HHsearch results for GI: 254780480 and protein with PDBid: 1dun_A
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A
Probab=99.15 E-value=2.3e-10 Score=86.10 Aligned_cols=96 Identities=17% Similarity=0.242 Sum_probs=74.4
Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEE--EECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEEC--CCCCEEEEC
Q ss_conf 39988997899986334442834016445--30433342134216045688665434566750478861--788889947
Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMI--PYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVR--SSVPFVLEH 324 (367)
Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~--~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr--~~~p~~l~~ 324 (367)
.++|+|+++++..|.+++.+|+++++... ++.++-|. .+| +|.+||||.|.+. +++. ++.|+.++.
T Consensus 26 d~~i~pg~~~~i~tg~~i~iP~~~~~~i~~RSsl~k~gl-~v~-~gvID~gy~G~l~--------v~l~N~~~~~~~i~~ 95 (134)
T 1dun_A 26 DIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGL-LIN-GGIIDEGYTGEIQ--------VICTNIGKSNIKLIE 95 (134)
T ss_dssp CEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTE-EEE-CCEEETTCCSCCE--------EEEEECSSSCEEECT
T ss_pred CEEECCCCEEEEECCCEEECCCCEEEEEECCCHHCCCCC-CCC-CEEECCCCCCEEE--------EEEEECCCCCEEECC
T ss_conf 989999998999887399768627999986663202783-124-3387688864699--------999989998779848
Q ss_pred CCEEEEEEEEECCCCCCCCCCC----CCCCCCCC
Q ss_conf 9888999997637664222375----43472326
Q gi|254780480|r 325 GQIIGRLKYESMDGEPERLYGE----ARGSHYQS 354 (367)
Q Consensus 325 g~~i~~l~~~~~~~~p~~~Yg~----~~~s~Yq~ 354 (367)
|++||||+|+++..+....|.+ .+|+++.|
T Consensus 96 G~rIaQlv~~~~~~~~~~~~~~~~~t~RG~~gFG 129 (134)
T 1dun_A 96 GQKFAQLIILQHHSNSRQPWDENKISQRGDKGFG 129 (134)
T ss_dssp TCEEEEEEEEECCCCCCCCCCTTCC---------
T ss_pred CCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCC
T ss_conf 9969999997868666999155881616799797