Query gi|254780480|ref|YP_003064893.1| 2'-deoxycytidine 5'-triphosphate deaminase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 367 No_of_seqs 242 out of 475 Neff 5.3 Searched_HMMs 23785 Date Mon May 30 11:56:03 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780480.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2r9q_A AGR_C_764P, 2'-deoxycyt 100.0 0 0 911.7 37.0 360 2-365 9-369 (370) 2 1pkh_A Bifunctional deaminase/ 100.0 2E-38 8.4E-43 269.3 17.9 154 4-166 1-171 (204) 3 2qxx_A DCTP deaminase, deoxycy 100.0 3E-38 1.3E-42 268.1 13.9 154 4-165 1-155 (190) 4 1xs1_A DCTP deaminase, deoxycy 100.0 1.2E-37 5.2E-42 264.1 13.0 155 4-165 1-164 (193) 5 3km3_A DCTP deaminase, deoxycy 100.0 2.6E-35 1.1E-39 248.9 14.7 148 4-165 23-180 (206) 6 2yzj_A 167AA long hypothetical 100.0 3.4E-34 1.4E-38 241.6 14.0 143 3-165 10-152 (169) 7 1xs1_A DCTP deaminase, deoxycy 100.0 1.4E-33 5.9E-38 237.6 15.1 184 166-365 1-193 (193) 8 2qxx_A DCTP deaminase, deoxycy 100.0 1.3E-31 5.6E-36 224.7 14.3 180 166-366 1-186 (190) 9 3km3_A DCTP deaminase, deoxycy 100.0 3.5E-31 1.5E-35 222.0 12.0 175 164-362 21-205 (206) 10 1pkh_A Bifunctional deaminase/ 100.0 2.5E-29 1.1E-33 209.9 12.5 183 166-366 1-200 (204) 11 2yzj_A 167AA long hypothetical 99.9 9.1E-24 3.8E-28 173.6 12.0 161 163-357 8-168 (169) 12 2r9q_A AGR_C_764P, 2'-deoxycyt 99.8 2.1E-20 8.8E-25 151.6 13.2 151 3-164 172-340 (370) 13 1dun_A Deoxyuridine 5'-triphos 99.6 1.5E-15 6.3E-20 119.9 8.1 84 74-165 24-108 (134) 14 2bsy_A Deoxyuridine 5'-triphos 99.6 9.5E-13 4E-17 101.6 19.7 188 74-339 31-222 (278) 15 1f7d_A POL polyprotein; eight 99.5 9.4E-14 3.9E-18 108.2 8.7 85 73-165 22-107 (136) 16 2ol1_A Deoxyuridine 5'-triphos 99.4 3.6E-13 1.5E-17 104.4 9.0 84 74-165 37-121 (147) 17 3lqw_A Deoxyuridine 5'-triphos 99.4 2.4E-12 1E-16 99.0 10.9 87 71-165 50-138 (163) 18 3c2t_A Deoxyuridine triphospha 99.4 3.4E-12 1.4E-16 98.0 9.1 84 74-165 31-116 (141) 19 3ecy_A CG4584-PA, isoform A (b 99.3 1.7E-11 6.9E-16 93.5 10.3 84 74-164 49-133 (160) 20 3ca9_A Deoxyuridine triphospha 99.3 1.2E-11 5.2E-16 94.4 8.9 84 74-165 47-132 (165) 21 3p48_A Deoxyuridine 5'-triphos 99.3 1.3E-11 5.4E-16 94.3 9.0 82 74-163 36-119 (147) 22 3f4f_A Deoxyuridine 5'-triphos 99.3 1.4E-11 5.8E-16 94.0 9.0 83 73-163 55-139 (167) 23 3hza_A Deoxyuridine 5'-triphos 99.3 1.5E-11 6.3E-16 93.8 8.2 87 73-165 51-140 (174) 24 2d4n_A DU; jelly roll, hydrola 99.3 3.3E-11 1.4E-15 91.6 9.8 82 74-163 46-128 (152) 25 3mdx_A Deoxyuridine 5'-triphos 99.3 2.7E-11 1.1E-15 92.1 9.2 86 73-164 64-151 (178) 26 3ehw_A DUTP pyrophosphatase; j 99.2 4.8E-11 2E-15 90.5 9.2 86 71-164 50-137 (164) 27 2p9o_A DUTP pyrophosphatase-li 99.2 1.3E-10 5.6E-15 87.6 10.4 84 73-164 58-143 (169) 28 2xcd_A Probable deoxyuridine 5 99.2 2.5E-11 1.1E-15 92.3 6.5 85 74-164 31-118 (144) 29 3h6x_A Dutpase; jelly-roll bet 99.2 6.8E-11 2.9E-15 89.5 8.2 84 74-163 35-126 (148) 30 1vyq_A Deoxyuridine 5'-triphos 99.2 3.7E-11 1.5E-15 91.3 5.8 119 32-164 25-144 (173) 31 1dun_A Deoxyuridine 5'-triphos 99.1 2.3E-10 9.6E-15 86.1 9.6 96 249-354 26-129 (134) 32 1f7d_A POL polyprotein; eight 98.9 5.3E-09 2.2E-13 77.2 9.6 84 249-340 25-110 (136) 33 2bsy_A Deoxyuridine 5'-triphos 98.9 7.5E-09 3.1E-13 76.2 10.2 123 26-164 92-219 (278) 34 3f4f_A Deoxyuridine 5'-triphos 98.9 7E-08 2.9E-12 69.9 13.7 116 196-340 28-144 (167) 35 3p48_A Deoxyuridine 5'-triphos 98.9 1.8E-08 7.6E-13 73.7 10.3 87 249-341 38-125 (147) 36 1euw_A Dutpase, deoxyuridine 5 98.9 1.4E-08 5.7E-13 74.5 9.3 85 75-165 39-126 (152) 37 3lqw_A Deoxyuridine 5'-triphos 98.8 3.3E-08 1.4E-12 72.0 10.8 84 249-338 55-139 (163) 38 2ol1_A Deoxyuridine 5'-triphos 98.8 3E-08 1.2E-12 72.3 9.9 86 249-340 39-124 (147) 39 3ecy_A CG4584-PA, isoform A (b 98.8 6.4E-08 2.7E-12 70.1 11.2 84 249-338 51-135 (160) 40 3c2t_A Deoxyuridine triphospha 98.8 8.4E-08 3.5E-12 69.3 10.5 86 249-340 33-119 (141) 41 2xcd_A Probable deoxyuridine 5 98.7 7.8E-08 3.3E-12 69.6 10.2 91 237-338 25-120 (144) 42 3ca9_A Deoxyuridine triphospha 98.7 1E-07 4.3E-12 68.8 10.4 85 249-339 49-134 (165) 43 3h6x_A Dutpase; jelly-roll bet 98.7 1.7E-07 7E-12 67.4 11.2 90 249-338 37-129 (148) 44 3hza_A Deoxyuridine 5'-triphos 98.7 1.2E-07 4.9E-12 68.4 10.2 86 249-340 54-143 (174) 45 3mdx_A Deoxyuridine 5'-triphos 98.7 2.7E-07 