RPSBLAST alignment of GI: 254780479 and protein with PDBid: 1orn
>1orn_A Endonuclease III; DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, hydrolase/DNA complex; HET: PED; 1.70A {Geobacillus stearothermophilus} SCOP: a.96.1.1 PDB: 1orp_A* 1p59_A* Length = 226
Score = 172 bits (437), Expect = 9e-44
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 14/214 (6%)
Query: 6 HIIQSKILDWYDTNHRVLPWRTSPKTEKSSLPSPYKVWISEIMLQQTTVKTVEPYFKKFM 65
++ + H L R P+++ I+ ++ Q T V K+
Sbjct: 11 RYCLDEMAKMFPDAHCELVHRN-----------PFELLIAVVLSAQCTDALVNKVTKRLF 59
Query: 66 QKWPTIFCLSSAKDEEILSAWAGLGY-YTRARNLKKCADIIVKKYEGNFPHKVEILKKLP 124
+K+ T + EE+ +G +ARN++K +++ KY G P + L KLP
Sbjct: 60 EKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLP 119
Query: 125 GIGDYTASAIVAIAFNHFAVVVDTNIERIISRYFDIIKPAPLYHKTIKNYARKITSTSRP 184
G+G TA+ +V++AF A+ VDT++ER+ R ++ KI
Sbjct: 120 GVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFC--RWDDSVLEVEKTLMKIIPKEEW 177
Query: 185 GDFVQAMMDLGALICTSNKPLCPLCPIQKNCLTF 218
M+ G C + P CP CP+ C
Sbjct: 178 SITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREG 211