Query         gi|254780480|ref|YP_003064893.1| 2'-deoxycytidine 5'-triphosphate deaminase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 367
No_of_seqs    242 out of 475
Neff          5.3 
Searched_HMMs 23785
Date          Mon May 30 11:56:03 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780480.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2r9q_A AGR_C_764P, 2'-deoxycyt 100.0       0       0  911.7  37.0  360    2-365     9-369 (370)
  2 1pkh_A Bifunctional deaminase/ 100.0   2E-38 8.4E-43  269.3  17.9  154    4-166     1-171 (204)
  3 2qxx_A DCTP deaminase, deoxycy 100.0   3E-38 1.3E-42  268.1  13.9  154    4-165     1-155 (190)
  4 1xs1_A DCTP deaminase, deoxycy 100.0 1.2E-37 5.2E-42  264.1  13.0  155    4-165     1-164 (193)
  5 3km3_A DCTP deaminase, deoxycy 100.0 2.6E-35 1.1E-39  248.9  14.7  148    4-165    23-180 (206)
  6 2yzj_A 167AA long hypothetical 100.0 3.4E-34 1.4E-38  241.6  14.0  143    3-165    10-152 (169)
  7 1xs1_A DCTP deaminase, deoxycy 100.0 1.4E-33 5.9E-38  237.6  15.1  184  166-365     1-193 (193)
  8 2qxx_A DCTP deaminase, deoxycy 100.0 1.3E-31 5.6E-36  224.7  14.3  180  166-366     1-186 (190)
  9 3km3_A DCTP deaminase, deoxycy 100.0 3.5E-31 1.5E-35  222.0  12.0  175  164-362    21-205 (206)
 10 1pkh_A Bifunctional deaminase/ 100.0 2.5E-29 1.1E-33  209.9  12.5  183  166-366     1-200 (204)
 11 2yzj_A 167AA long hypothetical  99.9 9.1E-24 3.8E-28  173.6  12.0  161  163-357     8-168 (169)
 12 2r9q_A AGR_C_764P, 2'-deoxycyt  99.8 2.1E-20 8.8E-25  151.6  13.2  151    3-164   172-340 (370)
 13 1dun_A Deoxyuridine 5'-triphos  99.6 1.5E-15 6.3E-20  119.9   8.1   84   74-165    24-108 (134)
 14 2bsy_A Deoxyuridine 5'-triphos  99.6 9.5E-13   4E-17  101.6  19.7  188   74-339    31-222 (278)
 15 1f7d_A POL polyprotein; eight   99.5 9.4E-14 3.9E-18  108.2   8.7   85   73-165    22-107 (136)
 16 2ol1_A Deoxyuridine 5'-triphos  99.4 3.6E-13 1.5E-17  104.4   9.0   84   74-165    37-121 (147)
 17 3lqw_A Deoxyuridine 5'-triphos  99.4 2.4E-12   1E-16   99.0  10.9   87   71-165    50-138 (163)
 18 3c2t_A Deoxyuridine triphospha  99.4 3.4E-12 1.4E-16   98.0   9.1   84   74-165    31-116 (141)
 19 3ecy_A CG4584-PA, isoform A (b  99.3 1.7E-11 6.9E-16   93.5  10.3   84   74-164    49-133 (160)
 20 3ca9_A Deoxyuridine triphospha  99.3 1.2E-11 5.2E-16   94.4   8.9   84   74-165    47-132 (165)
 21 3p48_A Deoxyuridine 5'-triphos  99.3 1.3E-11 5.4E-16   94.3   9.0   82   74-163    36-119 (147)
 22 3f4f_A Deoxyuridine 5'-triphos  99.3 1.4E-11 5.8E-16   94.0   9.0   83   73-163    55-139 (167)
 23 3hza_A Deoxyuridine 5'-triphos  99.3 1.5E-11 6.3E-16   93.8   8.2   87   73-165    51-140 (174)
 24 2d4n_A DU; jelly roll, hydrola  99.3 3.3E-11 1.4E-15   91.6   9.8   82   74-163    46-128 (152)
 25 3mdx_A Deoxyuridine 5'-triphos  99.3 2.7E-11 1.1E-15   92.1   9.2   86   73-164    64-151 (178)
 26 3ehw_A DUTP pyrophosphatase; j  99.2 4.8E-11   2E-15   90.5   9.2   86   71-164    50-137 (164)
 27 2p9o_A DUTP pyrophosphatase-li  99.2 1.3E-10 5.6E-15   87.6  10.4   84   73-164    58-143 (169)
 28 2xcd_A Probable deoxyuridine 5  99.2 2.5E-11 1.1E-15   92.3   6.5   85   74-164    31-118 (144)
 29 3h6x_A Dutpase; jelly-roll bet  99.2 6.8E-11 2.9E-15   89.5   8.2   84   74-163    35-126 (148)
 30 1vyq_A Deoxyuridine 5'-triphos  99.2 3.7E-11 1.5E-15   91.3   5.8  119   32-164    25-144 (173)
 31 1dun_A Deoxyuridine 5'-triphos  99.1 2.3E-10 9.6E-15   86.1   9.6   96  249-354    26-129 (134)
 32 1f7d_A POL polyprotein; eight   98.9 5.3E-09 2.2E-13   77.2   9.6   84  249-340    25-110 (136)
 33 2bsy_A Deoxyuridine 5'-triphos  98.9 7.5E-09 3.1E-13   76.2  10.2  123   26-164    92-219 (278)
 34 3f4f_A Deoxyuridine 5'-triphos  98.9   7E-08 2.9E-12   69.9  13.7  116  196-340    28-144 (167)
 35 3p48_A Deoxyuridine 5'-triphos  98.9 1.8E-08 7.6E-13   73.7  10.3   87  249-341    38-125 (147)
 36 1euw_A Dutpase, deoxyuridine 5  98.9 1.4E-08 5.7E-13   74.5   9.3   85   75-165    39-126 (152)
 37 3lqw_A Deoxyuridine 5'-triphos  98.8 3.3E-08 1.4E-12   72.0  10.8   84  249-338    55-139 (163)
 38 2ol1_A Deoxyuridine 5'-triphos  98.8   3E-08 1.2E-12   72.3   9.9   86  249-340    39-124 (147)
 39 3ecy_A CG4584-PA, isoform A (b  98.8 6.4E-08 2.7E-12   70.1  11.2   84  249-338    51-135 (160)
 40 3c2t_A Deoxyuridine triphospha  98.8 8.4E-08 3.5E-12   69.3  10.5   86  249-340    33-119 (141)
 41 2xcd_A Probable deoxyuridine 5  98.7 7.8E-08 3.3E-12   69.6  10.2   91  237-338    25-120 (144)
 42 3ca9_A Deoxyuridine triphospha  98.7   1E-07 4.3E-12   68.8  10.4   85  249-339    49-134 (165)
 43 3h6x_A Dutpase; jelly-roll bet  98.7 1.7E-07   7E-12   67.4  11.2   90  249-338    37-129 (148)
 44 3hza_A Deoxyuridine 5'-triphos  98.7 1.2E-07 4.9E-12   68.4  10.2   86  249-340    54-143 (174)
 45 3mdx_A Deoxyuridine 5'-triphos  98.7 2.7E-07 1.1E-11   66.1  11.1   86  247-338    65-153 (178)
 46 3ehw_A DUTP pyrophosphatase; j  98.7 2.1E-07 8.7E-12   66.8  10.2   85  249-339    55-140 (164)
 47 2d4n_A DU; jelly roll, hydrola  98.5   1E-06 4.2E-11   62.3   9.2   85  249-342    48-135 (152)
 48 2p9o_A DUTP pyrophosphatase-li  98.5 1.7E-06   7E-11   60.9  10.2   86  249-340    61-147 (169)
 49 1euw_A Dutpase, deoxyuridine 5  98.2 1.3E-05 5.5E-10   55.0  10.7   88  247-340    38-129 (152)
 50 1vyq_A Deoxyuridine 5'-triphos  97.9 5.9E-05 2.5E-09   50.8   8.2   79  252-337    64-145 (173)
 51 1r57_A Conserved hypothetical   52.2     9.4  0.0004   16.8   3.0   36  322-357    17-52  (102)
 52 2cay_A VPS36 PH domain, vacuol  39.8     9.1 0.00038   16.9   1.3   35  231-268     6-40  (145)
 53 3mml_B Allophanate hydrolase s  32.7     7.6 0.00032   17.4   0.0  100  224-335   118-226 (228)
 54 2a1x_A Phytanoyl-COA dioxygena  32.6      17 0.00072   15.1   1.8   32    1-32     18-49  (308)
 55 2pcn_A S-adenosylmethionine:2-  24.3      29  0.0012   13.6   2.4   28  248-275   132-159 (161)
 56 1uwf_A FIMH protein, FIMH; bac  20.9      34  0.0014   13.1   4.6   36  129-164    99-134 (158)

No 1  
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str}
Probab=100.00  E-value=0  Score=911.75  Aligned_cols=360  Identities=58%  Similarity=0.953  Sum_probs=351.8

Q ss_pred             CCCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECC
Q ss_conf             87615868999999879849817898656571225887589899981231578886211000240478873688648668
Q gi|254780480|r    2 NKGVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDA   81 (367)
Q Consensus         2 ~~GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLep   81 (367)
                      ++|||||++|++++++|.|.+++|++++||||||+|||||++|||+++||+|+.+.+|.++++++.+++++++++|+|+|
T Consensus         9 ~~GILsd~~I~~li~~g~I~i~p~~~~~QIqPaSvDLrLG~~~~~~~~s~lp~~~~~v~d~~~~~~~~~i~~~~~~vL~P   88 (370)
T 2r9q_A            9 TTGILADGAIRALFAGDKLKSEADLDVDQVQPASLDLRLGSKAYRVRASFMPGPGTRVIDKLNRFSLHEVDLSQGAVLET   88 (370)
T ss_dssp             CSEECCHHHHHHHHHHTSEEESSCCCTTCBCSSCEEEEBCSEEEEESSBCCCCTTCCHHHHHHHC-CEEEECSSCEEECT
T ss_pred             CCEECCHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEECC
T ss_conf             68878699999998779917079999777788569832387899996544778997401112254159995799809758


Q ss_pred             CCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEE
Q ss_conf             73299998889984998279986013431125034232078775542366744389999516865279833980356898
Q gi|254780480|r   82 NCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRF  161 (367)
Q Consensus        82 g~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI~v~~G~rl~Qi~f  161 (367)
                      ||+||++|+|+|+||+|++|+++||||+||||||||+++|++.+|++|||||+|+|||||+|+||||+||||||||||||
T Consensus        89 g~~yL~~t~E~i~LP~di~a~~~~KSS~gRlgl~~~~~~~~~~~~~~i~~Gy~G~ltLEI~n~s~pI~l~~G~ri~Ql~F  168 (370)
T 2r9q_A           89 GCVYIVPLMESLALPADMSASANPKSSTGRLDIFTRVMTDNAQEFDKIPAGYTGPLYLEISPRTFPIVVRRGSRLSQIRF  168 (370)
T ss_dssp             TCEEEEEEEEEEECCTTEEEEEEECHHHHTTTEEEEEEETTCSSTTEECTTCEEEEEEEEEESSSCEEECTTCEEEEEEE
T ss_pred             CCEEEEEEEEEEECCCCCEEEEECCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEE
T ss_conf             97899998779966998589998213132153787430357755664576421149999945875779968975788997


Q ss_pred             EECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHC
Q ss_conf             50887689999999875278603665544337316788814554566663045512677513015655558778664311
Q gi|254780480|r  162 VKERKFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLF  241 (367)
Q Consensus       162 ~~g~~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~  241 (367)
                      ++|++++||++|+++|++++||+++.+..+++|+++||||+++  ..+++|||||||||++||++|+++|++++|||||+
T Consensus       169 ~~g~~~lsd~~l~~lh~~~~lv~~~~~~~~~~gl~lsVdL~~~--~~~~iigyrAk~h~~~Id~~k~~~y~~~~fwe~i~  246 (370)
T 2r9q_A          169 RIGHALLNESEVLKLHETETLVASENPNVTGGGIALSIDLKGF--GENGLIGYRGKHHTAVVDVDKKAQHDVLDFWEPLF  246 (370)
T ss_dssp             EESCCBCCHHHHHHHHHHSCSBC---CCCCC--EEEEBCCSCC--TTTTEEEEEECSSCCCEETTCGGGSCGGGTEEEEE
T ss_pred             ECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC--CCCCCEEEECCCCCCCEEECCCCCCCHHHHHHEEE
T ss_conf             3377666889999877408732477544147882589983356--77871799614678836605655246878431021


Q ss_pred             CCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC-CCCE
Q ss_conf             355777539988997899986334442834016445304333421342160456886654345667504788617-8888
Q gi|254780480|r  242 SWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS-SVPF  320 (367)
Q Consensus       242 ~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~-~~p~  320 (367)
                      ..  +++.|+|+||||||++|+|+|+||+|+||||+++++.+|+||+||||||||||+|+.+++.|+++|||||+ ++||
T Consensus       247 ~~--~~~~~iL~P~ef~l~~T~E~v~iP~~~aa~~~~rs~~~r~g~~~~agf~DpGf~g~~~~~~g~~~vLev~~~~~p~  324 (370)
T 2r9q_A          247 AR--GRAELILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHAQAGGTGSRAVLEVRSHEVPF  324 (370)
T ss_dssp             CC--SSSEEEECTTCCEEEEEEEEECCCTTEEEEEEECGGGTTTEEEESCCEECTTTTC-----CCEEEEEEEEECSSCE
T ss_pred             CC--CCCEEEEECCCEEEEEEEEEEEECCCEEEEEEEECHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE
T ss_conf             27--8977999679799999999999789739999704343258267647517699876445566855999992698886


Q ss_pred             EEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             994798889999976376642223754347232666773443430
Q gi|254780480|r  321 VLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQALKLSKHFHQ  365 (367)
Q Consensus       321 ~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl~lsk~f~~  365 (367)
                      +|++||+||||+||+|+++|+++||++++||||+||||||||||+
T Consensus       325 ~l~~G~~I~qlvfe~l~~~p~~~Yg~~~~s~Yq~Qg~~lsK~fk~  369 (370)
T 2r9q_A          325 ILEHGQIVGRLVYEHMLEKPEGLYGTGLGSNYQAQGLKLSKHFRA  369 (370)
T ss_dssp             EEETTCEEEEEEEEEBSSCCC------------------------
T ss_pred             EEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
T ss_conf             983899999999999878765556887787144888881220357


No 2  
>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A*
Probab=100.00  E-value=2e-38  Score=269.27  Aligned_cols=154  Identities=23%  Similarity=0.286  Sum_probs=127.3

Q ss_pred             CCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEE------------
Q ss_conf             61586899999987984981789865657122588758989998123157888621100024047887------------
Q gi|254780480|r    4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREI------------   71 (367)
Q Consensus         4 GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~ei------------   71 (367)
                      |||||++|++++++|.|.++ ||+++||||||+|||||+++++++.+.++.......+++.......+            
T Consensus         1 MILsd~~I~~~i~~g~i~I~-Pf~~~~i~p~s~DlrLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (204)
T 1pkh_A            1 MILSDKDIIDYVTSKRIIIK-PFNKDFVGPCSYDVTLGDEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNLTEEKI   79 (204)
T ss_dssp             CBCCHHHHHHHHHTTSSEEE-SCCGGGBCSSCEEEEBCSEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCCCHHHH
T ss_pred             CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             92788999999876986784-78967648744888726879996051136544565210135642101555433343220


Q ss_pred             -----ECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             -----368864866873299998889984998279986013431125034232078775542366744389999516865
Q gi|254780480|r   72 -----DLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTF  146 (367)
Q Consensus        72 -----dl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sf  146 (367)
                           +.+..|+++|+  ||++|+|+|+||+|++|+++||||+||+|+++|.+++      +|||||+|++||||+|.++
T Consensus        80 ~~~~~~~~~~~~~~~~--~L~~t~E~v~lP~~i~~~~~~rSS~aR~Gl~v~~tag------~iDpGy~G~ltLei~n~~~  151 (204)
T 1pkh_A           80 NYFKEKYNVDYVVEGG--VLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAG------WIDAGFKGKITLEIVAFDK  151 (204)
T ss_dssp             HHHHHHHCCSEEEESC--EEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCC------EECTTCEEEEEEEEEESSS
T ss_pred             EEECCCCCCEECCCCC--EEEEEEEEEECCCCEEEEEEECCHHHHCCCCCCCCCC------CCCCCCCCEEEEEEEECCC
T ss_conf             2200366731405871--8999888996289818999814627647721234465------4888977669999997898