1.1E-11 66.1 11.1 86 247-338 65-153 (178) 46 3ehw_A DUTP pyrophosphatase; j 98.7 2.1E-07 8.7E-12 66.8 10.2 85 249-339 55-140 (164) 47 2d4n_A DU; jelly roll, hydrola 98.5 1E-06 4.2E-11 62.3 9.2 85 249-342 48-135 (152) 48 2p9o_A DUTP pyrophosphatase-li 98.5 1.7E-06 7E-11 60.9 10.2 86 249-340 61-147 (169) 49 1euw_A Dutpase, deoxyuridine 5 98.2 1.3E-05 5.5E-10 55.0 10.7 88 247-340 38-129 (152) 50 1vyq_A Deoxyuridine 5'-triphos 97.9 5.9E-05 2.5E-09 50.8 8.2 79 252-337 64-145 (173) 51 1r57_A Conserved hypothetical 52.2 9.4 0.0004 16.8 3.0 36 322-357 17-52 (102) 52 2cay_A VPS36 PH domain, vacuol 39.8 9.1 0.00038 16.9 1.3 35 231-268 6-40 (145) 53 3mml_B Allophanate hydrolase s 32.7 7.6 0.00032 17.4 0.0 100 224-335 118-226 (228) 54 2a1x_A Phytanoyl-COA dioxygena 32.6 17 0.00072 15.1 1.8 32 1-32 18-49 (308) 55 2pcn_A S-adenosylmethionine:2- 24.3 29 0.0012 13.6 2.4 28 248-275 132-159 (161) 56 1uwf_A FIMH protein, FIMH; bac 20.9 34 0.0014 13.1 4.6 36 129-164 99-134 (158) No 1 >2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Probab=100.00 E-value=0 Score=911.75 Aligned_cols=360 Identities=58% Similarity=0.953 Sum_probs=351.8 Q ss_pred CCCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECC Q ss_conf 87615868999999879849817898656571225887589899981231578886211000240478873688648668 Q gi|254780480|r 2 NKGVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDA 81 (367) Q Consensus 2 ~~GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLep 81 (367) ++|||||++|++++++|.|.+++|++++||||||+|||||++|||+++||+|+.+.+|.++++++.+++++++++|+|+| T Consensus 9 ~~GILsd~~I~~li~~g~I~i~p~~~~~QIqPaSvDLrLG~~~~~~~~s~lp~~~~~v~d~~~~~~~~~i~~~~~~vL~P 88 (370) T 2r9q_A 9 TTGILADGAIRALFAGDKLKSEADLDVDQVQPASLDLRLGSKAYRVRASFMPGPGTRVIDKLNRFSLHEVDLSQGAVLET 88 (370) T ss_dssp CSEECCHHHHHHHHHHTSEEESSCCCTTCBCSSCEEEEBCSEEEEESSBCCCCTTCCHHHHHHHC-CEEEECSSCEEECT T ss_pred CCEECCHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEECC T ss_conf 68878699999998779917079999777788569832387899996544778997401112254159995799809758 Q ss_pred CCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEE Q ss_conf 73299998889984998279986013431125034232078775542366744389999516865279833980356898 Q gi|254780480|r 82 NCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRF 161 (367) Q Consensus 82 g~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI~v~~G~rl~Qi~f 161 (367) ||+||++|+|+|+||+|++|+++||||+||||||||+++|++.+|++|||||+|+|||||+|+||||+|||||||||||| T Consensus 89 g~~yL~~t~E~i~LP~di~a~~~~KSS~gRlgl~~~~~~~~~~~~~~i~~Gy~G~ltLEI~n~s~pI~l~~G~ri~Ql~F 168 (370) T 2r9q_A 89 GCVYIVPLMESLALPADMSASANPKSSTGRLDIFTRVMTDNAQEFDKIPAGYTGPLYLEISPRTFPIVVRRGSRLSQIRF 168 (370) T ss_dssp TCEEEEEEEEEEECCTTEEEEEEECHHHHTTTEEEEEEETTCSSTTEECTTCEEEEEEEEEESSSCEEECTTCEEEEEEE T ss_pred CCEEEEEEEEEEECCCCCEEEEECCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEE T ss_conf 97899998779966998589998213132153787430357755664576421149999945875779968975788997 Q ss_pred EECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHC Q ss_conf 50887689999999875278603665544337316788814554566663045512677513015655558778664311 Q gi|254780480|r 162 VKERKFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLF 241 (367) Q Consensus 162 ~~g~~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~ 241 (367) ++|++++||++|+++|++++||+++.+..+++|+++||||+++ ..+++|||||||||++||++|+++|++++|||||+ T Consensus 169 ~~g~~~lsd~~l~~lh~~~~lv~~~~~~~~~~gl~lsVdL~~~--~~~~iigyrAk~h~~~Id~~k~~~y~~~~fwe~i~ 246 (370) T 2r9q_A 169 RIGHALLNESEVLKLHETETLVASENPNVTGGGIALSIDLKGF--GENGLIGYRGKHHTAVVDVDKKAQHDVLDFWEPLF 246 (370) T ss_dssp EESCCBCCHHHHHHHHHHSCSBC---CCCCC--EEEEBCCSCC--TTTTEEEEEECSSCCCEETTCGGGSCGGGTEEEEE T ss_pred ECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC--CCCCCEEEECCCCCCCEEECCCCCCCHHHHHHEEE T ss_conf 3377666889999877408732477544147882589983356--77871799614678836605655246878431021 Q ss_pred CCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC-CCCE Q ss_conf 355777539988997899986334442834016445304333421342160456886654345667504788617-8888 Q gi|254780480|r 242 SWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS-SVPF 320 (367) Q Consensus 242 ~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~-~~p~ 320 (367) .. +++.|+|+||||||++|+|+|+||+|+||||+++++.+|+||+||||||||||+|+.