSSAKDEEILSAWAGLGYYTRARNLKKCA 102 (356)
Q Consensus 37 ~~py~v~vseimlqqT~v~~v~~~~~~~~~~--------------~P~~~~la~a~~~~vl~~w~gLGyy~Rar~l~~~a 102 (356)
.|||..+|.-|+-||..|+.....+.++.++ |||++.||+++++++..+ |++ ++||+.|+..|
T Consensus 116 ~d~fE~lv~aIl~Qqis~~aA~~i~~rl~~~~G~~~~~~~~~~~~fPtp~~la~~~~~~L~~~--Gl~-~~Ka~~i~~lA 192 (295)
T 2jhn_A 116 MSVFEGIAKAIIQQQISFVVAEKLAAKIVGRFGDEVEWNGLKFYGFPTQEAILKAGVEGLREC--GLS-RRKAELIVEIA 192 (295)
T ss_dssp SSHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHT--TCC-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHCCCHHHHHHC--CCC-HHHHHHHHHCC
T ss_conf 899999999998515219999999999999958866776301037999999984999999778--973-88999998501
Q ss_pred HHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC-CCCHHHHHHHHHCCCCCCCHHHHHHHHHH-HCC
Q ss_conf 7543005786873--1456888887778776677664349631312-43146665765197545735689998741-025
Q gi|254780479|r 103 DIIVKKYEGNFPH--KVEILKKLPGIGDYTASAIVAIAFNHFAVVV-DTNIERIISRYFDIIKPAPLYHKTIKNYA-RKI 178 (356)
Q Consensus 103 ~~i~~~~~g~~P~--~~~~l~~LpGiG~yta~ai~s~a~~~~~~~v-D~Nv~RVl~R~~~~~~~~~~~~k~l~~~~-~~~ 178 (356)
+.+..+.-...|. -.+.|++|||||+.||..|+.++++..+.++ |..|+|.+.|+|+.....+ .+.+..++ +.+
T Consensus 193 ~~~~~~~l~~~~~~e~~~~L~~i~GIGpWTA~~ill~~lg~d~fP~~D~~l~ral~~ly~~~~~~~--~~~~~~~a~e~w 270 (295)
T 2jhn_A 193 KEENLEELKEWGEEEAYEYLTSFKGIGRWTAELVLSIALGKNVFPADDLGVRRAVSRLYFNGEIQS--AEKVREIARERF 270 (295)
T ss_dssp TCSSGGGGGGSCHHHHHHHHHTSTTCCHHHHHHHHHHTTCCCCCCTTCHHHHHHHHHHHSTTCCCC--HHHHHHHHHHHT
T ss_pred CCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC--HHHHHHHHHHHC
T ss_conf 135556541288588888998459948899999999816989522745999999999707888999--999999998757
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7852267899999999863204123
Q gi|254780479|r 179 TSTSRPGDFVQAMMDLGALICTSNK 203 (356)
Q Consensus 179 ~~~~~~~~~nQAlMdlGa~iC~p~~ 203 (356)
-| ..+-..+-|-.+++..|++++
T Consensus 271 ~P--yrsya~~~Lw~~~R~~~~k~~ 293 (295)
T 2jhn_A 271 GR--FARDILFYLFLYDRFFSKKTE 293 (295)
T ss_dssp GG--GHHHHHHHHHHHHHHTTC--C
T ss_pred CC--HHHHHHHHHHHHCHHHCCCCC
T ss_conf 65--999999999984631155335