HHsearch results for GI: 254780479 and protein with PDBid: 3gz5_A
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=96.59 E-value=0.012 Score=37.53 Aligned_cols=106 Identities=14% Similarity=0.182 Sum_probs=58.3
Q ss_pred EEEEECCCEEEEEECCCCHHHHCCCCCCCCCCCC--CCCHHHHHHCCCCCCCCEECC--CEEEEEEE-----EEEEE-EE
Q ss_conf 0034137605776457201320474421111346--721588863010100002137--35899831-----59999-99
Q gi|254780479|r 243 FIAITNDNRILLRKRTNTRLLEGMDELPGSAWSS--TKDGNIDTHSAPFTANWILCN--TITHTFTH-----FTLTL-FV 312 (356)
Q Consensus 243 ~vii~~~~kiLL~KRp~~gll~GLwEFP~~e~~~--~~~~~~~~~~~~~~~~~~~l~--~ikH~fTH-----~~L~i-~v 312 (356)
+-+.+.+.+|||.||... -..|.|.||++..+. +++...........+...... ..-++|++ ....+ .+
T Consensus 30 f~~~~~~lkVLLvkR~~~-P~~G~WaLPGG~ve~~~gEsl~eAA~Rel~EETGl~~~~leql~~f~~~~Rdp~~~~isv~ 108 (240)
T 3gz5_A 30 FTYHDQQLKVLLVQRSNH-PFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGNNSRDARGWSVTVC 108 (240)
T ss_dssp EEEETTEEEEEEEECCSS-SSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEESSSSTTSCEEEEE
T ss_pred EEEECCCCEEEEEECCCC-CCCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEE
T ss_conf 998789868999974689-9999788994577788897999999999987507876402588897654358998305899
Q ss_pred EEEECC------CCCCCCCCEEECHHHHHHCCCCHHHHHHHHH
Q ss_conf 999807------7676678133227888747998789999984
Q gi|254780479|r 313 WKTIVP------QIVIIPDSTWHDAQNLANAALPTVMKKALSA 349 (356)
Q Consensus 313 ~~~~~~------~~~~~~~~~Wv~~~el~~~~LPs~~kKIL~a 349 (356)
|.+.++ ......+..|+..+++....+.--++.||+.
T Consensus 109 y~~l~~~~~~~~~~~e~~~~~w~~~~d~~~~~lafdh~~II~~ 151 (240)
T 3gz5_A 109 YTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQ 151 (240)
T ss_dssp EEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHH
T ss_conf 9998457765667654353399848877678776369999999