+++.|+++|||||+ ++|| T Consensus 247 ~~--~~~~~iL~P~ef~l~~T~E~v~iP~~~aa~~~~rs~~~r~g~~~~agf~DpGf~g~~~~~~g~~~vLev~~~~~p~ 324 (370) T 2r9q_A 247 AR--GRAELILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVHYAGFFDPGFGHAQAGGTGSRAVLEVRSHEVPF 324 (370) T ss_dssp CC--SSSEEEECTTCCEEEEEEEEECCCTTEEEEEEECGGGTTTEEEESCCEECTTTTC-----CCEEEEEEEEECSSCE T ss_pred CC--CCCEEEEECCCEEEEEEEEEEEECCCEEEEEEEECHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE T ss_conf 27--8977999679799999999999789739999704343258267647517699876445566855999992698886 Q ss_pred EEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 994798889999976376642223754347232666773443430 Q gi|254780480|r 321 VLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQALKLSKHFHQ 365 (367) Q Consensus 321 ~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl~lsk~f~~ 365 (367) +|++||+||||+||+|+++|+++||++++||||+||||||||||+ T Consensus 325 ~l~~G~~I~qlvfe~l~~~p~~~Yg~~~~s~Yq~Qg~~lsK~fk~ 369 (370) T 2r9q_A 325 ILEHGQIVGRLVYEHMLEKPEGLYGTGLGSNYQAQGLKLSKHFRA 369 (370) T ss_dssp EEETTCEEEEEEEEEBSSCCC------------------------ T ss_pred EEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCC T ss_conf 983899999999999878765556887787144888881220357 No 2 >1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A* Probab=100.00 E-value=2e-38 Score=269.27 Aligned_cols=154 Identities=23% Similarity=0.286 Sum_probs=127.3 Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEE------------ Q ss_conf 61586899999987984981789865657122588758989998123157888621100024047887------------ Q gi|254780480|r 4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREI------------ 71 (367) Q Consensus 4 GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~ei------------ 71 (367) |||||++|++++++|.|.++ ||+++||||||+|||||+++++++.+.++.......+++.......+ T Consensus 1 MILsd~~I~~~i~~g~i~I~-Pf~~~~i~p~s~DlrLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (204) T 1pkh_A 1 MILSDKDIIDYVTSKRIIIK-PFNKDFVGPCSYDVTLGDEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNLTEEKI 79 (204) T ss_dssp CBCCHHHHHHHHHTTSSEEE-SCCGGGBCSSCEEEEBCSEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCCCHHHH T ss_pred CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 92788999999876986784-78967648744888726879996051136544565210135642101555433343220 Q ss_pred -----ECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC Q ss_conf -----368864866873299998889984998279986013431125034232078775542366744389999516865 Q gi|254780480|r 72 -----DLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTF 146 (367) Q Consensus 72 -----dl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sf 146 (367) +.+..|+++|+ ||++|+|+|+||+|++|+++||||+||+|+++|.+++ +|||||+|++||||+|.++ T Consensus 80 ~~~~~~~~~~~~~~~~--~L~~t~E~v~lP~~i~~~~~~rSS~aR~Gl~v~~tag------~iDpGy~G~ltLei~n~~~ 151 (204) T 1pkh_A 80 NYFKEKYNVDYVVEGG--VLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAG------WIDAGFKGKITLEIVAFDK 151 (204) T ss_dssp HHHHHHHCCSEEEESC--EEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCC------EECTTCEEEEEEEEEESSS T ss_pred EEECCCCCCEECCCCC--EEEEEEEEEECCCCEEEEEEECCHHHHCCCCCCCCCC------CCCCCCCCEEEEEEEECCC T ss_conf 2200366731405871--8999888996289818999814627647721234465------4888977669999997898 Q ss_pred CEEEECCCEEEEEEEEECCC Q ss_conf 27983398035689850887 Q gi|254780480|r 147 PIVVRVGSRLSQIRFVKERK 166 (367) Q Consensus 147 pI~v~~G~rl~Qi~f~~g~~ 166 (367) ||+||+|||||||+|++... T Consensus 152 pi~i~~G~~I~QlvF~~~~~ 171 (204) T 1pkh_A 152 PVILYKNQRIGQLIFSKLLS 171 (204) T ss_dssp CEEEETTCEEEEEEEEECSS T ss_pred CEEEECCCEEEEEEEEECCC T ss_conf 98983899999999997777 No 3 >2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis H37RV} PDB: 2qlp_A* Probab=100.00 E-value=3e-38 Score=268.08 Aligned_cols=154 Identities=21% Similarity=0.329 Sum_probs=129.3 Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCCC Q ss_conf 61586899999987984981789865657122588758989998123157888621100024047887368864866873 Q gi|254780480|r 4 GVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDANC 83 (367) Q Consensus 4 GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg~ 83 (367) |||||++|++++++|.|.++ ||+++||||||+|||||++++++.....+..+.. .+..+.........