Q ss_pred             CEEEECCCEEEEEEEEECCC
Q ss_conf             27983398035689850887
Q gi|254780480|r  147 PIVVRVGSRLSQIRFVKERK  166 (367)
Q Consensus       147 pI~v~~G~rl~Qi~f~~g~~  166 (367)
                      ||+||+|||||||+|++...
T Consensus       152 pi~i~~G~~I~QlvF~~~~~  171 (204)
T 1pkh_A          152 PVILYKNQRIGQLIFSKLLS  171 (204)
T ss_dssp             CEEEETTCEEEEEEEEECSS
T ss_pred             CEEEECCCEEEEEEEEECCC
T ss_conf             98983899999999997777


No 3  
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis H37RV} PDB: 2qlp_A*
Probab=100.00  E-value=3e-38  Score=268.08  Aligned_cols=154  Identities=21%  Similarity=0.329  Sum_probs=129.3

Q ss_pred             CCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCCC
Q ss_conf             61586899999987984981789865657122588758989998123157888621100024047887368864866873
Q gi|254780480|r    4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDANC   83 (367)
Q Consensus         4 GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg~   83 (367)
                      |||||++|++++++|.|.++ ||+++||||||+|||||++++++.....+..+.. .+..+.........+++++|+||+
T Consensus         1 MILsd~~I~~~i~~g~i~I~-Pf~~~~iqpas~DLrLg~~~~v~~~~~~~~id~~-~~~~~~~~~~~~~~~~~~~l~Pg~   78 (190)
T 2qxx_A            1 MLLSDRDLRAEISSGRLGID-PFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPA-KQQDELTSLVQPVDGEPFVLHPGE   78 (190)
T ss_dssp             CBCCHHHHHHHHHTTSSEEE-SCCGGGEETTEEEEEBCSCEEECCCSSCSCCCTT-SCCGGGSEEECCCTTCCEEECTTC
T ss_pred             CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCCEEEEECCEEEEEECCCCCCCCCC-CCCCCCCEEEECCCCCEEEECCCE
T ss_conf             91688999999985992685-8997883876173782463899504467644531-034432002450689869975991


Q ss_pred             EEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEE
Q ss_conf             29999888998499827998601343112503423207877554236674438999951686-52798339803568985
Q gi|254780480|r   84 VYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFV  162 (367)
Q Consensus        84 ~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~  162 (367)
                      +||++|.|+|++|+|++|+++||||++|+|+++|.+++      +|||||+|+||||+.|.+ .||.+++|||||||+|+
T Consensus        79 ~~L~~T~E~i~lp~~~~~~~~~rSs~~R~Gl~~~~~ag------~iDpGy~G~l~lel~n~~~~~i~i~~G~riaQlvf~  152 (190)
T 2qxx_A           79 FVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAG------FIDPGFSGHITLELSNVANLPITLWPGMKIGQLCML  152 (190)
T ss_dssp             EEEEEBSSEEECCTTEEEEEECCHHHHTTTEEECCTTC------EECTTCEECCEEEEEECSSSCEEECTTSEEEEEEEE
T ss_pred             EEEEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCC------CCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEE
T ss_conf             99999667886599989999705728756710233466------527997664899999378857798389999999999


Q ss_pred             ECC
Q ss_conf             088
Q gi|254780480|r  163 KER  165 (367)
Q Consensus       163 ~g~  165 (367)
                      +-.
T Consensus       153 ~~~  155 (190)
T 2qxx_A          153 RLT  155 (190)
T ss_dssp             ECS
T ss_pred             ECC
T ss_conf             865


No 4  
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A*
Probab=100.00  E-value=1.2e-37  Score=264.08  Aligned_cols=155  Identities=23%  Similarity=0.333  Sum_probs=129.4

Q ss_pred             CCCCHHHHHHHHHCCCEEECCCCCH-HHCCCCEEEEEECCEEEEEECCCCCCCCCC-----HHHHCCC--CEEEEEECCC
Q ss_conf             6158689999998798498178986-565712258875898999812315788862-----1100024--0478873688
Q gi|254780480|r    4 GVLPDKAIATLAERGDIVSEHPLEK-NQIQPASIDLRLSSKAYRVRASFLPNIDGL-----VSDKIKH--FKLREIDLSG   75 (367)
Q Consensus         4 GILsd~~I~~li~~g~I~i~~p~~~-~QIQPaSiDLRLG~~~~rv~asflp~~~~~-----v~~~l~~--~~~~eidl~~   75 (367)
                      |||||++|++++++|.|.++ |+++ +||||||+|||||+++++++.+..+..+..     .......  ......+.++
T Consensus         1 MiLSd~~I~~~i~~g~i~i~-P~~~~~~iqp~s~DLrLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (193)
T 1xs1_A            1 MRLCDRDIEAWLDEGRLSIN-PRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGE   79 (193)
T ss_dssp             CBCCHHHHHHHHHHTSSEEE-SCCCGGGEETTEEEEEBCSEEBCBCGGGCSCEETTSCHHHHHHHHHHHBCCCEECCTTC
T ss_pred             CCCCHHHHHHHHHCCCEEEC-CCCHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCC
T ss_conf             96788999999983993773-78845615884499864664999964135313566654200122210133126606898


Q ss_pred             CEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCC
Q ss_conf             6486687329999888998499827998601343112503423207877554236674438999951686-527983398
Q gi|254780480|r   76 GTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGS  154 (367)
Q Consensus        76 g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~  154 (367)
                      +|+|+||++||++|.|+|++|+|++|.++||||++|+|++++++++      ++||||.|+++||+.|.+ .||.|++||
T Consensus        80 ~~~l~pg~~~l~~t~E~v~lp~~~~~~~~~rSs~~R~Gl~~~~~~g------~~dpG~~G~~~lel~n~~~~pi~l~~g~  153 (193)
T 1xs1_A           80 AFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAH------RIDPGWSGCIVLEFYNSGKLPLALRPGM  153 (193)
T ss_dssp             CEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCC------EECTTCEEEEEEEEEECSSSCEEECTTS
T ss_pred             EEEECCCCEEEEEEEEEEECCCCEEEEEEECCCHHEEEEEEECCCC------CCCCCCCCEEEEEEEECCCCCEEECCCC
T ss_conf             1997699789999740164045489999965604402248732565------2379997428999995687757973899


Q ss_pred             EEEEEEEEECC
Q ss_conf             03568985088
Q gi|254780480|r  155 RLSQIRFVKER  165 (367)
Q Consensus       155 rl~Qi~f~~g~  165 (367)
                      |||||+|++-.
T Consensus       154 ~i~Qlvf~~~~  164 (193)
T 1xs1_A          154 LIGALSFEPLS  164 (193)
T ss_dssp             EEEEEEEEECS
T ss_pred             EEEEEEEEECC
T ss_conf             99999999888


No 5  
>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, iodide phasing, hydrolase; 2.10A {Anaplasma phagocytophilum HZ}
Probab=100.00  E-value=2.6e-35  Score=248.90  Aligned_cols=148  Identities=18%  Similarity=0.213  Sum_probs=121.9

Q ss_pred             CCCCHHHHHHHHHCCCEEECCCCCHHH---------CCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECC
Q ss_conf             615868999999879849817898656---------57122588758989998123157888621100024047887368
Q gi|254780480|r    4 GVLPDKAIATLAERGDIVSEHPLEKNQ---------IQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLS   74 (367)
Q Consensus         4 GILsd~~I~~li~~g~I~i~~p~~~~Q---------IQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~   74 (367)
                      .||||++|++++.+..+ |+ ||+++|         +||+|+|||||++|+.++....+..+..    ..+........+
T Consensus        23 sILsD~~Ik~l~~~~~m-I~-PF~~~~v~~~~is~gL~p~syDlRLg~~f~vf~~~~~~~~d~~----~~~~~~~~~~~~   96 (206)
T 3km3_A           23 SVMPDHWIKERALKDGM-IS-PFVDHKEGTGVLSYGLSSYGYDARLDNKFKIFANTHSVVVDPK----NFSQDSFVDREG   96 (206)
T ss_dssp             EECCHHHHHHHHHHHCC-EE-SCCSSCBSSSSSCBEEETTEEEEEEEEEEEEECCTTCCCCBTT----BCCGGGEEEEES
T ss_pred             EEECHHHHHHHHHHCCC-CC-CCCHHCCCCCEEECCCCCCCEEEEECCEEEEEECCCCCCCCCC----CCCCCEEEECCC
T ss_conf             66089999997744797-16-8631114665032045865012685454799604566645843----235305895589


Q ss_pred             CCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECC
Q ss_conf             86486687329999888998499827998601343112503423207877554236674438999951686-52798339
Q gi|254780480|r   75 GGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVG  153 (367)
Q Consensus        75 ~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G  153 (367)
                      ++|+|+||++||+.|.|++++|+|++|++++|||++|+|+.++.+        .+||||+|+|||||+|.+ .||+||||
T Consensus        97 ~~~iL~Pg~~~L~~T~E~i~lP~~i~~~~~~rSs~aR~Gl~v~~t--------~iDpGf~G~ltLel~N~~~~pi~ly~G  168 (206)
T 3km3_A           97 DFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIVVNVT--------PLEPGWSGYVTLEFSNTSPLPVKVYAF  168 (206)
T ss_dssp             SEEEECTTEEEEEEEEEEEECCTTEEEEEECCHHHHTTTEEECCC--------CBCTTCEEEEEEEEEECSSSCEEEETT
T ss_pred             CEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCC--------CCCCCCCCEEEEEEEECCCCCEEEECC
T ss_conf             839984994899998667774898779996224300153503675--------237987747999999777998898089


Q ss_pred             CEEEEEEEEECC
Q ss_conf             803568985088
Q gi|254780480|r  154 SRLSQIRFVKER  165 (367)
Q Consensus       154 ~rl~Qi~f~~g~  165 (367)
                      |+|||+.|++..
T Consensus       169 ~~I~QlvF~~~~  180 (206)
T 3km3_A          169 EGACQFLFFSGK  180 (206)
T ss_dssp             SEEEEEEEEEC-
T ss_pred             CEEEEEEEEECC
T ss_conf             979999999878


No 6  
>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A
Probab=100.00  E-value=3.4e-34  Score=241.64  Aligned_cols=143  Identities=20%  Similarity=0.319  Sum_probs=119.9

Q ss_pred             CCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCC
Q ss_conf             76158689999998798498178986565712258875898999812315788862110002404788736886486687
Q gi|254780480|r    3 KGVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDAN   82 (367)
Q Consensus         3 ~GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg   82 (367)
                      -+||||++|+++++++   ++ |++++||||||+|||||++.+.....     ...+.  .+.....+++..++++|+||
T Consensus        10 mMiLsd~~I~~li~~~---i~-p~~~~~iqp~s~DLrLg~~~~~~~~~-----~~~~~--~~~~~~~~~~~~e~~vl~Pg   78 (169)
T 2yzj_A           10 LMILSHQSIKNLLGKV---IL-NYSEENVRENGYDLRICGDKYYELVQ-----GAELP--EKKATLREIEFKERAILSAN   78 (169)
T ss_dssp             --CCCHHHHHTTBTTT---EE-SCCGGGBCSSSEEEEEEEEEEEEEEE-----CCEET--TBCCEEEEEECSSEEEECTT
T ss_pred             EEEECHHHHHHHHHCC---CC-CCCHHHCCCCEEEEEECCEEEEEECC-----CCCCC--CCCCCEEEECCCCCEEECCC
T ss_conf             8997899999999717---67-89977868866999932879998547-----65368--75563379537983898899


Q ss_pred             CEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEEE
Q ss_conf             32999988899849982799860134311250342320787755423667443899995168652798339803568985
Q gi|254780480|r   83 CVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFV  162 (367)
Q Consensus        83 ~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI~v~~G~rl~Qi~f~  162 (367)
                      ++||++|.|++++|+|++|++++|||++|+|++++..        .|||||+|+++||+.| +.|+.+++|||++||+|+
T Consensus        79 ~~~lv~T~E~i~lP~~~~g~v~~RSsl~R~Gl~~~~~--------~iDpGy~G~l~l~l~n-~~~~~i~~G~riaQlvF~  149 (169)
T 2yzj_A           79 HTYLFESCEEFNMPADLAVLITLKSTLARNGFLAPPT--------VIDAGYKGKVNVAITA-VYNSSLKKGMATHHLIFL  149 (169)
T ss_dssp             EEEEEEEEEEEECCTTEEEEEEECHHHHTTTEECCCE--------EECTTCEEEEEEEEEE-SSSEEEETTCEEEEEEEE
T ss_pred             CEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCC--------CCCCCCCCEEEEEEEC-CCCCEEECCCEEEEEEEE
T ss_conf             6999999218806998999999578612277687251--------0398975559999992-888277379989999999


Q ss_pred             ECC
Q ss_conf             088
Q gi|254780480|r  163 KER  165 (367)
Q Consensus       163 ~g~  165 (367)
                      +..
T Consensus       150 ~~~  152 (169)
T 2yzj_A          150 KLD  152 (169)
T ss_dssp             ECS
T ss_pred             ECC
T ss_conf             776


No 7  
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A*
Probab=100.00  E-value=1.4e-33  Score=237.64  Aligned_cols=184  Identities=20%  Similarity=0.294  Sum_probs=149.4

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHH----HHHHC
Q ss_conf             76899999998752786036655443373167888145545666630455126775130156555587786----64311
Q gi|254780480|r  166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDF----WDPLF  241 (367)
Q Consensus       166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~df----we~i~  241 (367)
                      ++|||.++++++++..|+.++.++. .+-.+.|+||+..    +.+..|++ .+++.+|.+.........+    |++..
T Consensus         1 MiLSd~~I~~~i~~g~i~i~P~~~~-~~iqp~s~DLrLg----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (193)
T 1xs1_A            1 MRLCDRDIEAWLDEGRLSINPRPPV-ERINGATVDVRLG----NKFRTFRG-HTAAFIDLSGPKDEVSAALDRVMSDEIV   74 (193)
T ss_dssp             CBCCHHHHHHHHHHTSSEEESCCCG-GGEETTEEEEEBC----SEEBCBCG-GGCSCEETTSCHHHHHHHHHHHBCCCEE
T ss_pred             CCCCHHHHHHHHHCCCEEECCCCHH-HHCCCCEEEEECC----CEEEEEEC-CCCCCCCCCCCCCCCHHHHHCCCCCEEE
T ss_conf             9678899999998399377378845-6158844998646----64999964-1353135666542001222101331266


Q ss_pred             CCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECC--CCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC--C
Q ss_conf             3557775399889978999863344428340164453043--33421342160456886654345667504788617--8
Q gi|254780480|r  242 SWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDH--SIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS--S  317 (367)
Q Consensus       242 ~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~--~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~--~  317 (367)
                      .  ..++.++|+||+|||+.|.|+|++|+|++|++.+.++  |.|.+.+++|||+||||.|.++        ||+.+  .
T Consensus        75 ~--~~~~~~~l~pg~~~l~~t~E~v~lp~~~~~~~~~rSs~~R~Gl~~~~~~g~~dpG~~G~~~--------lel~n~~~  144 (193)
T 1xs1_A           75 L--DEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIV--------LEFYNSGK  144 (193)
T ss_dssp             C--CTTCCEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCCEECTTCEEEEE--------EEEEECSS
T ss_pred             E--CCCCEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCHHEEEEEEECCCCCCCCCCCCEEE--------EEEEECCC
T ss_conf             0--6898199769978999974016404548999996560440224873256523799974289--------99995687


Q ss_pred             CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHHHHH
Q ss_conf             88899479888999997637664222375434723266-6773443430
Q gi|254780480|r  318 VPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKHFHQ  365 (367)
Q Consensus       318 ~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~f~~  365 (367)
                      .||.|++||+||||+|++|.++++++|+...+||||+| |+++||+|+.
T Consensus       145 ~pi~l~~g~~i~Qlvf~~~~~~~~~~Y~~~~~g~Yq~q~g~~~Sk~~~d  193 (193)
T 1xs1_A          145 LPLALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRIDKD  193 (193)
T ss_dssp             SCEEECTTSEEEEEEEEECSSCCSSCGGGCTTCSCSSBCSCCCCCGGGC
T ss_pred             CCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             7579738999999999988887431147777976788889877453579


No 8  
>2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis H37RV} PDB: 2qlp_A*
Probab=99.98  E-value=1.3e-31  Score=224.71  Aligned_cols=180  Identities=25%  Similarity=0.371  Sum_probs=142.8

