HHsearch results for GI: 254780479 and protein with PDBid: 2xsq_A
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A
Probab=94.67 E-value=0.035 Score=34.35 Aligned_cols=88 Identities=14% Similarity=0.132 Sum_probs=52.2
Q ss_pred CCEEEEEECCCCHHHHCCCCCCCCCCCCCCCH-HH------HHHCCCCCCCCEECC---CEEEEEEEEEEEEEEEEEECC
Q ss_conf 76057764572013204744211113467215-88------863010100002137---358998315999999999807
Q gi|254780479|r 249 DNRILLRKRTNTRLLEGMDELPGSAWSSTKDG-NI------DTHSAPFTANWILCN---TITHTFTHFTLTLFVWKTIVP 318 (356)
Q Consensus 249 ~~kiLL~KRp~~gll~GLwEFP~~e~~~~~~~-~~------~~~~~~~~~~~~~l~---~ikH~fTH~~L~i~v~~~~~~ 318 (356)
++.+|+.+| +.|.|.||++..+..+.. .. .++..........+. ...|..++.++..++|.+.+.
T Consensus 64 ~~~vl~~~r-----~~g~~~~PgG~~~~~e~~~~~~~~Re~~Ee~Gl~~~~~~~l~~~y~~~h~~~~~~vv~h~Y~~~vt 138 (217)
T 2xsq_A 64 RYAILMQMR-----FDGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLT 138 (217)
T ss_dssp EEEEEEEEE-----TTSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECC
T ss_pred CCEEEEEEE-----CCCEEECCCEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECC
T ss_conf 216899995-----699696897402799987999999999998587643137875357524548997299999999833
Q ss_pred C----------------CCCCCCCEEECHHHHHH--CCCCH
Q ss_conf 7----------------67667813322788874--79987
Q gi|254780479|r 319 Q----------------IVIIPDSTWHDAQNLAN--AALPT 341 (356)
Q Consensus 319 ~----------------~~~~~~~~Wv~~~el~~--~~LPs 341 (356)
. .....+..|+++..+.+ +++|.
T Consensus 139 ~~~l~~iE~~~~~a~d~~~E~l~l~~VPl~~L~d~~~~LPa 179 (217)
T 2xsq_A 139 LEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPT 179 (217)
T ss_dssp HHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCH
T ss_conf 65654644035444668723103499864773005578727