+++++|+||+ T Consensus 1 MILsd~~I~~~i~~g~i~I~-Pf~~~~iqpas~DLrLg~~~~v~~~~~~~~id~~-~~~~~~~~~~~~~~~~~~~l~Pg~ 78 (190) T 2qxx_A 1 MLLSDRDLRAEISSGRLGID-PFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPA-KQQDELTSLVQPVDGEPFVLHPGE 78 (190) T ss_dssp CBCCHHHHHHHHHTTSSEEE-SCCGGGEETTEEEEEBCSCEEECCCSSCSCCCTT-SCCGGGSEEECCCTTCCEEECTTC T ss_pred CCCCHHHHHHHHHCCCEEEC-CCCHHHCCCCCEEEEECCEEEEEECCCCCCCCCC-CCCCCCCEEEECCCCCEEEECCCE T ss_conf 91688999999985992685-8997883876173782463899504467644531-034432002450689869975991 Q ss_pred EEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEE Q ss_conf 29999888998499827998601343112503423207877554236674438999951686-52798339803568985 Q gi|254780480|r 84 VYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFV 162 (367) Q Consensus 84 ~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~ 162 (367) +||++|.|+|++|+|++|+++||||++|+|+++|.+++ +|||||+|+||||+.|.+ .||.+++|||||||+|+ T Consensus 79 ~~L~~T~E~i~lp~~~~~~~~~rSs~~R~Gl~~~~~ag------~iDpGy~G~l~lel~n~~~~~i~i~~G~riaQlvf~ 152 (190) T 2qxx_A 79 FVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAG------FIDPGFSGHITLELSNVANLPITLWPGMKIGQLCML 152 (190) T ss_dssp EEEEEBSSEEECCTTEEEEEECCHHHHTTTEEECCTTC------EECTTCEECCEEEEEECSSSCEEECTTSEEEEEEEE T ss_pred EEEEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCC------CCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEE T ss_conf 99999667886599989999705728756710233466------527997664899999378857798389999999999 Q ss_pred ECC Q ss_conf 088 Q gi|254780480|r 163 KER 165 (367) Q Consensus 163 ~g~ 165 (367) +-. T Consensus 153 ~~~ 155 (190) T 2qxx_A 153 RLT 155 (190) T ss_dssp ECS T ss_pred ECC T ss_conf 865 No 4 >1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A* Probab=100.00 E-value=1.2e-37 Score=264.08 Aligned_cols=155 Identities=23% Similarity=0.333 Sum_probs=129.4 Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCH-HHCCCCEEEEEECCEEEEEECCCCCCCCCC-----HHHHCCC--CEEEEEECCC Q ss_conf 6158689999998798498178986-565712258875898999812315788862-----1100024--0478873688 Q gi|254780480|r 4 GVLPDKAIATLAERGDIVSEHPLEK-NQIQPASIDLRLSSKAYRVRASFLPNIDGL-----VSDKIKH--FKLREIDLSG 75 (367) Q Consensus 4 GILsd~~I~~li~~g~I~i~~p~~~-~QIQPaSiDLRLG~~~~rv~asflp~~~~~-----v~~~l~~--~~~~eidl~~ 75 (367) |||||++|++++++|.|.++ |+++ +||||||+|||||+++++++.+..+..+.. ....... ......+.++ T Consensus 1 MiLSd~~I~~~i~~g~i~i~-P~~~~~~iqp~s~DLrLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (193) T 1xs1_A 1 MRLCDRDIEAWLDEGRLSIN-PRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGE 79 (193) T ss_dssp CBCCHHHHHHHHHHTSSEEE-SCCCGGGEETTEEEEEBCSEEBCBCGGGCSCEETTSCHHHHHHHHHHHBCCCEECCTTC T ss_pred CCCCHHHHHHHHHCCCEEEC-CCCHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCC T ss_conf 96788999999983993773-78845615884499864664999964135313566654200122210133126606898 Q ss_pred CEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCC Q ss_conf 6486687329999888998499827998601343112503423207877554236674438999951686-527983398 Q gi|254780480|r 76 GTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGS 154 (367) Q Consensus 76 g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~ 154 (367) +|+|+||++||++|.|+|++|+|++|.++||||++|+|++++++++ ++||||.|+++||+.|.+ .||.|++|| T Consensus 80 ~~~l~pg~~~l~~t~E~v~lp~~~~~~~~~rSs~~R~Gl~~~~~~g------~~dpG~~G~~~lel~n~~~~pi~l~~g~ 153 (193) T 1xs1_A 80 AFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAH------RIDPGWSGCIVLEFYNSGKLPLALRPGM 153 (193) T ss_dssp CEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCC------EECTTCEEEEEEEEEECSSSCEEECTTS T ss_pred EEEECCCCEEEEEEEEEEECCCCEEEEEEECCCHHEEEEEEECCCC------CCCCCCCCEEEEEEEECCCCCEEECCCC T ss_conf 1997699789999740164045489999965604402248732565------2379997428999995687757973899 Q ss_pred EEEEEEEEECC Q ss_conf 03568985088 Q gi|254780480|r 155 RLSQIRFVKER 165 (367) Q Consensus 155 rl~Qi~f~~g~ 165 (367) |||||+|++-. T Consensus 154 ~i~Qlvf~~~~ 164 (193) T 1xs1_A 154 LIGALSFEPLS 164 (193) T ss_dssp EEEEEEEEECS T ss_pred EEEEEEEEECC T ss_conf 99999999888 No 5 >3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, iodide phasing, hydrolase; 2.10A {Anaplasma phagocytophilum HZ} Probab=100.00 E-value=2.6e-35 Score=248.90 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=121.9 Q ss_pred CCCCHHHHHHHHHCCCEEECCCCCHHH---------CCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECC Q ss_conf 615868999999879849817898656---------57122588758989998123157888621100024047887368 Q gi|254780480|r 4 GVLPDKAIATLAERGDIVSEHPLEKNQ---------IQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLS 74 (367) Q Consensus 4 GILsd~~I~~li~~g~I~i~~p~~~~Q---------IQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~ 74 (367) .