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCC
Q ss_conf             76899999998752786036655443373167888145545666630455126775130156555587786643113557
Q gi|254780480|r  166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDA  245 (367)
Q Consensus       166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~~~~~  245 (367)
                      ++|||.+++++.++..++.++.++  .+-.+.|+||+..    +.+   +..+.++...++..+  +..++|+.....+ 
T Consensus         1 MILsd~~I~~~i~~g~i~I~Pf~~--~~iqpas~DLrLg----~~~---~v~~~~~~~~id~~~--~~~~~~~~~~~~~-   68 (190)
T 2qxx_A            1 MLLSDRDLRAEISSGRLGIDPFDD--TLVQPSSIDVRLD----CLF---RVFNNTRYTHIDPAK--QQDELTSLVQPVD-   68 (190)
T ss_dssp             CBCCHHHHHHHHHTTSSEEESCCG--GGEETTEEEEEBC----SCE---EECCCSSCSCCCTTS--CCGGGSEEECCCT-
T ss_pred             CCCCHHHHHHHHHCCCEEECCCCH--HHCCCCCEEEEEC----CEE---EEEECCCCCCCCCCC--CCCCCCEEEECCC-
T ss_conf             916889999999859926858997--8838761737824----638---995044676445310--3443200245068-


Q ss_pred             CCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEEC--CCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC--CCCEE
Q ss_conf             77539988997899986334442834016445304--333421342160456886654345667504788617--88889
Q gi|254780480|r  246 PEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYD--HSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS--SVPFV  321 (367)
Q Consensus       246 ~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~--~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~--~~p~~  321 (367)
                       .+.++|+||+|||+.|.|+|++|+|++|.+.+.+  +|.|.+.+++|||+||||.|.++        ||+.+  ..|+.
T Consensus        69 -~~~~~l~Pg~~~L~~T~E~i~lp~~~~~~~~~rSs~~R~Gl~~~~~ag~iDpGy~G~l~--------lel~n~~~~~i~  139 (190)
T 2qxx_A           69 -GEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHIT--------LELSNVANLPIT  139 (190)
T ss_dssp             -TCCEEECTTCEEEEEBSSEEECCTTEEEEEECCHHHHTTTEEECCTTCEECTTCEECCE--------EEEEECSSSCEE
T ss_pred             -CCEEEECCCEEEEEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEE--------EEEEECCCCCEE
T ss_conf             -98699759919999966788659998999970572875671023346652799766489--------999937885779


Q ss_pred             EECCCEEEEEEEEECCCCCCCCCCC-CCCCCCCCC-CCCHHHHHHHC
Q ss_conf             9479888999997637664222375-434723266-67734434305
Q gi|254780480|r  322 LEHGQIIGRLKYESMDGEPERLYGE-ARGSHYQSQ-ALKLSKHFHQT  366 (367)
Q Consensus       322 l~~g~~i~~l~~~~~~~~p~~~Yg~-~~~s~Yq~Q-gl~lsk~f~~~  366 (367)
                      |++||+||||+|++|+++++++||. ..++|||+| |+++||.|++.
T Consensus       140 i~~G~riaQlvf~~~~~~~~~~Y~~~~~~gkYq~q~g~~~Sk~~~df  186 (190)
T 2qxx_A          140 LWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNF  186 (190)
T ss_dssp             ECTTSEEEEEEEEECSSCCSSCTTSGGGTCSCTTCCSCCCCCTTTTC
T ss_pred             ECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
T ss_conf             83899999999998658765454345468878888998750021264


No 9  
>3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, iodide phasing, hydrolase; 2.10A {Anaplasma phagocytophilum HZ}
Probab=99.97  E-value=3.5e-31  Score=221.95  Aligned_cols=175  Identities=14%  Similarity=0.155  Sum_probs=135.0

Q ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCC-CCC-----CC-EEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHH
Q ss_conf             88768999999987527860366554-433-----73-167888145545666630455126775130156555587786
Q gi|254780480|r  164 ERKFCSQEELSALHELSPLVQDGLRD-FSG-----KG-VALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDF  236 (367)
Q Consensus       164 g~~~LsD~eL~~lh~~~~LV~~~~~~-~~~-----~G-l~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~df  236 (367)
                      +-++|||.+++++..++.++. +..+ ..+     -| .+.|+||+..    +.+.-|+. .+..++|..+..      .
T Consensus        21 ~MsILsD~~Ik~l~~~~~mI~-PF~~~~v~~~~is~gL~p~syDlRLg----~~f~vf~~-~~~~~~d~~~~~------~   88 (206)
T 3km3_A           21 SMSVMPDHWIKERALKDGMIS-PFVDHKEGTGVLSYGLSSYGYDARLD----NKFKIFAN-THSVVVDPKNFS------Q   88 (206)
T ss_dssp             CCEECCHHHHHHHHHHHCCEE-SCCSSCBSSSSSCBEEETTEEEEEEE----EEEEEECC-TTCCCCBTTBCC------G
T ss_pred             CCEEECHHHHHHHHHHCCCCC-CCCHHCCCCCEEECCCCCCCEEEEEC----CEEEEEEC-CCCCCCCCCCCC------C
T ss_conf             406608999999774479716-86311146650320458650126854----54799604-566645843235------3


Q ss_pred             HHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC
Q ss_conf             64311355777539988997899986334442834016445304333421342160456886654345667504788617
Q gi|254780480|r  237 WDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS  316 (367)
Q Consensus       237 we~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~  316 (367)
                      ++.+.   ..++.|+|+||+|||+.|.|+|++|+|++|.+.+.++.++.+..|+|||+||||.|.+|        ||+.+
T Consensus        89 ~~~~~---~~~~~~iL~Pg~~~L~~T~E~i~lP~~i~~~~~~rSs~aR~Gl~v~~t~iDpGf~G~lt--------Lel~N  157 (206)
T 3km3_A           89 DSFVD---REGDFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIVVNVTPLEPGWSGYVT--------LEFSN  157 (206)
T ss_dssp             GGEEE---EESSEEEECTTEEEEEEEEEEEECCTTEEEEEECCHHHHTTTEEECCCCBCTTCEEEEE--------EEEEE
T ss_pred             CEEEE---CCCCEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE--------EEEEE
T ss_conf             05895---58983998499489999866777489877999622430015350367523798774799--------99997


Q ss_pred             --CCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHH
Q ss_conf             --888899479888999997637664222375434723266-6773443
Q gi|254780480|r  317 --SVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKH  362 (367)
Q Consensus       317 --~~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~  362 (367)
                        +.|+.|++||+||||+|++|+++++.+|+ +.++|||+| |.+|.|-
T Consensus       158 ~~~~pi~ly~G~~I~QlvF~~~~~~~~~~Y~-~~~GkYq~q~g~t~p~~  205 (206)
T 3km3_A          158 TSPLPVKVYAFEGACQFLFFSGKERCSKSYD-EAGGKYMGQSDVTLPII  205 (206)
T ss_dssp             CSSSCEEEETTSEEEEEEEEEC---------------------------
T ss_pred             CCCCCEEEECCCEEEEEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCC
T ss_conf             7799889808997999999987876666667-77987599989878885


No 10 
>1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A*
Probab=99.96  E-value=2.5e-29  Score=209.86  Aligned_cols=183  Identities=17%  Similarity=0.178  Sum_probs=136.2

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECC-----CCC--------EEECCCCCCCC
Q ss_conf             76899999998752786036655443373167888145545666630455126-----775--------13015655558
Q gi|254780480|r  166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKR-----HTA--------AIDVDSENKYD  232 (367)
Q Consensus       166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkk-----ht~--------~IDl~k~~~y~  232 (367)
                      ++|||.+++++.++..++.++.+.  .+-.+.|+||+..    +.+..|+...     ...        ...+...+...
T Consensus         1 MILsd~~I~~~i~~g~i~I~Pf~~--~~i~p~s~DlrLg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (204)
T 1pkh_A            1 MILSDKDIIDYVTSKRIIIKPFNK--DFVGPCSYDVTLG----DEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNL   74 (204)
T ss_dssp             CBCCHHHHHHHHHTTSSEEESCCG--GGBCSSCEEEEBC----SEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCC
T ss_pred             CCCCHHHHHHHHHCCCEEECCCCH--HHCCCCEEEEEEC----CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             927889999998769867847896--7648744888726----8799960511365445652101356421015554333


Q ss_pred             HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEECCEEECCCCCCCCCCCCCCEE
Q ss_conf             77866431135577753998899789998633444283401644--5304333421342160456886654345667504
Q gi|254780480|r  233 ESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKA  310 (367)
Q Consensus       233 ~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~  310 (367)
                      .+..++.+...  .+..++++|+  ||+.|.|+|++|+|++|.+  +++.+|.|.+.+++|||+||||.|..        
T Consensus        75 ~~~~~~~~~~~--~~~~~~~~~~--~L~~t~E~v~lP~~i~~~~~~rSS~aR~Gl~v~~tag~iDpGy~G~l--------  142 (204)
T 1pkh_A           75 TEEKINYFKEK--YNVDYVVEGG--VLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAGWIDAGFKGKI--------  142 (204)
T ss_dssp             CHHHHHHHHHH--HCCSEEEESC--EEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCCEECTTCEEEE--------
T ss_pred             CCCCCEEECCC--CCCEECCCCC--EEEEEEEEEECCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCEE--------
T ss_conf             43220220036--6731405871--89998889962898189998146276477212344654888977669--------


Q ss_pred             EEEECC-CCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHC
Q ss_conf             788617-888899479888999997637664222375434723266-67734434305
Q gi|254780480|r  311 VLEVRS-SVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKHFHQT  366 (367)
Q Consensus       311 vLevr~-~~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~f~~~  366 (367)
                      +||+.+ ..|+.|++||+||||+|++|+++|+.+|+...+++||+| |++.||.|+.-
T Consensus       143 tLei~n~~~pi~i~~G~~I~QlvF~~~~~~~~~~Y~~~~~g~Yq~q~g~~~S~~~~d~  200 (204)
T 1pkh_A          143 TLEIVAFDKPVILYKNQRIGQLIFSKLLSPADVGYSERKTSKYAYQKSVMPSLIHLDN  200 (204)
T ss_dssp             EEEEEESSSCEEEETTCEEEEEEEEECSSCCCCSEEEECC------------------
T ss_pred             EEEEEECCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999978989898389999999999777775556555658714788998631200565


No 11 
>2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A
Probab=99.91  E-value=9.1e-24  Score=173.57  Aligned_cols=161  Identities=17%  Similarity=0.188  Sum_probs=118.8

Q ss_pred             ECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHCC
Q ss_conf             08876899999998752786036655443373167888145545666630455126775130156555587786643113
Q gi|254780480|r  163 KERKFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFS  242 (367)
Q Consensus       163 ~g~~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~~  242 (367)
                      ...++|||.+++++-++  ++ .+.+  ..+-.+.|+||+..    +.  .|....+...++.+....       +++. 
T Consensus         8 ~~mMiLsd~~I~~li~~--~i-~p~~--~~~iqp~s~DLrLg----~~--~~~~~~~~~~~~~~~~~~-------~~~~-   68 (169)
T 2yzj_A            8 EKLMILSHQSIKNLLGK--VI-LNYS--EENVRENGYDLRIC----GD--KYYELVQGAELPEKKATL-------REIE-   68 (169)
T ss_dssp             ----CCCHHHHHTTBTT--TE-ESCC--GGGBCSSSEEEEEE----EE--EEEEEEECCEETTBCCEE-------EEEE-
T ss_pred             CCEEEECHHHHHHHHHC--CC-CCCC--HHHCCCCEEEEEEC----CE--EEEEECCCCCCCCCCCCE-------EEEC-
T ss_conf             77899789999999971--76-7899--77868866999932----87--999854765368755633-------7953-


Q ss_pred             CCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEE
Q ss_conf             55777539988997899986334442834016445304333421342160456886654345667504788617888899
Q gi|254780480|r  243 WDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVL  322 (367)
Q Consensus       243 ~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l  322 (367)
                         .++.++|+||+||++.|.|+|++|+|++|.+.+.++..+.+..+++|++||||.|.+        +||+.+..|+.|
T Consensus        69 ---~~e~~vl~Pg~~~lv~T~E~i~lP~~~~g~v~~RSsl~R~Gl~~~~~~iDpGy~G~l--------~l~l~n~~~~~i  137 (169)
T 2yzj_A           69 ---FKERAILSANHTYLFESCEEFNMPADLAVLITLKSTLARNGFLAPPTVIDAGYKGKV--------NVAITAVYNSSL  137 (169)
T ss_dssp             ---CSSEEEECTTEEEEEEEEEEEECCTTEEEEEEECHHHHTTTEECCCEEECTTCEEEE--------EEEEEESSSEEE
T ss_pred             ---CCCCEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCEE--------EEEEECCCCCEE
T ss_conf             ---798389889969999992188069989999995786122776872510398975559--------999992888277


Q ss_pred             ECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             47988899999763766422237543472326667
Q gi|254780480|r  323 EHGQIIGRLKYESMDGEPERLYGEARGSHYQSQAL  357 (367)
Q Consensus       323 ~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl  357 (367)
                      +.||+||||+|++|.++++++|    .++||||.|
T Consensus       138 ~~G~riaQlvF~~~~~~~~~~Y----~G~YQG~~~  168 (169)
T 2yzj_A          138 KKGMATHHLIFLKLDKPTERLY----NGKYQGGIL  168 (169)
T ss_dssp             ETTCEEEEEEEEECSSCCSSCC----CSTTTTTCC
T ss_pred             ECCCEEEEEEEEECCCCCCCCC----CCEECCCEE
T ss_conf             3799899999997767777881----889078573


No 12 
>2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str}
Probab=99.85  E-value=2.1e-20  Score=151.62  Aligned_cols=151  Identities=17%  Similarity=0.235  Sum_probs=86.2

Q ss_pred             CCCCCHHHHHHHHHCCCEEECCCCCHHHCC---CCEEEEEECC----EEEEEECCCCCCCC-CCHHH-HCCCC-EEEEEE
Q ss_conf             761586899999987984981789865657---1225887589----89998123157888-62110-00240-478873
Q gi|254780480|r    3 KGVLPDKAIATLAERGDIVSEHPLEKNQIQ---PASIDLRLSS----KAYRVRASFLPNID-GLVSD-KIKHF-KLREID   72 (367)
Q Consensus         3 ~GILsd~~I~~li~~g~I~i~~p~~~~QIQ---PaSiDLRLG~----~~~rv~asflp~~~-~~v~~-~l~~~-~~~eid   72 (367)
                      +-.|||.+++++-++..|+.+.  ....+.   .-||||....    ..||-+.+. +..| .++.. +..++ +.....
T Consensus       172 ~~~lsd~~l~~lh~~~~lv~~~--~~~~~~~gl~lsVdL~~~~~~~iigyrAk~h~-~~Id~~k~~~y~~~~fwe~i~~~  248 (370)
T 2r9q_A          172 HALLNESEVLKLHETETLVASE--NPNVTGGGIALSIDLKGFGENGLIGYRGKHHT-AVVDVDKKAQHDVLDFWEPLFAR  248 (370)
T ss_dssp             CCBCCHHHHHHHHHHSCSBC-----CCCCC--EEEEBCCSCCTTTTEEEEEECSSC-CCEETTCGGGSCGGGTEEEEECC
T ss_pred             CCCCCHHHHHHHHHCCCCCCCC--CCCCCCCCCEEEEEECCCCCCCCEEEECCCCC-CCEEECCCCCCCHHHHHHEEECC
T ss_conf             7666889999877408732477--54414788258998335677871799614678-83660565524687843102127


Q ss_pred             CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCE--------EEEEEECCC
Q ss_conf             688648668732999988899849982799860134311250342320787755423667443--------899995168
Q gi|254780480|r   73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSG--------PLYLEILPR  144 (367)
Q Consensus        73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G--------~l~lEI~~~  144 (367)
                      -++.++|+||++||+.|.|+|++|+|++|.+.||||++|.|+..  .    ++|  +||||.|        +++||+.+.
T Consensus       249 ~~~~~iL~P~ef~l~~T~E~v~iP~~~aa~~~~rs~~~r~g~~~--~----agf--~DpGf~g~~~~~~g~~~vLev~~~  320 (370)
T 2r9q_A          249 GRAELILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVH--Y----AGF--FDPGFGHAQAGGTGSRAVLEVRSH  320 (370)
T ss_dssp             SSSEEEECTTCCEEEEEEEEECCCTTEEEEEEECGGGTTTEEEE--S----CCE--ECTTTTC-----CCEEEEEEEEEC
T ss_pred             CCCEEEEECCCEEEEEEEEEEEECCCEEEEEEEECHHHCCCEEE--C----CCC--CCCCCCCCCCCCCCCEEEEEEECC
T ss_conf             89779996797999999999997897399997043432582676--4----751--769987644556685599999269