||||++|++++.+..+ |+ ||+++| +||+|+|||||++|+.++....+..+.. ..+........+ T Consensus 23 sILsD~~Ik~l~~~~~m-I~-PF~~~~v~~~~is~gL~p~syDlRLg~~f~vf~~~~~~~~d~~----~~~~~~~~~~~~ 96 (206) T 3km3_A 23 SVMPDHWIKERALKDGM-IS-PFVDHKEGTGVLSYGLSSYGYDARLDNKFKIFANTHSVVVDPK----NFSQDSFVDREG 96 (206) T ss_dssp EECCHHHHHHHHHHHCC-EE-SCCSSCBSSSSSCBEEETTEEEEEEEEEEEEECCTTCCCCBTT----BCCGGGEEEEES T ss_pred EEECHHHHHHHHHHCCC-CC-CCCHHCCCCCEEECCCCCCCEEEEECCEEEEEECCCCCCCCCC----CCCCCEEEECCC T ss_conf 66089999997744797-16-8631114665032045865012685454799604566645843----235305895589 Q ss_pred CCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECC Q ss_conf 86486687329999888998499827998601343112503423207877554236674438999951686-52798339 Q gi|254780480|r 75 GGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVG 153 (367) Q Consensus 75 ~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G 153 (367) ++|+|+||++||+.|.|++++|+|++|++++|||++|+|+.++.+ .+||||+|+|||||+|.+ .||+|||| T Consensus 97 ~~~iL~Pg~~~L~~T~E~i~lP~~i~~~~~~rSs~aR~Gl~v~~t--------~iDpGf~G~ltLel~N~~~~pi~ly~G 168 (206) T 3km3_A 97 DFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIVVNVT--------PLEPGWSGYVTLEFSNTSPLPVKVYAF 168 (206) T ss_dssp SEEEECTTEEEEEEEEEEEECCTTEEEEEECCHHHHTTTEEECCC--------CBCTTCEEEEEEEEEECSSSCEEEETT T ss_pred CEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCC--------CCCCCCCCEEEEEEEECCCCCEEEECC T ss_conf 839984994899998667774898779996224300153503675--------237987747999999777998898089 Q ss_pred CEEEEEEEEECC Q ss_conf 803568985088 Q gi|254780480|r 154 SRLSQIRFVKER 165 (367) Q Consensus 154 ~rl~Qi~f~~g~ 165 (367) |+|||+.|++.. T Consensus 169 ~~I~QlvF~~~~ 180 (206) T 3km3_A 169 EGACQFLFFSGK 180 (206) T ss_dssp SEEEEEEEEEC- T ss_pred CEEEEEEEEECC T ss_conf 979999999878 No 6 >2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A Probab=100.00 E-value=3.4e-34 Score=241.64 Aligned_cols=143 Identities=20% Similarity=0.319 Sum_probs=119.9 Q ss_pred CCCCCHHHHHHHHHCCCEEECCCCCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCC Q ss_conf 76158689999998798498178986565712258875898999812315788862110002404788736886486687 Q gi|254780480|r 3 KGVLPDKAIATLAERGDIVSEHPLEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDAN 82 (367) Q Consensus 3 ~GILsd~~I~~li~~g~I~i~~p~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg 82 (367) -+||||++|+++++++ ++ |++++||||||+|||||++.+..... ...+. .+.....+++..++++|+|| T Consensus 10 mMiLsd~~I~~li~~~---i~-p~~~~~iqp~s~DLrLg~~~~~~~~~-----~~~~~--~~~~~~~~~~~~e~~vl~Pg 78 (169) T 2yzj_A 10 LMILSHQSIKNLLGKV---IL-NYSEENVRENGYDLRICGDKYYELVQ-----GAELP--EKKATLREIEFKERAILSAN 78 (169) T ss_dssp --CCCHHHHHTTBTTT---EE-SCCGGGBCSSSEEEEEEEEEEEEEEE-----CCEET--TBCCEEEEEECSSEEEECTT T ss_pred EEEECHHHHHHHHHCC---CC-CCCHHHCCCCEEEEEECCEEEEEECC-----CCCCC--CCCCCEEEECCCCCEEECCC T ss_conf 8997899999999717---67-89977868866999932879998547-----65368--75563379537983898899 Q ss_pred CEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEEE Q ss_conf 32999988899849982799860134311250342320787755423667443899995168652798339803568985 Q gi|254780480|r 83 CVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFV 162 (367) Q Consensus 83 ~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI~v~~G~rl~Qi~f~ 162 (367) ++||++|.|++++|+|++|++++|||++|+|++++.. .|||||+|+++||+.| +.|+.+++|||++||+|+ T Consensus 79 ~~~lv~T~E~i~lP~~~~g~v~~RSsl~R~Gl~~~~~--------~iDpGy~G~l~l~l~n-~~~~~i~~G~riaQlvF~ 149 (169) T 2yzj_A 79 HTYLFESCEEFNMPADLAVLITLKSTLARNGFLAPPT--------VIDAGYKGKVNVAITA-VYNSSLKKGMATHHLIFL 149 (169) T ss_dssp EEEEEEEEEEEECCTTEEEEEEECHHHHTTTEECCCE--------EECTTCEEEEEEEEEE-SSSEEEETTCEEEEEEEE T ss_pred CEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCC--------CCCCCCCCEEEEEEEC-CCCCEEECCCEEEEEEEE T ss_conf 6999999218806998999999578612277687251--------0398975559999992-888277379989999999 Q ss_pred ECC Q ss_conf 088 Q gi|254780480|r 163 KER 165 (367) Q Consensus 163 ~g~ 165 (367) +.. T Consensus 150 ~~~ 152 (169) T 2yzj_A 150 KLD 152 (169) T ss_dssp ECS T ss_pred ECC T ss_conf 776 No 7 >1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A* Probab=100.00 E-value=1.4e-33 Score=237.64 Aligned_cols=184 Identities=20% Similarity=0.294 Sum_probs=149.4 Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHH----HHHHC Q ss_conf 76899999998752786036655443373167888145545666630455126775130156555587786----64311 Q gi|254780480|r 166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDF----WDPLF 241 (367) Q Consensus 166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~df----we~i~ 241 (367) ++|||.++++++++..|+.++.++. .+-.+.|+||+.. +.+..|++ .+++.+|.+.........+ |++.. T Consensus 1 MiLSd~~I~~~i~~g~i~i~P~~~~-~~iqp~s~DLrLg----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (193) T 1xs1_A 1 MRLCDRDIEAWLDEGRLSINPRPPV-ERINGATVDVRLG----NKFRTFRG-HTAAFIDLSGPKDEVSAALDRVMSDEIV 74 (193) T ss_dssp CBCCHHHHHHHHHHTSSEEESCCCG-GGEETTEEEEEBC----SEEBCBCG-GGCSCEETTSCHHHHHHHHHHHBCCCEE T ss_pred CCCCHHHHHHHHHCCCEEECCCCHH-HHCCCCEEEEECC----CEEEEEEC-CCCCCCCCCCCCCCCHHHHHCCCCCEEE T ss_conf 9678899999998399377378845-6158844998646----64999964-1353135666542001222101331266 Q ss_pred CCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECC--CCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC--C Q ss_conf 3557775399889978999863344428340164453043--33421342160456886654345667504788617--8 Q gi|254780480|r 242 SWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDH--SIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS--S 317 (367) Q Consensus 242 ~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~--~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~--~ 317 (367) . ..++.++|+||+|||+.|.|+|++|+|++|++.+.++ |.|.+.+++|||+||||.|.++ ||+.+ . T Consensus 75 ~--~~~~~~~l~pg~~~l~~t~E~v~lp~~~~~~~~~rSs~~R~Gl~~~~~~g~~dpG~~G~~~--------lel~n~~~ 144 (193) T 1xs1_A 75 L--DEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIV--------LEFYNSGK 144 (193) T ss_dssp C--CTTCCEEECTTCCEEEEEEEEEECCTTEEEEEECCHHHHTTTEESCSSCCEECTTCEEEEE--------EEEEECSS T ss_pred E--CCCCEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCHHEEEEEEECCCCCCCCCCCCEEE--------EEEEECCC T ss_conf 0--6898199769978999974016404548999996560440224873256523799974289--------99995687 Q ss_pred CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHHHHH Q ss_conf 88899479888999997637664222375434723266-6773443430 Q gi|254780480|r 318 VPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKHFHQ 365 (367) Q Consensus 318 ~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~f~~ 365 (367) .||.|++||+||||+|++|.++++++|+...+||||+| |+++||+|+. T Consensus 145 ~pi~l~~g~~i~Qlvf~~~~~~~~~~Y~~~~~g~Yq~q~g~~~Sk~~~d 193 (193) T 1xs1_A 145 LPLALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRIDKD 193 (193) T ss_dssp SCEEECTTSEEEEEEEEECSSCCSSCGGGCTTCSCSSBCSCCCCCGGGC T ss_pred CCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 7579738999999999988887431147777976788889877453579 No 8 >2qxx_A DCTP deaminase, deoxycytidine triphosphate deaminase; distorted beta barrel, hydrolase, nucleotide metabolism; HET: TTP 1PE; 2.00A {Mycobacterium tuberculosis H37RV} PDB: 2qlp_A* Probab=99.98 E-value=1.3e-31 Score=224.71 Aligned_cols=180 Identities=25% Similarity=0.371 Sum_probs=142.8 Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCC Q ss_conf 76899999998752786036655443373167888145545666630455126775130156555587786643113557 Q gi|254780480|r 166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDA 245 (367) Q Consensus 166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~~~~~ 245 (367) ++|||.+++++.++..++.++.++ .+-.+.|+||+.. +.+ +..+.++...++..+ +..++|+.....+ T Consensus 1 MILsd~~I~~~i~~g~i~I~Pf~~--~~iqpas~DLrLg----~~~---~v~~~~~~~~id~~~--~~~~~~~~~~~~~- 68 (190) T 2qxx_A 1 MLLSDRDLRAEISSGRLGIDPFDD--TLVQPSSIDVRLD----CLF---RVFNNTRYTHIDPAK--QQDELTSLVQPVD- 68 (190) T ss_dssp CBCCHHHHHHHHHTTSSEEESCCG--GGEETTEEEEEBC----SCE---EECCCSSCSCCCTTS--CCGGGSEEECCCT- T ss_pred CCCCHHHHHHHHHCCCEEECCCCH--HHCCCCCEEEEEC----CEE---EEEECCCCCCCCCCC--CCCCCCEEEECCC- T ss_conf 916889999999859926858997--8838761737824----638---995044676445310--3443200245068- Q ss_pred CCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEEC--CCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC--CCCEE Q ss_conf 77539988997899986334442834016445304--333421342160456886654345667504788617--88889 Q gi|254780480|r 246 PEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYD--HSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS--SVPFV 321 (367) Q Consensus 246 ~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~--~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~--~~p~~ 321 (367) .