Q ss_pred             CCCEEEECCCEEEEEEEEEC
Q ss_conf             65279833980356898508
Q gi|254780480|r  145 TFPIVVRVGSRLSQIRFVKE  164 (367)
Q Consensus       145 sfpI~v~~G~rl~Qi~f~~g  164 (367)
                      ..|+.+++|||||||+|.+-
T Consensus       321 ~~p~~l~~G~~I~qlvfe~l  340 (370)
T 2r9q_A          321 EVPFILEHGQIVGRLVYEHM  340 (370)
T ss_dssp             SSCEEEETTCEEEEEEEEEB
T ss_pred             CCCEEEECCCEEEEEEEEEC
T ss_conf             88869838999999999998


No 13 
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A
Probab=99.61  E-value=1.5e-15  Score=119.90  Aligned_cols=84  Identities=13%  Similarity=0.171  Sum_probs=76.4

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC
Q ss_conf             886486687329999888998499827998601343112503423207877554236674438999951686-5279833
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV  152 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~  152 (367)
                      .+..+++||+.++++|.|++++|++..|++.||||++|.||.++..        .||+||+|+|++++.|.+ .|+.+++
T Consensus        24 ~~d~~i~pg~~~~i~tg~~i~iP~~~~~~i~~RSsl~k~gl~v~~g--------vID~gy~G~l~v~l~N~~~~~~~i~~   95 (134)
T 1dun_A           24 PYDIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGLLINGG--------IIDEGYTGEIQVICTNIGKSNIKLIE   95 (134)
T ss_dssp             SSCEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTEEEECC--------EEETTCCSCCEEEEEECSSSCEEECT
T ss_pred             CCCEEECCCCEEEEECCCEEECCCCEEEEEECCCHHCCCCCCCCCE--------EECCCCCCEEEEEEEECCCCCEEECC
T ss_conf             9898999999899988739976862799998666320278312433--------87688864699999989998779848


Q ss_pred             CCEEEEEEEEECC
Q ss_conf             9803568985088
Q gi|254780480|r  153 GSRLSQIRFVKER  165 (367)
Q Consensus       153 G~rl~Qi~f~~g~  165 (367)
                      |+|||||.|.+-.
T Consensus        96 G~rIaQlv~~~~~  108 (134)
T 1dun_A           96 GQKFAQLIILQHH  108 (134)
T ss_dssp             TCEEEEEEEEECC
T ss_pred             CCEEEEEEEEECC
T ss_conf             9969999997868


No 14 
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A*
Probab=99.57  E-value=9.5e-13  Score=101.63  Aligned_cols=188  Identities=13%  Similarity=0.018  Sum_probs=132.1

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC
Q ss_conf             886486687329999888998499827998601343112503423207877554236674438999951686-5279833
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV  152 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~  152 (367)
                      .+..+|+||+..+++|--++.+|++.++.+.+|||.|   +++++-        .||+||+|+|.+=+.|.+ -|+.+.|
T Consensus        31 ~~~i~l~pge~~~i~tGi~~~iP~g~~~~l~~rS~~~---~~~~~G--------vID~gYrGei~v~l~N~~~~~~~i~~   99 (278)
T 2bsy_A           31 KTTILLRPMKTTTVDLGLYARPPEGHGLMLWGSTSRP---VTSHVG--------IIDPGYTGELRLILQNQRRYNSTLRP   99 (278)
T ss_dssp             SSCEEECTTSEEEEEEEEEEECCTTEEEEEEEECSSS---EEECCE--------EECTTCCSCEEEEEEESSSSCEEECT
T ss_pred             CCCEEECCCCEEEECCCEEEECCCCEEEEEECCCCCC---CCCCCC--------CCCCCCCCEEEEEEEECCCCCEEECC
T ss_conf             9998988998279658869977999189997576886---214665--------27599973789999948998778869


Q ss_pred             CCEEEEEEEEEC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCC
Q ss_conf             980356898508-8768999999987527860366554433731678881455456666304551267751301565555
Q gi|254780480|r  153 GSRLSQIRFVKE-RKFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKY  231 (367)
Q Consensus       153 G~rl~Qi~f~~g-~~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y  231 (367)
                      |+.-..|.+++- -+.....               ..           +|..        .     ++.      .-..|
T Consensus       100 G~l~~~l~~~~~~~P~~~~~---------------~~-----------~l~~--------P-----~~~------~DAG~  134 (278)
T 2bsy_A          100 SELKIHLAAFRYATPQMEED---------------KG-----------PINH--------P-----QYP------GDVGL  134 (278)
T ss_dssp             TSCEEEEEEEEEECCCC-------------------C-----------CBCC--------C-----SST------TCCCE
T ss_pred             CCEEEEEEEEEECCCCEECC---------------CC-----------CCCC--------C-----CCC------CCCEE
T ss_conf             85899998887216713147---------------56-----------4789--------9-----888------76216


Q ss_pred             CHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEEC--CCCCCEEEECCEEECCCCCCCCCCCCCCE
Q ss_conf             8778664311355777539988997899986334442834016445304--33342134216045688665434566750
Q gi|254780480|r  232 DESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYD--HSIGEFRVHYAGFFDPGFGCVLPQEVGAK  309 (367)
Q Consensus       232 ~~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~--~~~g~~r~h~AGf~DpGf~~~~~~~~~~~  309 (367)
                      |       +++    ...++|+|++..+..|--.+.+|+++++.+.+.+  +.-|.. +....    |+.|.+      .
T Consensus       135 D-------l~~----~~d~~i~P~~~~~i~tgi~~~~p~~~~~~I~~RSsla~kGl~-v~~~~----~y~Gei------~  192 (278)
T 2bsy_A          135 D-------VSL----PKDLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLAMQGIL-VKPCR----WRRGGV------D  192 (278)
T ss_dssp             E-------EEC----SSCEEECTTCEEEEEECSCCCCCTTEEEEEECCHHHHHTTEE-ECCEE----CBTTBE------E
T ss_pred             E-------EEE----CCCEEECCCCEEEEECCEEEECCCCEEEEEEECCCCCCCCEE-EECCC----EECCEE------E
T ss_conf             7-------995----886899999889997486996799839999856502448989-95994----035569------9


Q ss_pred             EEEEECCCCCEEEECCCEEEEEEEEECCCC
Q ss_conf             478861788889947988899999763766
Q gi|254780480|r  310 AVLEVRSSVPFVLEHGQIIGRLKYESMDGE  339 (367)
Q Consensus       310 ~vLevr~~~p~~l~~g~~i~~l~~~~~~~~  339 (367)
                      ..|.+.++.|+.++.|+|||||+|.+....
T Consensus       193 v~l~N~~~~~~~I~~G~RIAQlvf~~~~~~  222 (278)
T 2bsy_A          193 VSLTNFSDQTVFLNKYRRFCQLVYLHKHHL  222 (278)
T ss_dssp             EEEEECSSSCEEECTTCEEEEEEEEEGGGE
T ss_pred             EEEEECCCCCEEECCCCEEEEEEEEECCCC
T ss_conf             999989898789789997999999513446


No 15 
>1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A
Probab=99.49  E-value=9.4e-14  Score=108.19  Aligned_cols=85  Identities=19%  Similarity=0.169  Sum_probs=76.7

Q ss_pred             CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE
Q ss_conf             6886486687329999888998499827998601343112503423207877554236674438999951686-527983
Q gi|254780480|r   73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR  151 (367)
Q Consensus        73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~  151 (367)
                      ..+..+|+|++.++++|.+++.+|.+..+.+.||||++|.||.++.        ..||+||+|+|++.+.|.+ .|+.+.
T Consensus        22 ~~e~~~i~P~~~~~i~Tg~~i~~p~~~~~~i~~RSsl~~~gl~v~~--------GvID~gY~Gei~v~l~N~~~~~~~i~   93 (136)
T 1f7d_A           22 AAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLG--------GVIDEGYRGEIGVIMINVSRKSITLM   93 (136)
T ss_dssp             CSSCEEECTTCEEEEECCCEECCCTTEEEEEECCHHHHTTTEEEEC--------CEECTTCCSCCEEEEEECSSSCEEEC
T ss_pred             CCCCEEECCCCEEEEECCEEEECCCCCEEEEECCCCHHCEEEEEEE--------EEECCCCCCEEEEEEEECCCCCEEEC
T ss_conf             5988899999899997897998597759999826723120478655--------57888777668999999999988837


Q ss_pred             CCCEEEEEEEEECC
Q ss_conf             39803568985088
Q gi|254780480|r  152 VGSRLSQIRFVKER  165 (367)
Q Consensus       152 ~G~rl~Qi~f~~g~  165 (367)
                      +|+||+||.|.+-.
T Consensus        94 ~G~riaQlv~~~~~  107 (136)
T 1f7d_A           94 ERQKIAQLIILPCK  107 (136)
T ss_dssp             TTCEEEEEEEEECC
T ss_pred             CCCEEEEEEEECCC
T ss_conf             99989999995157


No 16 
>2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A
Probab=99.44  E-value=3.6e-13  Score=104.42  Aligned_cols=84  Identities=12%  Similarity=0.146  Sum_probs=76.2

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC
Q ss_conf             886486687329999888998499827998601343112503423207877554236674438999951686-5279833
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV  152 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~  152 (367)
                      .+..+++|++.++++|.+.+.+|++..|++.||||+++-+|++..        ..||+||+|+|++.+.|.+ .|+.+++
T Consensus        37 ~~d~~i~P~~~~~i~tgi~i~iP~g~~~~i~~RSsl~~kgl~v~~--------GvID~~YrGei~v~l~N~~~~~~~i~~  108 (147)
T 2ol1_A           37 AYDYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLKGIDIGG--------GVIDEDYRGNIGVILINNGKCTFNVNT  108 (147)
T ss_dssp             SSCEEECTTEEEEEECCEEECCCTTEEEEEECCHHHHTTTEEEEC--------CEECTTCCSCCEEEEEECSSSCEEECT
T ss_pred             CCCEEECCCCEEEEECCCEEECCCCCCCEEECCCCCEEEEEEECC--------EEECCCCCCCEEEEEEECCCCCEEECC
T ss_conf             867499999989998998868898760117036765157899686--------669977786689999947997778049


Q ss_pred             CCEEEEEEEEECC
Q ss_conf             9803568985088
Q gi|254780480|r  153 GSRLSQIRFVKER  165 (367)
Q Consensus       153 G~rl~Qi~f~~g~  165 (367)
                      |+||+||.|.+-.
T Consensus       109 G~rIaQlv~~~~~  121 (147)
T 2ol1_A          109 GDRIAQLIYQRIY  121 (147)
T ss_dssp             TCEEEEEEEEEEE
T ss_pred             CCEEEEEEEECCC
T ss_conf             9979999983366


No 17 
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica}
Probab=99.40  E-value=2.4e-12  Score=98.96  Aligned_cols=87  Identities=14%  Similarity=0.227  Sum_probs=76.5

Q ss_pred             EECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCE
Q ss_conf             7368864866873299998889984998279986013431-12503423207877554236674438999951686-527
Q gi|254780480|r   71 IDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPI  148 (367)
Q Consensus        71 idl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI  148 (367)
                      +--.+.++++|++.++++|-+++.+|++..|.+.||||++ |.++.+.  +      ..||+||+|+|.+.+.|.+ -++
T Consensus        50 L~a~ed~vI~P~~~~lI~TGi~i~iP~g~~~~i~~RSs~~~k~gl~~~--~------GvID~gYrGel~v~l~N~~~~~~  121 (163)
T 3lqw_A           50 LYSNTNFIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLALKYGIDVG--A------GVIDEDYRGEIKVILFNHSNEIF  121 (163)
T ss_dssp             EECSSCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEEC--C------CEECTTCCSEEEEEEEECSSSCE
T ss_pred             EECCCCEEECCCCEEEEECCCEEECCCCCEEEEEECCCCCCCCCEEEE--C------CEECCCCCEEEEEEEEECCCCCE
T ss_conf             955999899999889997884786598978999712673301434511--5------43946897199999998999865


Q ss_pred             EEECCCEEEEEEEEECC
Q ss_conf             98339803568985088
Q gi|254780480|r  149 VVRVGSRLSQIRFVKER  165 (367)
Q Consensus       149 ~v~~G~rl~Qi~f~~g~  165 (367)
                      .+.+|+|||||.|.+-.
T Consensus       122 ~I~~G~RIaQlv~~~~~  138 (163)
T 3lqw_A          122 NGRKGDRIAQLIIERIS  138 (163)
T ss_dssp             EECTTCEEEEEEEEECC
T ss_pred             ECCCCCEEEEEEEEECC
T ss_conf             04589999999860317


No 18 
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A*
Probab=99.35  E-value=3.4e-12  Score=98.04  Aligned_cols=84  Identities=17%  Similarity=0.244  Sum_probs=73.6

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE
Q ss_conf             8864866873299998889984998279986013431-12503423207877554236674438999951686-527983
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR  151 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~  151 (367)
                      .+..+++|++.++++|.+.+.+|++.+|++.||||++ |.+|.+..        ..||+||+|+|++.+.|.+ -|+.+.
T Consensus        31 ~~~~~i~p~~~~~i~tgi~~~ip~g~~g~i~~RSsl~~k~gL~~~~--------GvID~gYrGei~v~l~N~~~~~~~i~  102 (141)
T 3c2t_A           31 VEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLA--------GVIDEDYTGEVKVILYNTTERDYIIK  102 (141)
T ss_dssp             SSCEEECTTCEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEECC--------CEECTTCCSCCEEEEEECSSSCEEEC
T ss_pred             CCCCEECCCCEEEEECCCEEECCCEEEEEEEECCCCEEECCEEEEC--------EEECCCCCCEEEEEEEECCCCCEEEC
T ss_conf             9253978871599965843407860466898066782238979745--------37978888289999998999977710


Q ss_pred             CCCEEEEEEEEECC
Q ss_conf             39803568985088
Q gi|254780480|r  152 VGSRLSQIRFVKER  165 (367)
Q Consensus       152 ~G~rl~Qi~f~~g~  165 (367)
                      +|+||+||.|..-.
T Consensus       103 ~G~RIaQlv~~~~~  116 (141)
T 3c2t_A          103 KGDRIAQLILEQIV  116 (141)
T ss_dssp             TTCEEEEEEEEECC
T ss_pred             CCCEEEEEEECCCC
T ss_conf             89999999963657


No 19 
>3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster}
Probab=99.30  E-value=1.7e-11  Score=93.54  Aligned_cols=84  Identities=18%  Similarity=0.237  Sum_probs=73.5

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC
Q ss_conf             886486687329999888998499827998601343112503423207877554236674438999951686-5279833
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV  152 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~  152 (367)
                      .+..+++|++..+++|.+.+.+|++..|++.||||+++-+..+ ..+      ..||+||.|+|.+.+.|.+ -|+.+.+
T Consensus        49 ~~d~~i~p~~~~~i~Tgi~v~iP~g~~~~I~~RSsl~~k~~l~-~~~------GvID~dYrGei~v~l~N~~~~~~~i~~  121 (160)
T 3ecy_A           49 AYDVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFID-VGA------GVVDEDYRGNLGVVLFNHSDVDFEVKH  121 (160)
T ss_dssp             SSCEEECTTCEEEEECCEEEECCTTCEEEEECC-------CEE-EEC------EEECTTCCSCCEEEEEECSSSCEEECT
T ss_pred             CCCEEECCCCEEEEECCCEEECCCCEEEEEECCCCCEEECCEE-CCC------CCCCCCCCCCCCEEEEECCCCCEECCC
T ss_conf             6567999996699978975718999699997354050427700-577------743624255461999989998701589


Q ss_pred             CCEEEEEEEEEC
Q ss_conf             980356898508
Q gi|254780480|r  153 GSRLSQIRFVKE  164 (367)
Q Consensus       153 G~rl~Qi~f~~g  164 (367)
                      |+||+||.|.+-
T Consensus       122 G~RIaQlv~~~~  133 (160)
T 3ecy_A          122 GDRIAQFICERI  133 (160)
T ss_dssp             TCEEEEEEEEEE
T ss_pred             CCEEEEEEECCC
T ss_conf             998999998534


No 20 
>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A}
Probab=99.29  E-value=1.2e-11  Score=94.37  Aligned_cols=84  Identities=17%  Similarity=0.222  Sum_probs=74.0

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCC-CCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE
Q ss_conf             886486687329999888998499827998601343112-503423207877554236674438999951686-527983
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRI-DVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR  151 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRL-gif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~  151 (367)
                      .+..+|+|++..+++|...+.+|++..|.+.||||+++- +|.+.  +      ..||+||.|+|.+.+.|.+ -|+.+.
T Consensus        47 ~ed~~I~p~~~~~i~Tgi~i~ip~g~~~~I~~RSsl~~k~gl~~~--~------GvID~gYrGeI~v~l~N~~~~~~~I~  118 (165)
T 3ca9_A           47 VEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVL--A------GVIDEDYTGEVKVILYNTTERDYIIK  118 (165)
T ss_dssp             SSCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEEC--C------CEECTTCCSCCEEEEEECSSSCEEEC
T ss_pred             CCHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEECCEEEE--C------CEECCCCCCEEEEEEEECCCCCEEEE
T ss_conf             862113999659997896121786078899856656301887862--3------26866677278999997999986620