+.++|+||+|||+.|.|+|++|+|++|.+.+.+ +|.|.+.+++|||+||||.|.++ ||+.+ ..|+. T Consensus 69 -~~~~~l~Pg~~~L~~T~E~i~lp~~~~~~~~~rSs~~R~Gl~~~~~ag~iDpGy~G~l~--------lel~n~~~~~i~ 139 (190) T 2qxx_A 69 -GEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHIT--------LELSNVANLPIT 139 (190) T ss_dssp -TCCEEECTTCEEEEEBSSEEECCTTEEEEEECCHHHHTTTEEECCTTCEECTTCEECCE--------EEEEECSSSCEE T ss_pred -CCEEEECCCEEEEEEEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEE--------EEEEECCCCCEE T ss_conf -98699759919999966788659998999970572875671023346652799766489--------999937885779 Q ss_pred EECCCEEEEEEEEECCCCCCCCCCC-CCCCCCCCC-CCCHHHHHHHC Q ss_conf 9479888999997637664222375-434723266-67734434305 Q gi|254780480|r 322 LEHGQIIGRLKYESMDGEPERLYGE-ARGSHYQSQ-ALKLSKHFHQT 366 (367) Q Consensus 322 l~~g~~i~~l~~~~~~~~p~~~Yg~-~~~s~Yq~Q-gl~lsk~f~~~ 366 (367) |++||+||||+|++|+++++++||. ..++|||+| |+++||.|++. T Consensus 140 i~~G~riaQlvf~~~~~~~~~~Y~~~~~~gkYq~q~g~~~Sk~~~df 186 (190) T 2qxx_A 140 LWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNF 186 (190) T ss_dssp ECTTSEEEEEEEEECSSCCSSCTTSGGGTCSCTTCCSCCCCCTTTTC T ss_pred ECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC T ss_conf 83899999999998658765454345468878888998750021264 No 9 >3km3_A DCTP deaminase, deoxycytidine triphosphate deaminase; ssgcid, NIH, niaid, SBRI, UW, decode, iodide phasing, hydrolase; 2.10A {Anaplasma phagocytophilum HZ} Probab=99.97 E-value=3.5e-31 Score=221.95 Aligned_cols=175 Identities=14% Similarity=0.155 Sum_probs=135.0 Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCC-CCC-----CC-EEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHH Q ss_conf 88768999999987527860366554-433-----73-167888145545666630455126775130156555587786 Q gi|254780480|r 164 ERKFCSQEELSALHELSPLVQDGLRD-FSG-----KG-VALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDF 236 (367) Q Consensus 164 g~~~LsD~eL~~lh~~~~LV~~~~~~-~~~-----~G-l~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~df 236 (367) +-++|||.+++++..++.++. +..+ ..+ -| .+.|+||+.. +.+.-|+. .+..++|..+.. . T Consensus 21 ~MsILsD~~Ik~l~~~~~mI~-PF~~~~v~~~~is~gL~p~syDlRLg----~~f~vf~~-~~~~~~d~~~~~------~ 88 (206) T 3km3_A 21 SMSVMPDHWIKERALKDGMIS-PFVDHKEGTGVLSYGLSSYGYDARLD----NKFKIFAN-THSVVVDPKNFS------Q 88 (206) T ss_dssp CCEECCHHHHHHHHHHHCCEE-SCCSSCBSSSSSCBEEETTEEEEEEE----EEEEEECC-TTCCCCBTTBCC------G T ss_pred CCEEECHHHHHHHHHHCCCCC-CCCHHCCCCCEEECCCCCCCEEEEEC----CEEEEEEC-CCCCCCCCCCCC------C T ss_conf 406608999999774479716-86311146650320458650126854----54799604-566645843235------3 Q ss_pred HHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC Q ss_conf 64311355777539988997899986334442834016445304333421342160456886654345667504788617 Q gi|254780480|r 237 WDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS 316 (367) Q Consensus 237 we~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~ 316 (367) ++.+. ..++.|+|+||+|||+.|.|+|++|+|++|.+.+.++.++.+..|+|||+||||.|.+| ||+.+ T Consensus 89 ~~~~~---~~~~~~iL~Pg~~~L~~T~E~i~lP~~i~~~~~~rSs~aR~Gl~v~~t~iDpGf~G~lt--------Lel~N 157 (206) T 3km3_A 89 DSFVD---REGDFCIIPPNSFMLAKTVEYFNIPRDVMVVCVGKSTYARCGIVVNVTPLEPGWSGYVT--------LEFSN 157 (206) T ss_dssp GGEEE---EESSEEEECTTEEEEEEEEEEEECCTTEEEEEECCHHHHTTTEEECCCCBCTTCEEEEE--------EEEEE T ss_pred CEEEE---CCCCEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE--------EEEEE T ss_conf 05895---58983998499489999866777489877999622430015350367523798774799--------99997 Q ss_pred --CCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHH Q ss_conf --888899479888999997637664222375434723266-6773443 Q gi|254780480|r 317 --SVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKH 362 (367) Q Consensus 317 --~~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~ 362 (367) +.|+.|++||+||||+|++|+++++.+|+ +.++|||+| |.+|.