Q ss_pred             CCCEEEEEEEEECC
Q ss_conf             39803568985088
Q gi|254780480|r  152 VGSRLSQIRFVKER  165 (367)
Q Consensus       152 ~G~rl~Qi~f~~g~  165 (367)
                      +|+||+||.|..-.
T Consensus       119 ~G~RIaQlv~~~~~  132 (165)
T 3ca9_A          119 KGDRIAQLILEQIV  132 (165)
T ss_dssp             TTCEEEEEEEEECC
T ss_pred             CCCEEEEEEECCCC
T ss_conf             89999999974657


No 21 
>3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae}
Probab=99.29  E-value=1.3e-11  Score=94.26  Aligned_cols=82  Identities=16%  Similarity=0.263  Sum_probs=72.6

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE
Q ss_conf             8864866873299998889984998279986013431-12503423207877554236674438999951686-527983
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR  151 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~  151 (367)
                      .+.+++.|++..+++|...+.+|++..|++.||||++ |.++.+.  +      ..||+||+|+|.+.+.|.+ -|+.+.
T Consensus        36 ~ed~~i~p~~~~~I~tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~--~------GvID~dYrGei~v~l~N~~~~~~~i~  107 (147)
T 3p48_A           36 SQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTG--A------GVVDRDYTGEVKVVLFNHSQRDFAIK  107 (147)
T ss_dssp             SSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEC--C------CEECTTCCSCCEEEEEECSSSCEEEC
T ss_pred             CCCEEECCCCEEEEECCCEECCCCCCEEEEECCCCCCEEECCCCC--C------CCCCCCCCCCEEEEEEECCCCCEEEE
T ss_conf             889799999769997784100787516889735653201011057--6------62997887525999996799217994


Q ss_pred             CCCEEEEEEEEE
Q ss_conf             398035689850
Q gi|254780480|r  152 VGSRLSQIRFVK  163 (367)
Q Consensus       152 ~G~rl~Qi~f~~  163 (367)
                      +|+||+||.|.+
T Consensus       108 ~G~rIaQlv~~~  119 (147)
T 3p48_A          108 KGDRVAQLILEK  119 (147)
T ss_dssp             TTCEEEEEEEEE
T ss_pred             CCCEEEEEEEEC
T ss_conf             899799999821


No 22 
>3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphatase, DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A
Probab=99.28  E-value=1.4e-11  Score=94.03  Aligned_cols=83  Identities=16%  Similarity=0.254  Sum_probs=73.2

Q ss_pred             CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE
Q ss_conf             68864866873299998889984998279986013431-12503423207877554236674438999951686-52798
Q gi|254780480|r   73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV  150 (367)
Q Consensus        73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v  150 (367)
                      -.+..+++|++..+++|.+.+.+|++..|.+.||||++ +.++.+..        ..||+||+|+|.+.+.|.+ -|+.+
T Consensus        55 a~ed~vI~p~~~~~I~TGi~i~iP~g~~~~i~~RSsl~~k~gl~~~~--------GvID~gYrGei~v~l~N~~~~~~~i  126 (167)
T 3f4f_A           55 ASQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTGA--------GVVDRDYTGEVKVVLFNHSQRDFAI  126 (167)
T ss_dssp             CSSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEES--------CEECTTCCSCCEEEEEECSSSCEEE
T ss_pred             ECCCEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCCEEECC--------CEECCCCCEEEEEEEEECCCCCEEE
T ss_conf             18788999998899978909987999789996566653214578154--------3175788306999999569944799


Q ss_pred             ECCCEEEEEEEEE
Q ss_conf             3398035689850
Q gi|254780480|r  151 RVGSRLSQIRFVK  163 (367)
Q Consensus       151 ~~G~rl~Qi~f~~  163 (367)
                      .+|+||+||.|..
T Consensus       127 ~~GdRIaQlv~~~  139 (167)
T 3f4f_A          127 KKGDRVAQLILEK  139 (167)
T ss_dssp             CTTCEEEEEEEEE
T ss_pred             ECCCEEEEEEEEE
T ss_conf             6899299999830


No 23 
>3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolism; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A*
Probab=99.26  E-value=1.5e-11  Score=93.82  Aligned_cols=87  Identities=18%  Similarity=0.298  Sum_probs=75.5

Q ss_pred             CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC--CCEE
Q ss_conf             68864866873299998889984998279986013431-12503423207877554236674438999951686--5279
Q gi|254780480|r   73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT--FPIV  149 (367)
Q Consensus        73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s--fpI~  149 (367)
                      ..+..+|+|++.++++|-..+.+|++.+|.+.||||++ +.||.+...++      .||+||+|+|.+.+.|.+  -|+.
T Consensus        51 a~ed~~I~P~~~~~I~TGi~i~ip~g~~g~I~~RSsl~~K~gl~v~ns~G------iID~dYrGei~v~l~N~~~~~~~~  124 (174)
T 3hza_A           51 SAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPG------TIDAGYRGEIKVALINLDPAAPIV  124 (174)
T ss_dssp             CSSCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEETTSSE------EECTTCCSCCEEEEEECCSSCCEE
T ss_pred             CCCHHEECCCCEEEEECCEEEEECCCCCEEECCCCHHCCEECEEEECCCC------EECCCCCCCEEEEEEECCCCCCEE
T ss_conf             07231609997599978849971788612141663130250779706675------706887774799999699996689


Q ss_pred             EECCCEEEEEEEEECC
Q ss_conf             8339803568985088
Q gi|254780480|r  150 VRVGSRLSQIRFVKER  165 (367)
Q Consensus       150 v~~G~rl~Qi~f~~g~  165 (367)
                      +.+|+|||||.|.+-.
T Consensus       125 I~~G~RIaQlv~~~~~  140 (174)
T 3hza_A          125 VHRGDRIAQLLVQRVE  140 (174)
T ss_dssp             ECTTCEEEEEEEEECC
T ss_pred             ECCCCCEEEEEECCCC
T ss_conf             7389808999872358


No 24 
>2d4n_A DU; jelly roll, hydrolase; HET: UPR; 1.53A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A*
Probab=99.26  E-value=3.3e-11  Score=91.60  Aligned_cols=82  Identities=17%  Similarity=0.118  Sum_probs=69.6

Q ss_pred             CCCEEECCC-CEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEC
Q ss_conf             886486687-3299998889984998279986013431125034232078775542366744389999516865279833
Q gi|254780480|r   74 SGGTVLDAN-CVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRV  152 (367)
Q Consensus        74 ~~g~vLepg-~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI~v~~  152 (367)
                      .+..++.|+ ..++++|...+.+|++.+|.+.||||+++-||++..        ..||+||.|+|.+.+.+.+-++.+.+
T Consensus        46 ~~d~~i~P~~~~~~i~tgi~~~iP~g~~g~I~~RSsl~~kgl~v~~--------GvID~gY~Gei~vl~n~~~~~~~I~~  117 (152)
T 2d4n_A           46 TSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITMKGLQVYP--------GVIDNDYTGEIKIMAKAVNNIVTVSQ  117 (152)
T ss_dssp             SSCEEECGGGCCEEEEEEEECCCCTTEEEEEECCHHHHHTTEEECC--------EEECTTCCSEEEEEEEECSSCEEECT
T ss_pred             CCCCEECCCCEEEEEEECEEEECCCCCEEEEEECCCCEEEEEEEEC--------CEECCCCCCCEEEEEECCCCCEEECC
T ss_conf             8788887898058986074997799968999704652057877660--------45977998867998714899879879


Q ss_pred             CCEEEEEEEEE
Q ss_conf             98035689850
Q gi|254780480|r  153 GSRLSQIRFVK  163 (367)
Q Consensus       153 G~rl~Qi~f~~  163 (367)
                      |+||+||.|..
T Consensus       118 G~RIaQlv~~p  128 (152)
T 2d4n_A          118 GNRIAQLILLP  128 (152)
T ss_dssp             TCEEEEEEEEE
T ss_pred             CCEEEEEEEEE
T ss_conf             99999999875


No 25 
>3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A
Probab=99.25  E-value=2.7e-11  Score=92.11  Aligned_cols=86  Identities=17%  Similarity=0.220  Sum_probs=75.2

Q ss_pred             CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE
Q ss_conf             68864866873299998889984998279986013431-12503423207877554236674438999951686-52798
Q gi|254780480|r   73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV  150 (367)
Q Consensus        73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v  150 (367)
                      .++..++.||+.++++|.-.+.+|.+..+++.||||++ +-++.+...+      ..||+||.|+|.+-+.|.+ .|+.+
T Consensus        64 ~~~~v~i~Pge~~~I~TGi~i~iP~g~~g~I~~RSsla~K~gl~l~n~~------GIIDsdYrGEI~v~l~N~~~~~~~I  137 (178)
T 3mdx_A           64 EDRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTP------GTIDSDYRGEVKVLLINLGDDDFRI  137 (178)
T ss_dssp             TTCCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEETTCS------EEECTTCCSEEEEEEEECSSSCEEE
T ss_pred             CCCCEEECCCCEEEEECCCEEECCCCCEEEEECCCCCCEEEEEEECCCC------CEECCCCCCEEEEEEEECCCCCEEE
T ss_conf             7898798899889986892475599978899727850216079952355------4686777515799999798999798


Q ss_pred             ECCCEEEEEEEEEC
Q ss_conf             33980356898508
Q gi|254780480|r  151 RVGSRLSQIRFVKE  164 (367)
Q Consensus       151 ~~G~rl~Qi~f~~g  164 (367)
                      .+|+||+|++|..-
T Consensus       138 ~~GdRIAQlv~~p~  151 (178)
T 3mdx_A          138 ERGMRIAQAVFAPV  151 (178)
T ss_dssp             CTTCEEEEEEEEEC
T ss_pred             CCCCEEEEEEEEEC
T ss_conf             19998999998323


No 26 
>3ehw_A DUTP pyrophosphatase; jelly-roll, FULL-length C-terminal ARM, enzyme-ligand complex, hydrolase; HET: DUP; 1.80A {Homo sapiens} SCOP: b.85.4.1 PDB: 2hqu_A* 1q5h_A* 1q5u_X
Probab=99.22  E-value=4.8e-11  Score=90.50  Aligned_cols=86  Identities=14%  Similarity=0.129  Sum_probs=74.1

Q ss_pred             EECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCC-CCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCE
Q ss_conf             736886486687329999888998499827998601343112-503423207877554236674438999951686-527
Q gi|254780480|r   71 IDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRI-DVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPI  148 (367)
Q Consensus        71 idl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRL-gif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI  148 (367)
                      +-..+..+++|++.++++|-..+.+|.+..+++.||||++.- ++.+.  +      ..||+||.|+|.+-+.|.+ -++
T Consensus        50 l~~~ed~~I~p~~~~~I~Tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~--~------GvID~dYrGei~v~l~N~~~~~~  121 (164)
T 3ehw_A           50 LYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVG--A------GVIDEDYRGNVGVVLFNFGKEKF  121 (164)
T ss_dssp             EECSSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEE--C------CEECTTBCSCCEEEEEECSSSCE
T ss_pred             EEECCCEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCEEECC--C------EEECCCCCCEEEEEEEECCCCCC
T ss_conf             981788899999879997897998589988999712567522309857--6------47887879738999996767765


Q ss_pred             EEECCCEEEEEEEEEC
Q ss_conf             9833980356898508
Q gi|254780480|r  149 VVRVGSRLSQIRFVKE  164 (367)
Q Consensus       149 ~v~~G~rl~Qi~f~~g  164 (367)
                      .+++|+||+||.|..-
T Consensus       122 ~i~~G~RIaQlv~~~~  137 (164)
T 3ehw_A          122 EVKKGDRIAQLICERI  137 (164)
T ss_dssp             EECTTCEEEEEEEEEB
T ss_pred             EEECCCEEEEEEECCC
T ss_conf             8604999999998355


No 27 
>2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A
Probab=99.20  E-value=1.3e-10  Score=87.63  Aligned_cols=84  Identities=19%  Similarity=0.289  Sum_probs=74.1

Q ss_pred             CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE
Q ss_conf             688648668732999988899849982799860134311-2503423207877554236674438999951686-52798
Q gi|254780480|r   73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV  150 (367)
Q Consensus        73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v  150 (367)
                      ..+..++.|++..+++|...+.+|++..+++.+|||++. .+|.+..        ..||+||.|+|.+-+.|.+ -|+.+
T Consensus        58 a~~d~~I~p~~~~~I~TGi~i~ip~g~~~~i~~RSsl~~k~gL~~~~--------GvID~dYrGeI~v~l~N~~~~~~~I  129 (169)
T 2p9o_A           58 SAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGA--------GVIDADYRGPVGVILFNHSDADFEV  129 (169)
T ss_dssp             CSSCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEEEC--------CEEETTCCSCEEEEEEECSSSCEEE
T ss_pred             ECCCEEECCCCEEEEECCEEEECCCCEEEEEECCCCCCCCCCEEEEC--------CEECCCCCEEEEEEEEECCCCCEEC
T ss_conf             05682999997699978959974888399994566675203517403--------1671467438899999899998785


Q ss_pred             ECCCEEEEEEEEEC
Q ss_conf             33980356898508
Q gi|254780480|r  151 RVGSRLSQIRFVKE  164 (367)
Q Consensus       151 ~~G~rl~Qi~f~~g  164 (367)
                      .+|+||+||.|.+-
T Consensus       130 ~~G~RIaQlv~~~~  143 (169)
T 2p9o_A          130 KFGDRIAQLIIEKI  143 (169)
T ss_dssp             CTTCEEEEEEEEEE
T ss_pred             CCCCEEEEEEECCC
T ss_conf             69997999998050


No 28 
>2xcd_A Probable deoxyuridine 5'-triphosphate nucleotidoh YNCF; hydrolase; 1.84A {Bacillus subtilis} PDB: 2xce_A* 2baz_A
Probab=99.19  E-value=2.5e-11  Score=92.34  Aligned_cols=85  Identities=21%  Similarity=0.291  Sum_probs=72.2

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC-CCC-CCEEE
Q ss_conf             8864866873299998889984998279986013431-12503423207877554236674438999951-686-52798
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEIL-PRT-FPIVV  150 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~-~~s-fpI~v  150 (367)
                      .+..+++||+..+++|-..+.+|++.+|.+.||||++ +.|+.+.-.+      ..||+||+|+|.+-+. |.+ -|+.+
T Consensus        31 ~ed~~I~pge~~~I~tGi~i~iP~g~~~~i~~RSsl~~K~gl~~~n~~------GvID~dYrGei~v~l~~n~~~~~~~I  104 (144)
T 2xcd_A           31 AEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSM------GVIDESYKGDNDFWFFPAYALRDTEI  104 (144)
T ss_dssp             SSCEEECTTCEEEEEEEEEEECCTTEEEEEEECTTHHHHHCEEETTSS------EEEETTCCSTTCEEEEEEEESSCEEE
T ss_pred             CCCEEECCCCEEEEECCEEEECCCCCEEEEECCCHHHHHCCCCCCCCC------CEECCCCCCCCEEEEEECCCCCCEEE
T ss_conf             889699999989997898998699979999724767742685266866------16717878874899876158988696


Q ss_pred             ECCCEEEEEEEEEC
Q ss_conf             33980356898508
Q gi|254780480|r  151 RVGSRLSQIRFVKE  164 (367)
Q Consensus       151 ~~G~rl~Qi~f~~g  164 (367)
                      .+|+||+||.|...
T Consensus       105 ~~G~RIaQlv~~~~  118 (144)
T 2xcd_A          105 KKGDRICQFRIMKK  118 (144)
T ss_dssp             CTTCEEEEEEEEEC
T ss_pred             CCCCEEEEEEEECC
T ss_conf             39997989998235


No 29 
>3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans}
Probab=99.18  E-value=6.8e-11  Score=89.51  Aligned_cols=84  Identities=21%  Similarity=0.261  Sum_probs=71.9

Q ss_pred             CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCC------CEEEEEEECCCC-
Q ss_conf             88648668732999988899849982799860134311-2503423207877554236674------438999951686-
Q gi|254780480|r   74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNY------SGPLYLEILPRT-  145 (367)
Q Consensus        74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy------~G~l~lEI~~~s-  145 (367)
                      .+..+++|++..+++|.+.+.+|++.+|.+.||||+++ -++.+...+      ..||+||      .|+|.+.+.|.+ 
T Consensus        35 ~~~~~I~pg~~~~i~tg~~i~ip~g~~~~i~~RSsl~~K~gl~v~n~~------GvIDsdY~~~~~~rGei~v~l~N~~~  108 (148)
T 3h6x_A           35 AERTEISAGAIVLVPTGVKAYMQVGEVLYLFDRSSNPRKKGLVLINSV------GVIDGDYYNNPNNEGHIFAQMKNMTD  108 (148)
T ss_dssp             SSCEEECTTCEEEEECCEEEECCTTEEEEEEECTHHHHHHSEEETTSE------EEECTTTTTCTTTTTCCEEEEEECSS
T ss_pred             CCCEEECCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCC------CCCCCCCCCCCCCCEEEEEEEEECCC
T ss_conf             889598999889997886203787317999825625532400254756------67967843688877799999997799


Q ss_pred             CCEEEECCCEEEEEEEEE
Q ss_conf             527983398035689850
Q gi|254780480|r  146 FPIVVRVGSRLSQIRFVK  163 (367)
Q Consensus       146 fpI~v~~G~rl~Qi~f~~  163 (367)
                      -|+.+.+|+||+||.|..
T Consensus       109 ~~~~i~~G~RIaQlv~~p  126 (148)
T 3h6x_A          109 QTVVLEAGERVVQGVFMP  126 (148)
T ss_dssp             SCEEECTTCEEEEEEEEE
T ss_pred             CCEEECCCCEEEEEEEEE
T ss_conf             887975999798899865


No 30 
>1vyq_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; drug design, dutpase, deoxyuridine nucleotidohydrolase, malaria; HET: DUX; 2.4A {Plasmodium falciparum} SCOP: b.85.4.1
Probab=99.15  E-value=3.7e-11  Score=91.26  Aligned_cols=119  Identities=13%  Similarity=0.086  Sum_probs=90.7

Q ss_pred             CCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC
Q ss_conf             71225887589899981231578886211000240478873688648668732999988899849982799860134311
Q gi|254780480|r   32 QPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR  111 (367)
Q Consensus        32 QPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR  111 (367)
                      +-|++||..-.... +    .|+....+.  + .+....+.+..+++.++...+...+.+....|.++.+++.||||+++
T Consensus        25 gdAG~DL~~~ed~v-I----~p~~~~~i~--t-gi~~i~i~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~pRSsl~k   96 (173)
T 1vyq_A           25 GDSGLDLFIVKDEV-L----KPKSTTFVK--L-GIKAIALQYKSNYYYKCEKSENKKKDDDKSNIVNTSFLLFPRSSISK   96 (173)
T ss_dssp             -CCEEEECCCSCEE-E----CTTEEEEEE--E-EEEEEEEECCCCC------------------CEECCEEEEECGGGGG
T ss_pred             CEEEEEEECCCCEE-E----CCCCEEEEE--C-CCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHC
T ss_conf             90859997186859-8----999899996--9-98748974375279986504454444333356771489976783540


Q ss_pred             CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEEEC
Q ss_conf             2503423207877554236674438999951686-5279833980356898508
Q gi|254780480|r  112 IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFVKE  164 (367)
Q Consensus       112 Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~~g  164 (367)
                      -+|.....+      ..||+||.|+|.+.+.|.+ .|+.+.+|+|||||.|..-
T Consensus        97 ~gl~l~ns~------GiIDsgYrGei~v~l~N~~~~~~~I~~GdRIaQlv~~~~  144 (173)
T 1vyq_A           97 TPLRLANSI------GLIDAGYRGEIIAALDNTSDQEYHIKKNDKLVQLVSFTG  144 (173)
T ss_dssp             TTEEETTSS------EEECTTCCSEEEEEEEECSSSCEEECTTCCCEEEECTTC
T ss_pred             CCEEECCCC------CEECCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEEEC
T ss_conf             866504621------154689984799999958999779679996999998254


No 31 
>1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A
Probab=99.15  E-value=2.3e-10  Score=86.10  Aligned_cols=96  Identities=17%  Similarity=0.242  Sum_probs=74.4

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEE--EECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEEC--CCCCEEEEC
Q ss_conf             39988997899986334442834016445--30433342134216045688665434566750478861--788889947
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMI--PYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVR--SSVPFVLEH  324 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~--~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr--~~~p~~l~~  324 (367)
                      .++|+|+++++..|.+++.+|+++++...  ++.++-|. .+| +|.+||||.|.+.        +++.  ++.|+.++.
T Consensus        26 d~~i~pg~~~~i~tg~~i~iP~~~~~~i~~RSsl~k~gl-~v~-~gvID~gy~G~l~--------v~l~N~~~~~~~i~~   95 (134)
T 1dun_A           26 DIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGL-LIN-GGIIDEGYTGEIQ--------VICTNIGKSNIKLIE   95 (134)
T ss_dssp             CEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTE-EEE-CCEEETTCCSCCE--------EEEEECSSSCEEECT
T ss_pred             CEEECCCCEEEEECCCEEECCCCEEEEEECCCHHCCCCC-CCC-CEEECCCCCCEEE--------EEEEECCCCCEEECC
T ss_conf             989999998999887399768627999986663202783-124-3387688864699--------999989998779848


Q ss_pred             CCEEEEEEEEECCCCCCCCCCC----CCCCCCCC
Q ss_conf             9888999997637664222375----43472326
Q gi|254780480|r  325 GQIIGRLKYESMDGEPERLYGE----ARGSHYQS  354 (367)
Q Consensus       325 g~~i~~l~~~~~~~~p~~~Yg~----~~~s~Yq~  354 (367)
                      |++||||+|+++..+....|.+    .+|+++.|
T Consensus        96 G~rIaQlv~~~~~~~~~~~~~~~~~t~RG~~gFG  129 (134)
T 1dun_A           96 GQKFAQLIILQHHSNSRQPWDENKISQRGDKGFG  129 (134)
T ss_dssp             TCEEEEEEEEECCCCCCCCCCTTCC---------
T ss_pred             CCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCC
T ss_conf             9969999997868666999155881616799797


No 32 
>1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A
Probab=98.94  E-value=5.3e-09  Score=77.18  Aligned_cols=84  Identities=19%  Similarity=0.188  Sum_probs=66.5

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCC
Q ss_conf             3998899789998633444283401644--53043334213421604568866543456675047886178888994798
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQ  326 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~  326 (367)
                      .++|+|++.++..|.+++.+|+++++..  |++..+-| ..++ +|.+||||.|.+..      .|-+.++.|+.++.|+
T Consensus        25 ~~~i~P~~~~~i~Tg~~i~~p~~~~~~i~~RSsl~~~g-l~v~-~GvID~gY~Gei~v------~l~N~~~~~~~i~~G~   96 (136)
T 1f7d_A           25 EIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKG-LDVL-GGVIDEGYRGEIGV------IMINVSRKSITLMERQ   96 (136)
T ss_dssp             CEEECTTCEEEEECCCEECCCTTEEEEEECCHHHHTTT-EEEE-CCEECTTCCSCCEE------EEEECSSSCEEECTTC
T ss_pred             CEEECCCCEEEEECCEEEECCCCCEEEEECCCCHHCEE-EEEE-EEEECCCCCCEEEE------EEEECCCCCEEECCCC
T ss_conf             88999998999978979985977599998267231204-7865-55788877766899------9999999988837999


Q ss_pred             EEEEEEEEECCCCC
Q ss_conf             88999997637664
Q gi|254780480|r  327 IIGRLKYESMDGEP  340 (367)
Q Consensus       327 ~i~~l~~~~~~~~p  340 (367)
                      +||||+|.+.....
T Consensus        97 riaQlv~~~~~~~~  110 (136)
T 1f7d_A           97 KIAQLIILPCKHEV  110 (136)
T ss_dssp             EEEEEEEEECCCCC
T ss_pred             EEEEEEEECCCEEE
T ss_conf             89999995157157


No 33 
>2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A*
Probab=98.94  E-value=7.5e-09  Score=76.20  Aligned_cols=123  Identities=10%  Similarity=0.079  Sum_probs=88.4

Q ss_pred             CCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHH----HHCCCCEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCEE
Q ss_conf             98656571225887589899981231578886211----00024047887368864866873299998889984998279
Q gi|254780480|r   26 LEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVS----DKIKHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISA  101 (367)
Q Consensus        26 ~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~----~~l~~~~~~eidl~~g~vLepg~~yLv~t~E~i~LP~di~a  101 (367)
                      -..-.|+|..+-++|--.  .+   +.|.......    .+-++-.-..+-..+..+++|++..+++|.-.+.+|.+.+|
T Consensus        92 ~~~~~i~~G~l~~~l~~~--~~---~~P~~~~~~~~l~~P~~~~DAG~Dl~~~~d~~i~P~~~~~i~tgi~~~~p~~~~~  166 (278)
T 2bsy_A           92 RYNSTLRPSELKIHLAAF--RY---ATPQMEEDKGPINHPQYPGDVGLDVSLPKDLALFPHQTVSVTLTVPPPSIPHHRP  166 (278)
T ss_dssp             SSCEEECTTSCEEEEEEE--EE---ECCCC----CCBCCCSSTTCCCEEEECSSCEEECTTCEEEEEECSCCCCCTTEEE
T ss_pred             CCCEEECCCCEEEEEEEE--EE---CCCCEECCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEECCEEEECCCCEEE
T ss_conf             987788698589999888--72---1671314756478998887621679958868999998899974869967998399


Q ss_pred             EEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEEEC
Q ss_conf             98601343112503423207877554236674438999951686-5279833980356898508
Q gi|254780480|r  102 YANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFVKE  164 (367)
Q Consensus       102 ~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~~g  164 (367)
                      .+.||||++..|+.+..           ..||.|+|.+.+.|.+ -|+.+.+|+||+|+.|...
T Consensus       167 ~I~~RSsla~kGl~v~~-----------~~~y~Gei~v~l~N~~~~~~~I~~G~RIAQlvf~~~  219 (278)
T 2bsy_A          167 TIFGRSGLAMQGILVKP-----------CRWRRGGVDVSLTNFSDQTVFLNKYRRFCQLVYLHK  219 (278)
T ss_dssp             EEECCHHHHHTTEEECC-----------EECBTTBEEEEEEECSSSCEEECTTCEEEEEEEEEG
T ss_pred             EEEECCCCCCCCEEEEC-----------CCEECCEEEEEEEECCCCCEEECCCCEEEEEEEEEC
T ss_conf             99856502448989959-----------940355699999989898789789997999999513


No 34 
>3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphatase, DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A
Probab=98.89  E-value=7e-08  Score=69.86  Aligned_cols=116  Identities=14%  Similarity=0.187  Sum_probs=85.7

Q ss_pred             EEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEE
Q ss_conf             67888145545666630455126775130156555587786643113557775399889978999863344428340164
Q gi|254780480|r  196 ALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAE  275 (367)
Q Consensus       196 ~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae  275 (367)
                      .+-|.+..    .+..+=.||...+.=.|+--.                   ..++|+|++..+..|-+++.+|+++.+.
T Consensus        28 ~lkv~~~~----~~A~lP~r~t~~dAG~DL~a~-------------------ed~vI~p~~~~~I~TGi~i~iP~g~~~~   84 (167)
T 3f4f_A           28 VLKIQLRS----ASATVPTKGSATAAGYDIYAS-------------------QDITIPAMGQGMVSTDISFTVPVGTYGR   84 (167)
T ss_dssp             EEEEEECS----TTCCCCEECSTTCSEEEEECS-------------------SCEEECTTEEEEEECCEEEECCTTEEEE
T ss_pred             EEEEEECC----CCCCCCCCCCCCCEEEEEEEC-------------------CCEEECCCCEEEEECCEEEECCCCCEEE
T ss_conf             58999989----998888579998392786818-------------------7889999988999789099879997899


Q ss_pred             EEEECCCC-CCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEEEEECCCCC
Q ss_conf             45304333-421342160456886654345667504788617888899479888999997637664
Q gi|254780480|r  276 MIPYDHSI-GEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEP  340 (367)
Q Consensus       276 ~~~~~~~~-g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i~~l~~~~~~~~p  340 (367)
                      ..+.+... ..+....+|.+|+||.|.+.      ..|...++.|+.|+.|++||||++.++...+
T Consensus        85 i~~RSsl~~k~gl~~~~GvID~gYrGei~------v~l~N~~~~~~~i~~GdRIaQlv~~~~~~~~  144 (167)
T 3f4f_A           85 IAPRSGLAVKNGIQTGAGVVDRDYTGEVK------VVLFNHSQRDFAIKKGDRVAQLILEKIVDDA  144 (167)
T ss_dssp             EECCHHHHHHHCEEEESCEECTTCCSCCE------EEEEECSSSCEEECTTCEEEEEEEEEBCCSC
T ss_pred             EECCCCCCCCCCEEECCCEECCCCCEEEE------EEEEECCCCCEEEECCCEEEEEEEEECCCCC
T ss_conf             96566653214578154317578830699------9999569944799689929999983034774


No 35 
>3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae}
Probab=98.87  E-value=1.8e-08  Score=73.69  Aligned_cols=87  Identities=14%  Similarity=0.157  Sum_probs=70.7

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC-CCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             39988997899986334442834016445304333-42134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI-GEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~-g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      .++|.|++..+..|-.++.+|+++.+...|.+... ..+....+|.+|+||.|.+.      ..|.+.++.||.++.|++
T Consensus        38 d~~i~p~~~~~I~tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~r  111 (147)
T 3p48_A           38 DITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTGAGVVDRDYTGEVK------VVLFNHSQRDFAIKKGDR  111 (147)
T ss_dssp             CEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSCCE------EEEEECSSSCEEECTTCE
T ss_pred             CEEECCCCEEEEECCCEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEE------EEEEECCCCCEEEECCCE
T ss_conf             97999997699977841007875168897356532010110576629978875259------999967992179948997


Q ss_pred             EEEEEEEECCCCCC
Q ss_conf             89999976376642
Q gi|254780480|r  328 IGRLKYESMDGEPE  341 (367)
Q Consensus       328 i~~l~~~~~~~~p~  341 (367)
                      ||||+++++..+++
T Consensus       112 IaQlv~~~~~~~~~  125 (147)
T 3p48_A          112 VAQLILEKIVDDAQ  125 (147)
T ss_dssp             EEEEEEEEBCCSCE
T ss_pred             EEEEEEECCCCCCE
T ss_conf             99999821437742


No 36 
>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A*
Probab=98.86  E-value=1.4e-08  Score=74.50  Aligned_cols=85  Identities=20%  Similarity=0.354  Sum_probs=71.2

Q ss_pred             CCEEECCCCEEEEEEEEEEECC-CCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE
Q ss_conf             8648668732999988899849-98279986013431-12503423207877554236674438999951686-527983
Q gi|254780480|r   75 GGTVLDANCVYIVPLMESLNLK-NGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR  151 (367)
Q Consensus        75 ~g~vLepg~~yLv~t~E~i~LP-~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~  151 (367)
                      +...+.|++..+++|-=.+.+| .+..+.+.||||++ +.++.....+      ..||+||.|+|.+-+.|.+ -++.+.
T Consensus        39 ~~i~~~~~~~~~I~TGi~~~~p~~g~~~~i~~RSs~~~K~~l~~~n~~------GiID~dYrGei~v~l~N~~~~~~~I~  112 (152)
T 1euw_A           39 DAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLV------GLIDSDYQGQLMISVWNRGQDSFTIQ  112 (152)
T ss_dssp             SCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHCEEETTSS------EEECTTCCSEEEEEEEECSSSCEEEC
T ss_pred             CEEEECCCCEEEECCCEEEEECCCCCEEEEECCCCCCEECCEEECCCC------CCCCCCCCCCCEEEEEECCCCCEEEE
T ss_conf             879869998699527638861689707999756774413346503545------65577778852899997899878982


Q ss_pred             CCCEEEEEEEEECC
Q ss_conf             39803568985088
Q gi|254780480|r  152 VGSRLSQIRFVKER  165 (367)
Q Consensus       152 ~G~rl~Qi~f~~g~  165 (367)
                      +|+||+|+.|..-.
T Consensus       113 ~GdRIAQlvi~~~~  126 (152)
T 1euw_A          113 PGERIAQMIFVPVV  126 (152)
T ss_dssp             TTCEEEEEEEEECC
T ss_pred             CCCEEEEEEEEECC
T ss_conf             89979999951048


No 37 
>3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica}
Probab=98.84  E-value=3.3e-08  Score=72.01  Aligned_cols=84  Identities=21%  Similarity=0.248  Sum_probs=70.5

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC-CCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             39988997899986334442834016445304333-42134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI-GEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~-g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      .++|+|++..+..|..++.+|+++.+.+.+.++.. ..+....+|.+||||.|.+.      ..|-+.++.|+.++.|++
T Consensus        55 d~vI~P~~~~lI~TGi~i~iP~g~~~~i~~RSs~~~k~gl~~~~GvID~gYrGel~------v~l~N~~~~~~~I~~G~R  128 (163)
T 3lqw_A           55 NFIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLALKYGIDVGAGVIDEDYRGEIK------VILFNHSNEIFNGRKGDR  128 (163)
T ss_dssp             CEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSEEE------EEEEECSSSCEEECTTCE
T ss_pred             CEEECCCCEEEEECCCEEECCCCCEEEEEECCCCCCCCCEEEECCEECCCCCEEEE------EEEEECCCCCEECCCCCE
T ss_conf             98999998899978847865989789997126733014345115439468971999------999989998650458999


Q ss_pred             EEEEEEEECCC
Q ss_conf             89999976376
Q gi|254780480|r  328 IGRLKYESMDG  338 (367)
Q Consensus       328 i~~l~~~~~~~  338 (367)
                      ||||++++...
T Consensus       129 IaQlv~~~~~~  139 (163)
T 3lqw_A          129 IAQLIIERISY  139 (163)
T ss_dssp             EEEEEEEECCC
T ss_pred             EEEEEEEECCC
T ss_conf             99998603173


No 38 
>2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A
Probab=98.82  E-value=3e-08  Score=72.30  Aligned_cols=86  Identities=14%  Similarity=0.176  Sum_probs=68.1

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEE
Q ss_conf             39988997899986334442834016445304333421342160456886654345667504788617888899479888
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQII  328 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i  328 (367)
                      .++|+|++.++..|.+++.+|+++.+...+.++....+..--+|.+||||.|.+.      ..|-+.++.|+.++.|++|
T Consensus        39 d~~i~P~~~~~i~tgi~i~iP~g~~~~i~~RSsl~~kgl~v~~GvID~~YrGei~------v~l~N~~~~~~~i~~G~rI  112 (147)
T 2ol1_A           39 DYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLKGIDIGGGVIDEDYRGNIG------VILINNGKCTFNVNTGDRI  112 (147)
T ss_dssp             CEEECTTEEEEEECCEEECCCTTEEEEEECCHHHHTTTEEEECCEECTTCCSCCE------EEEEECSSSCEEECTTCEE
T ss_pred             CEEECCCCEEEEECCCEEECCCCCCCEEECCCCCEEEEEEECCEEECCCCCCCEE------EEEEECCCCCEEECCCCEE
T ss_conf             7499999989998998868898760117036765157899686669977786689------9999479977780499979


Q ss_pred             EEEEEEECCCCC
Q ss_conf             999997637664
Q gi|254780480|r  329 GRLKYESMDGEP  340 (367)
Q Consensus       329 ~~l~~~~~~~~p  340 (367)
                      |||+|++...+.
T Consensus       113 aQlv~~~~~~~~  124 (147)
T 2ol1_A          113 AQLIYQRIYYPE  124 (147)
T ss_dssp             EEEEEEEEECCC
T ss_pred             EEEEEECCCCEE
T ss_conf             999983366506


No 39 
>3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster}
Probab=98.80  E-value=6.4e-08  Score=70.12  Aligned_cols=84  Identities=21%  Similarity=0.219  Sum_probs=68.3

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             3998899789998633444283401644530433342-134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      .++|+|++..+..|-.++.+|+++.+...+.++..-- +....+|.+|+||.|.+.      ..|.+-++.|+.++.|++
T Consensus        51 d~~i~p~~~~~i~Tgi~v~iP~g~~~~I~~RSsl~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~R  124 (160)
T 3ecy_A           51 DVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVGAGVVDEDYRGNLG------VVLFNHSDVDFEVKHGDR  124 (160)
T ss_dssp             CEEECTTCEEEEECCEEEECCTTCEEEEECC-------CEEEECEEECTTCCSCCE------EEEEECSSSCEEECTTCE
T ss_pred             CEEECCCCEEEEECCCEEECCCCEEEEEECCCCCEEECCEECCCCCCCCCCCCCCC------EEEEECCCCCEECCCCCE
T ss_conf             67999996699978975718999699997354050427700577743624255461------999989998701589998


Q ss_pred             EEEEEEEECCC
Q ss_conf             89999976376
Q gi|254780480|r  328 IGRLKYESMDG  338 (367)
Q Consensus       328 i~~l~~~~~~~  338 (367)
                      ||||++++...
T Consensus       125 IaQlv~~~~~~  135 (160)
T 3ecy_A          125 IAQFICERIFY  135 (160)
T ss_dssp             EEEEEEEEEEC
T ss_pred             EEEEEECCCCC
T ss_conf             99999853485


No 40 
>3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A*
Probab=98.75  E-value=8.4e-08  Score=69.32  Aligned_cols=86  Identities=13%  Similarity=0.149  Sum_probs=69.0

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             3998899789998633444283401644530433342-134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      .++|+|++.++..|-+++.+|+++.+...+.+...-- +...-+|.+||||.|.+..      .|-+.++.|+.++.|++
T Consensus        33 ~~~i~p~~~~~i~tgi~~~ip~g~~g~i~~RSsl~~k~gL~~~~GvID~gYrGei~v------~l~N~~~~~~~i~~G~R  106 (141)
T 3c2t_A           33 DVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDEDYTGEVKV------ILYNTTERDYIIKKGDR  106 (141)
T ss_dssp             CEEECTTCEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSCCEE------EEEECSSSCEEECTTCE
T ss_pred             CCEECCCCEEEEECCCEEECCCEEEEEEEECCCCEEECCEEEECEEECCCCCCEEEE------EEEECCCCCEEECCCCE
T ss_conf             539788715999658434078604668980667822389797453797888828999------99989999777108999


Q ss_pred             EEEEEEEECCCCC
Q ss_conf             8999997637664
Q gi|254780480|r  328 IGRLKYESMDGEP  340 (367)
Q Consensus       328 i~~l~~~~~~~~p  340 (367)
                      ||||++++...+.
T Consensus       107 IaQlv~~~~~~~~  119 (141)
T 3c2t_A          107 IAQLILEQIVTPG  119 (141)
T ss_dssp             EEEEEEEECCCCC
T ss_pred             EEEEEECCCCCEE
T ss_conf             9999963657215


No 41 
>2xcd_A Probable deoxyuridine 5'-triphosphate nucleotidoh YNCF; hydrolase; 1.84A {Bacillus subtilis} PDB: 2xce_A* 2baz_A
Probab=98.75  E-value=7.8e-08  Score=69.55  Aligned_cols=91  Identities=13%  Similarity=0.165  Sum_probs=71.7

Q ss_pred             HHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC---CCEEEE-CCEEECCCCCCCCCCCCCCEEEE
Q ss_conf             64311355777539988997899986334442834016445304333---421342-16045688665434566750478
Q gi|254780480|r  237 WDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI---GEFRVH-YAGFFDPGFGCVLPQEVGAKAVL  312 (367)
Q Consensus       237 we~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~---g~~r~h-~AGf~DpGf~~~~~~~~~~~~vL  312 (367)
                      |-.+++.    ..++|+|++..+..|-.++.+|+++.+.+.|.++..   | .+++ .+|.+|+||.|.+.      .+|
T Consensus        25 g~DL~a~----ed~~I~pge~~~I~tGi~i~iP~g~~~~i~~RSsl~~K~g-l~~~n~~GvID~dYrGei~------v~l   93 (144)
T 2xcd_A           25 WIDLRAA----EDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFG-VIQTNSMGVIDESYKGDND------FWF   93 (144)
T ss_dssp             CEEEECS----SCEEECTTCEEEEEEEEEEECCTTEEEEEEECTTHHHHHC-EEETTSSEEEETTCCSTTC------EEE
T ss_pred             EEEEECC----CCEEECCCCEEEEECCEEEECCCCCEEEEECCCHHHHHCC-CCCCCCCCEECCCCCCCCE------EEE
T ss_conf             1878258----8969999998999789899869997999972476774268-5266866167178788748------998


Q ss_pred             E-ECCCCCEEEECCCEEEEEEEEECCC
Q ss_conf             8-6178888994798889999976376
Q gi|254780480|r  313 E-VRSSVPFVLEHGQIIGRLKYESMDG  338 (367)
Q Consensus       313 e-vr~~~p~~l~~g~~i~~l~~~~~~~  338 (367)
                      - +.++.|+.++.|++||||++.+...
T Consensus        94 ~~n~~~~~~~I~~G~RIaQlv~~~~~~  120 (144)
T 2xcd_A           94 FPAYALRDTEIKKGDRICQFRIMKKMP  120 (144)
T ss_dssp             EEEEESSCEEECTTCEEEEEEEEECCC
T ss_pred             EECCCCCCEEECCCCEEEEEEEECCCC
T ss_conf             761589886963999798999823526


No 42 
>3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A}
Probab=98.73  E-value=1e-07  Score=68.80  Aligned_cols=85  Identities=13%  Similarity=0.164  Sum_probs=68.8

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             3998899789998633444283401644530433342-134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      .++|+|++..+..|-..+.+|+++.+...+.+...-- +..-.+|.+|+||.|.+.      ..|.+.++.|+.++.|+|
T Consensus        49 d~~I~p~~~~~i~Tgi~i~ip~g~~~~I~~RSsl~~k~gl~~~~GvID~gYrGeI~------v~l~N~~~~~~~I~~G~R  122 (165)
T 3ca9_A           49 DVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDEDYTGEVK------VILYNTTERDYIIKKGDR  122 (165)
T ss_dssp             CEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSCCE------EEEEECSSSCEEECTTCE
T ss_pred             HHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEECCEEEECCEECCCCCCEEE------EEEEECCCCCEEEECCCE
T ss_conf             21139996599978961217860788998566563018878623268666772789------999979999866208999


Q ss_pred             EEEEEEEECCCC
Q ss_conf             899999763766
Q gi|254780480|r  328 IGRLKYESMDGE  339 (367)
Q Consensus       328 i~~l~~~~~~~~  339 (367)
                      ||||++.+...+
T Consensus       123 IaQlv~~~~~~~  134 (165)
T 3ca9_A          123 IAQLILEQIVTP  134 (165)
T ss_dssp             EEEEEEEECCCC
T ss_pred             EEEEEECCCCCE
T ss_conf             999997465713


No 43 
>3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans}
Probab=98.72  E-value=1.7e-07  Score=67.39  Aligned_cols=90  Identities=10%  Similarity=0.002  Sum_probs=69.3

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC--CCEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECC
Q ss_conf             39988997899986334442834016445304333--421342-160456886654345667504788617888899479
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI--GEFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHG  325 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~--g~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g  325 (367)
                      ..+|+|++..+..|-+++.+|+++++...|.+...  .-+++. .+|.+|+||.+.....---...|.+.++.|+.++.|
T Consensus        37 ~~~I~pg~~~~i~tg~~i~ip~g~~~~i~~RSsl~~K~gl~v~n~~GvIDsdY~~~~~~rGei~v~l~N~~~~~~~i~~G  116 (148)
T 3h6x_A           37 RTEISAGAIVLVPTGVKAYMQVGEVLYLFDRSSNPRKKGLVLINSVGVIDGDYYNNPNNEGHIFAQMKNMTDQTVVLEAG  116 (148)
T ss_dssp             CEEECTTCEEEEECCEEEECCTTEEEEEEECTHHHHHHSEEETTSEEEECTTTTTCTTTTTCCEEEEEECSSSCEEECTT
T ss_pred             CEEECCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCC
T ss_conf             95989998899978862037873179998256255324002547566796784368887779999999779988797599


Q ss_pred             CEEEEEEEEECCC
Q ss_conf             8889999976376
Q gi|254780480|r  326 QIIGRLKYESMDG  338 (367)
Q Consensus       326 ~~i~~l~~~~~~~  338 (367)
                      +|||||+|.+...
T Consensus       117 ~RIaQlv~~p~~~  129 (148)
T 3h6x_A          117 ERVVQGVFMPFLL  129 (148)
T ss_dssp             CEEEEEEEEECBC
T ss_pred             CEEEEEEEEEEEE
T ss_conf             9798899865788


No 44 
>3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolism; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A*
Probab=98.71  E-value=1.2e-07  Score=68.40  Aligned_cols=86  Identities=19%  Similarity=0.261  Sum_probs=68.0

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCC---CCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC-CCCEEEEC
Q ss_conf             3998899789998633444283401644530433---3421342160456886654345667504788617-88889947
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHS---IGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS-SVPFVLEH  324 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~---~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~-~~p~~l~~  324 (367)
                      ..+|.|++.++..|-..+.+|+++.+...+.+..   .|...+..+|.+|+||.|.+..      .|-.-+ +.|+.++.
T Consensus        54 d~~I~P~~~~~I~TGi~i~ip~g~~g~I~~RSsl~~K~gl~v~ns~GiID~dYrGei~v------~l~N~~~~~~~~I~~  127 (174)
T 3hza_A           54 DVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKV------ALINLDPAAPIVVHR  127 (174)
T ss_dssp             CEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEETTSSEEECTTCCSCCEE------EEEECCSSCCEEECT
T ss_pred             HHEECCCCEEEEECCEEEEECCCCCEEECCCCHHCCEECEEEECCCCEECCCCCCCEEE------EEEECCCCCCEEECC
T ss_conf             31609997599978849971788612141663130250779706675706887774799------999699996689738


Q ss_pred             CCEEEEEEEEECCCCC
Q ss_conf             9888999997637664
Q gi|254780480|r  325 GQIIGRLKYESMDGEP  340 (367)
Q Consensus       325 g~~i~~l~~~~~~~~p  340 (367)
                      |++||||++.+.....
T Consensus       128 G~RIaQlv~~~~~~~~  143 (174)
T 3hza_A          128 GDRIAQLLVQRVELVE  143 (174)
T ss_dssp             TCEEEEEEEEECCCCC
T ss_pred             CCCEEEEEECCCCCCE
T ss_conf             9808999872358633


No 45 
>3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A
Probab=98.67  E-value=2.7e-07  Score=66.05  Aligned_cols=86  Identities=15%  Similarity=0.203  Sum_probs=69.9

Q ss_pred             CCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCC--CEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEE
Q ss_conf             75399889978999863344428340164453043334--21342-1604568866543456675047886178888994
Q gi|254780480|r  247 EGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIG--EFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLE  323 (367)
Q Consensus       247 ~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g--~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~  323 (367)
                      +..++|.|++.++..|--++.+|+++.+.+.+.+...-  -.++. .+|.+|+||.|.+.      ..|.+.++.|+.++
T Consensus        65 ~~~v~i~Pge~~~I~TGi~i~iP~g~~g~I~~RSsla~K~gl~l~n~~GIIDsdYrGEI~------v~l~N~~~~~~~I~  138 (178)
T 3mdx_A           65 DRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTPGTIDSDYRGEVK------VLLINLGDDDFRIE  138 (178)
T ss_dssp             TCCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEETTCSEEECTTCCSEEE------EEEEECSSSCEEEC
T ss_pred             CCCEEECCCCEEEEECCCEEECCCCCEEEEECCCCCCEEEEEEECCCCCEECCCCCCEEE------EEEEECCCCCEEEC
T ss_conf             898798899889986892475599978899727850216079952355468677751579------99997989997981


Q ss_pred             CCCEEEEEEEEECCC
Q ss_conf             798889999976376
Q gi|254780480|r  324 HGQIIGRLKYESMDG  338 (367)
Q Consensus       324 ~g~~i~~l~~~~~~~  338 (367)
                      .|+|||||++.+...
T Consensus       139 ~GdRIAQlv~~p~~~  153 (178)
T 3mdx_A          139 RGMRIAQAVFAPVIQ  153 (178)
T ss_dssp             TTCEEEEEEEEECCC
T ss_pred             CCCEEEEEEEEECCC
T ss_conf             999899999832376


No 46 
>3ehw_A DUTP pyrophosphatase; jelly-roll, FULL-length C-terminal ARM, enzyme-ligand complex, hydrolase; HET: DUP; 1.80A {Homo sapiens} SCOP: b.85.4.1 PDB: 2hqu_A* 1q5h_A* 1q5u_X
Probab=98.66  E-value=2.1e-07  Score=66.77  Aligned_cols=85  Identities=19%  Similarity=0.203  Sum_probs=68.8

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCC-CEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             399889978999863344428340164453043334-2134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIG-EFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g-~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      .++|+|++..+..|-.++.+|.++.+.+.+.+...- .+....+|.+|+||.|.+.      ..|.+-++.|+.++.|++
T Consensus        55 d~~I~p~~~~~I~Tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~R  128 (164)
T 3ehw_A           55 DYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVG------VVLFNFGKEKFEVKKGDR  128 (164)
T ss_dssp             CEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEECCEECTTBCSCCE------EEEEECSSSCEEECTTCE
T ss_pred             CEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCEEECCCEEECCCCCCEEE------EEEEECCCCCCEEECCCE
T ss_conf             88999998799978979985899889997125675223098576478878797389------999967677658604999


Q ss_pred             EEEEEEEECCCC
Q ss_conf             899999763766
Q gi|254780480|r  328 IGRLKYESMDGE  339 (367)
Q Consensus       328 i~~l~~~~~~~~  339 (367)
                      ||||++.+...+
T Consensus       129 IaQlv~~~~~~~  140 (164)
T 3ehw_A          129 IAQLICERIFYP  140 (164)
T ss_dssp             EEEEEEEEBCCC
T ss_pred             EEEEEECCCCCE
T ss_conf             999998355642


No 47 
>2d4n_A DU; jelly roll, hydrolase; HET: UPR; 1.53A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A*
Probab=98.46  E-value=1e-06  Score=62.29  Aligned_cols=85  Identities=13%  Similarity=0.224  Sum_probs=63.3

Q ss_pred             EEEECCC-CEEEEEEEEEEECCCCCEEEEE--EECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECC
Q ss_conf             3998899-7899986334442834016445--304333421342160456886654345667504788617888899479
Q gi|254780480|r  249 QFILDPN-EFYIFASREFIQIPPSLVAEMI--PYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHG  325 (367)
Q Consensus       249 ~~~l~p~-~F~l~~s~E~v~iP~~~aae~~--~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g  325 (367)
                      ..+|.|+ ..++..|...+.+|+++.+...  ++.++-|  ....+|.+|+||.|.+.       +|-..++.|+.++.|
T Consensus        48 d~~i~P~~~~~~i~tgi~~~iP~g~~g~I~~RSsl~~kg--l~v~~GvID~gY~Gei~-------vl~n~~~~~~~I~~G  118 (152)
T 2d4n_A           48 HTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITMKG--LQVYPGVIDNDYTGEIK-------IMAKAVNNIVTVSQG  118 (152)
T ss_dssp             CEEECGGGCCEEEEEEEECCCCTTEEEEEECCHHHHHTT--EEECCEEECTTCCSEEE-------EEEEECSSCEEECTT
T ss_pred             CCEECCCCEEEEEEECEEEECCCCCEEEEEECCCCEEEE--EEEECCEECCCCCCCEE-------EEEECCCCCEEECCC
T ss_conf             888878980589860749977999689997046520578--77660459779988679-------987148998798799


Q ss_pred             CEEEEEEEEECCCCCCC
Q ss_conf             88899999763766422
Q gi|254780480|r  326 QIIGRLKYESMDGEPER  342 (367)
Q Consensus       326 ~~i~~l~~~~~~~~p~~  342 (367)
                      ++||||+|.++.+..+.
T Consensus       119 ~RIaQlv~~p~~~~~~~  135 (152)
T 2d4n_A          119 NRIAQLILLPLIETDNK  135 (152)
T ss_dssp             CEEEEEEEEECCCCCCC
T ss_pred             CEEEEEEEEEEEEECCC
T ss_conf             99999998757897041


No 48 
>2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A
Probab=98.45  E-value=1.7e-06  Score=60.86  Aligned_cols=86  Identities=16%  Similarity=0.132  Sum_probs=68.5

Q ss_pred             EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE
Q ss_conf             3998899789998633444283401644530433342-134216045688665434566750478861788889947988
Q gi|254780480|r  249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI  327 (367)
Q Consensus       249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~  327 (367)
                      ..+|.|++..+..|-.++.+|+++.+.+.+.+...-- .....+|.+|+||.|.+.      ..|.+.++.|+.++.|++
T Consensus        61 d~~I~p~~~~~I~TGi~i~ip~g~~~~i~~RSsl~~k~gL~~~~GvID~dYrGeI~------v~l~N~~~~~~~I~~G~R  134 (169)
T 2p9o_A           61 DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVG------VILFNHSDADFEVKFGDR  134 (169)
T ss_dssp             CEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEEECCEEETTCCSCEE------EEEEECSSSCEEECTTCE
T ss_pred             CEEECCCCEEEEECCEEEECCCCEEEEEECCCCCCCCCCEEEECCEECCCCCEEEE------EEEEECCCCCEECCCCCE
T ss_conf             82999997699978959974888399994566675203517403167146743889------999989999878569997


Q ss_pred             EEEEEEEECCCCC
Q ss_conf             8999997637664
Q gi|254780480|r  328 IGRLKYESMDGEP  340 (367)
Q Consensus       328 i~~l~~~~~~~~p  340 (367)
                      ||||++.+.....
T Consensus       135 IaQlv~~~~~~~~  147 (169)
T 2p9o_A          135 IAQLIIEKIVTPD  147 (169)
T ss_dssp             EEEEEEEEEECCC
T ss_pred             EEEEEECCCCEEE
T ss_conf             9999980502176


No 49 
>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A*
Probab=98.24  E-value=1.3e-05  Score=55.02  Aligned_cols=88  Identities=19%  Similarity=0.273  Sum_probs=69.2

Q ss_pred             CCEEEECCCCEEEEEEEEEEECC-CCCEEEEEEECCCC--CCEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEE
Q ss_conf             75399889978999863344428-34016445304333--421342-160456886654345667504788617888899
Q gi|254780480|r  247 EGQFILDPNEFYIFASREFIQIP-PSLVAEMIPYDHSI--GEFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVL  322 (367)
Q Consensus       247 ~~~~~l~p~~F~l~~s~E~v~iP-~~~aae~~~~~~~~--g~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l  322 (367)
                      ++.+.+.|++..+..|-=.+.+| +++.+...|.++..  +-+... -+|.+|+||.|.+      ...|-+.++.|+.+
T Consensus        38 ~~~i~~~~~~~~~I~TGi~~~~p~~g~~~~i~~RSs~~~K~~l~~~n~~GiID~dYrGei------~v~l~N~~~~~~~I  111 (152)
T 1euw_A           38 NDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQL------MISVWNRGQDSFTI  111 (152)
T ss_dssp             SSCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHCEEETTSSEEECTTCCSEE------EEEEEECSSSCEEE
T ss_pred             CCEEEECCCCEEEECCCEEEEECCCCCEEEEECCCCCCEECCEEECCCCCCCCCCCCCCC------EEEEEECCCCCEEE
T ss_conf             987986999869952763886168970799975677441334650354565577778852------89999789987898


Q ss_pred             ECCCEEEEEEEEECCCCC
Q ss_conf             479888999997637664
Q gi|254780480|r  323 EHGQIIGRLKYESMDGEP  340 (367)
Q Consensus       323 ~~g~~i~~l~~~~~~~~p  340 (367)
                      +.|+|||||++.+.....
T Consensus       112 ~~GdRIAQlvi~~~~~~~  129 (152)
T 1euw_A          112 QPGERIAQMIFVPVVQAE  129 (152)
T ss_dssp             CTTCEEEEEEEEECCCCC
T ss_pred             ECCCEEEEEEEEECCCCE
T ss_conf             289979999951048546


No 50 
>1vyq_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; drug design, dutpase, deoxyuridine nucleotidohydrolase, malaria; HET: DUX; 2.4A {Plasmodium falciparum} SCOP: b.85.4.1
Probab=97.87  E-value=5.9e-05  Score=50.75  Aligned_cols=79  Identities=10%  Similarity=0.013  Sum_probs=52.9

Q ss_pred             ECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEEC-CEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEE
Q ss_conf             8899789998633444283401644--53043334213421-60456886654345667504788617888899479888
Q gi|254780480|r  252 LDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHY-AGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQII  328 (367)
Q Consensus       252 l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~-AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i  328 (367)
                      +.+.......+.+....|.++++-.  ||+...-| .++++ .|.+|+||.|.+.      +.|-..++.|+.++.|+||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~i~pRSsl~k~g-l~l~ns~GiIDsgYrGei~------v~l~N~~~~~~~I~~GdRI  136 (173)
T 1vyq_A           64 YKCEKSENKKKDDDKSNIVNTSFLLFPRSSISKTP-LRLANSIGLIDAGYRGEII------AALDNTSDQEYHIKKNDKL  136 (173)
T ss_dssp             -----------------CEECCEEEEECGGGGGTT-EEETTSSEEECTTCCSEEE------EEEEECSSSCEEECTTCCC
T ss_pred             EEEEECCCCCCCCCCCCCCCCEEEEECCCCHHCCC-EEECCCCCEECCCCCCEEE------EEEEECCCCCEEECCCCEE
T ss_conf             98650445444433335677148997678354086-6504621154689984799------9999589997796799969


Q ss_pred             EEEEEEECC
Q ss_conf             999997637
Q gi|254780480|r  329 GRLKYESMD  337 (367)
Q Consensus       329 ~~l~~~~~~  337 (367)
                      |||++.+..
T Consensus       137 aQlv~~~~~  145 (173)
T 1vyq_A          137 VQLVSFTGE  145 (173)
T ss_dssp             EEEECTTCC
T ss_pred             EEEEEEECC
T ss_conf             999982548


No 51 
>1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A*
Probab=52.23  E-value=9.4  Score=16.78  Aligned_cols=36  Identities=8%  Similarity=0.176  Sum_probs=18.5

Q ss_pred             EECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             947988899999763766422237543472326667
Q gi|254780480|r  322 LEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQAL  357 (367)
Q Consensus       322 l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl  357 (367)
                      ..+|+.||.+.|.+.+...-..+-......|+|||+
T Consensus        17 ~~~g~~vg~i~~~~~~~~~~~i~~~~V~p~~rG~Gi   52 (102)
T 1r57_A           17 DDENNALAEITYRFVDNNEINIDHTGVSDELGGQGV   52 (102)
T ss_dssp             SSSTTEEEEEEEEESSSSEEEEEEEEECCSSSTTCT
T ss_pred             EECCEEEEEEEEEECCCCEEEEEEEEECHHHCCCHH
T ss_conf             989979999999993799999999999979949849


No 52 
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=39.75  E-value=9.1  Score=16.88  Aligned_cols=35  Identities=20%  Similarity=0.336  Sum_probs=23.0

Q ss_pred             CCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEC
Q ss_conf             58778664311355777539988997899986334442
Q gi|254780480|r  231 YDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQI  268 (367)
Q Consensus       231 y~~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~i  268 (367)
                      +.--+||+++..+  .+|.-+|.+||..|+ +++.|.+
T Consensus         6 ~~~m~~w~~~~~T--~sg~P~L~~~E~~l~-~q~~V~L   40 (145)
T 2cay_A            6 HHHMEYWHYVETT--SSGQPLLREGEKDIF-IDQSVGL   40 (145)
T ss_dssp             -CGGGTCEECCBC--TTSCBCCCTTCCEEE-EEEEEEE
T ss_pred             HHHHHHHCCEEEC--CCCCEEECCCEEEEE-EECCEEE
T ss_conf             4567640110122--699778519938999-8278788


No 53 
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=32.71  E-value=7.6  Score=17.38  Aligned_cols=100  Identities=20%  Similarity=0.231  Sum_probs=47.1

Q ss_pred             ECCCCCCCCHHHHHHHHCCCCCCCCEEEE----CCCCEEEEEEEEEEECCCCCEEEEEEECCC---CCCEEEECCEEECC
Q ss_conf             01565555877866431135577753998----899789998633444283401644530433---34213421604568
Q gi|254780480|r  224 DVDSENKYDESDFWDPLFSWDAPEGQFIL----DPNEFYIFASREFIQIPPSLVAEMIPYDHS---IGEFRVHYAGFFDP  296 (367)
Q Consensus       224 Dl~k~~~y~~~dfwe~i~~~~~~~~~~~l----~p~~F~l~~s~E~v~iP~~~aae~~~~~~~---~g~~r~h~AGf~Dp  296 (367)
                      ++.+....+++++-+-....    ...+.    -||-=||.--.+...+|.--.--.+-=.+.   .|.+-.-|.-= -|
T Consensus       118 ~vA~~~gLs~~evI~~H~~~----~y~V~~iGF~PGfpYL~gld~~l~~PR~~~PR~~vPaGSVgIag~qt~IYP~~-sP  192 (228)
T 3mml_B          118 EVASLTGMTPAQVIAAHTGT----PWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQ-SP  192 (228)
T ss_dssp             HHHHHHTSCHHHHHHHHHHS----CEEEEEECSSTTCEEEESSCGGGCBCCCSSCEEEECTTEEEEEBTEEEECSSS-EE
T ss_pred             HHHHHHCCCHHHHHHHHHCC----CEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCC-CC
T ss_conf             99999594978999887477----61899987637631313687234465557864447898289867547998589-99


Q ss_pred             CCCCCCCCCCCCE-EEEEE-CCCCCEEEECCCEEEEEEEEE
Q ss_conf             8665434566750-47886-178888994798889999976
Q gi|254780480|r  297 GFGCVLPQEVGAK-AVLEV-RSSVPFVLEHGQIIGRLKYES  335 (367)
Q Consensus       297 Gf~~~~~~~~~~~-~vLev-r~~~p~~l~~g~~i~~l~~~~  335 (367)
                      | |+++-   |.. ..|-- ..+-|++|.+|.+|   .|++
T Consensus       193 G-GW~iI---GrTp~~lfd~~~~~P~ll~~GD~V---rF~~  226 (228)
T 3mml_B          193 G-GWQLI---GHTDAVMFDVNRDKPALLTPGMWV---QFRA  226 (228)
T ss_dssp             E-CSEEE---EEECSCSBCTTSSSSBSCCTTCEE---EEEE
T ss_pred             C-CCEEE---CCCCCCCCCCCCCCCCCCCCCCEE---EEEE
T ss_conf             7-53486---615711018899997236999989---9997


No 54 
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=32.60  E-value=17  Score=15.09  Aligned_cols=32  Identities=22%  Similarity=0.265  Sum_probs=27.0

Q ss_pred             CCCCCCCHHHHHHHHHCCCEEECCCCCHHHCC
Q ss_conf             98761586899999987984981789865657
Q gi|254780480|r    1 MNKGVLPDKAIATLAERGDIVSEHPLEKNQIQ   32 (367)
Q Consensus         1 ~~~GILsd~~I~~li~~g~I~i~~p~~~~QIQ   32 (367)
                      |.+++||+.+|+..-++|.+++..-+++++|.
T Consensus        18 ~~~~~Lt~eq~~~f~~dGyvvl~n~l~~~~i~   49 (308)
T 2a1x_A           18 LDNNVLTLEQRKFYEENGFLVIKNLVPDADIQ   49 (308)
T ss_dssp             CCC--CCSTHHHHHHHHSEEEETTCSCHHHHH
T ss_pred             CCCCCCCHHHHHHHHHCCEEEECCCCCHHHHH
T ss_conf             47898999999999879899815847999999


No 55 
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain, 2-dimethylmenaquinone methyltransferase; 1.90A {Geobacillus kaustophilus HTA426}
Probab=24.33  E-value=29  Score=13.58  Aligned_cols=28  Identities=14%  Similarity=0.279  Sum_probs=25.1

Q ss_pred             CEEEECCCCEEEEEEEEEEECCCCCEEE
Q ss_conf             5399889978999863344428340164
Q gi|254780480|r  248 GQFILDPNEFYIFASREFIQIPPSLVAE  275 (367)
Q Consensus       248 ~~~~l~p~~F~l~~s~E~v~iP~~~aae  275 (367)
                      +...++||.+.++...=.|-||.++++|
T Consensus       132 gGv~V~pGD~I~aD~dGVvviP~~l~~e  159 (161)
T 2pcn_A          132 GGVRWEPGAYVYADADGVVVANKDLLAK  159 (161)
T ss_dssp             TTEEECTTCEEEEETTEEEEESSCTTSC
T ss_pred             CCEEECCCCEEEEECCEEEEECHHHHCC
T ss_conf             9999889999999799589988799424


No 56 
>1uwf_A FIMH protein, FIMH; bacterial adhesin, carbohydrate recognition, adherence to mammalian cells, IG-variable fold, cell adhesion; HET: DEG; 1.69A {Escherichia coli} SCOP: b.2.3.2 PDB: 2vco_A* 1tr7_B*
Probab=20.88  E-value=34  Score=13.14  Aligned_cols=36  Identities=14%  Similarity=0.267  Sum_probs=22.9

Q ss_pred             CCCCCCEEEEEEECCCCCCEEEECCCEEEEEEEEEC
Q ss_conf             366744389999516865279833980356898508
Q gi|254780480|r  129 ISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFVKE  164 (367)
Q Consensus       129 id~Gy~G~l~lEI~~~sfpI~v~~G~rl~Qi~f~~g  164 (367)
                      ...-|.=+|||-..+-..+|.++.|+.|++|-+++-
T Consensus        99 ~~~p~p~klYLt~~~~aggV~I~~Gd~iatl~~~qt  134 (158)
T 1uwf_A           99 TDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQT  134 (158)
T ss_dssp             SCEECCEEEEEEECTTCCEEEECTTCEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCCCCEEEECCCEEEEEEEEEC
T ss_conf             975202699998658988669855988999999951


Done!