|- T Consensus 158 ~~~~pi~ly~G~~I~QlvF~~~~~~~~~~Y~-~~~GkYq~q~g~t~p~~ 205 (206) T 3km3_A 158 TSPLPVKVYAFEGACQFLFFSGKERCSKSYD-EAGGKYMGQSDVTLPII 205 (206) T ss_dssp CSSSCEEEETTSEEEEEEEEEC--------------------------- T ss_pred CCCCCEEEECCCEEEEEEEEECCCCCCCCCC-CCCCCCCCCCCCCCCCC T ss_conf 7799889808997999999987876666667-77987599989878885 No 10 >1pkh_A Bifunctional deaminase/diphosphatase; DCTP deaminase, dutpase, DCD-DUT, MJ0430, DCTP, DUTP, hydrolase; 1.42A {Methanocaldococcus jannaschii} SCOP: b.85.4.1 PDB: 1ogh_A 1pkj_A* 1pkk_A* 2hxb_A 2hxe_A 3gf0_A 2hxd_A* Probab=99.96 E-value=2.5e-29 Score=209.86 Aligned_cols=183 Identities=17% Similarity=0.178 Sum_probs=136.2 Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECC-----CCC--------EEECCCCCCCC Q ss_conf 76899999998752786036655443373167888145545666630455126-----775--------13015655558 Q gi|254780480|r 166 KFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKR-----HTA--------AIDVDSENKYD 232 (367) Q Consensus 166 ~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkk-----ht~--------~IDl~k~~~y~ 232 (367) ++|||.+++++.++..++.++.+. .+-.+.|+||+.. +.+..|+... ... ...+...+... T Consensus 1 MILsd~~I~~~i~~g~i~I~Pf~~--~~i~p~s~DlrLg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (204) T 1pkh_A 1 MILSDKDIIDYVTSKRIIIKPFNK--DFVGPCSYDVTLG----DEFIIYDDEVYDLSKELNYKRIKIKNSILVCPLNYNL 74 (204) T ss_dssp CBCCHHHHHHHHHTTSSEEESCCG--GGBCSSCEEEEBC----SEEEEECCSSCCTTSCCCEEEEECSSEEEEECTTCCC T ss_pred CCCCHHHHHHHHHCCCEEECCCCH--HHCCCCEEEEEEC----CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 927889999998769867847896--7648744888726----8799960511365445652101356421015554333 Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEECCEEECCCCCCCCCCCCCCEE Q ss_conf 77866431135577753998899789998633444283401644--5304333421342160456886654345667504 Q gi|254780480|r 233 ESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKA 310 (367) Q Consensus 233 ~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~ 310 (367) .+..++.+... .+..++++|+ ||+.|.|+|++|+|++|.+ +++.+|.|.+.+++|||+||||.|.. T Consensus 75 ~~~~~~~~~~~--~~~~~~~~~~--~L~~t~E~v~lP~~i~~~~~~rSS~aR~Gl~v~~tag~iDpGy~G~l-------- 142 (204) T 1pkh_A 75 TEEKINYFKEK--YNVDYVVEGG--VLGTTNEYIELPNDISAQYQGRSSLGRVFLTSHQTAGWIDAGFKGKI-------- 142 (204) T ss_dssp CHHHHHHHHHH--HCCSEEEESC--EEEEEEEEEECCTTEEEEEEECHHHHTTTEESCSSCCEECTTCEEEE-------- T ss_pred CCCCCEEECCC--CCCEECCCCC--EEEEEEEEEECCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCEE-------- T ss_conf 43220220036--6731405871--89998889962898189998146276477212344654888977669-------- Q ss_pred EEEECC-CCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHC Q ss_conf 788617-888899479888999997637664222375434723266-67734434305 Q gi|254780480|r 311 VLEVRS-SVPFVLEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQ-ALKLSKHFHQT 366 (367) Q Consensus 311 vLevr~-~~p~~l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Q-gl~lsk~f~~~ 366 (367) +||+.+ ..|+.|++||+||||+|++|+++|+.+|+...+++||+| |++.||.|+.- T Consensus 143 tLei~n~~~pi~i~~G~~I~QlvF~~~~~~~~~~Y~~~~~g~Yq~q~g~~~S~~~~d~ 200 (204) T 1pkh_A 143 TLEIVAFDKPVILYKNQRIGQLIFSKLLSPADVGYSERKTSKYAYQKSVMPSLIHLDN 200 (204) T ss_dssp EEEEEESSSCEEEETTCEEEEEEEEECSSCCCCSEEEECC------------------ T ss_pred EEEEEECCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 9999978989898389999999999777775556555658714788998631200565 No 11 >2yzj_A 167AA long hypothetical dutpase; all beta proteins, hypothetical protein, NPPSFA; HET: DUD; 1.66A {Sulfolobus tokodaii} PDB: 2zdc_A Probab=99.91 E-value=9.1e-24 Score=173.57 Aligned_cols=161 Identities=17% Similarity=0.188 Sum_probs=118.8 Q ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHCC Q ss_conf 08876899999998752786036655443373167888145545666630455126775130156555587786643113 Q gi|254780480|r 163 KERKFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFS 242 (367) Q Consensus 163 ~g~~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~~ 242 (367) ...++|||.+++++-++ ++ .+.+ ..+-.+.|+||+.. +. .|....+...++.+.... +++. T Consensus 8 ~~mMiLsd~~I~~li~~--~i-~p~~--~~~iqp~s~DLrLg----~~--~~~~~~~~~~~~~~~~~~-------~~~~- 68 (169) T 2yzj_A 8 EKLMILSHQSIKNLLGK--VI-LNYS--EENVRENGYDLRIC----GD--KYYELVQGAELPEKKATL-------REIE- 68 (169) T ss_dssp ----CCCHHHHHTTBTT--TE-ESCC--GGGBCSSSEEEEEE----EE--EEEEEEECCEETTBCCEE-------EEEE- T ss_pred CCEEEECHHHHHHHHHC--CC-CCCC--HHHCCCCEEEEEEC----CE--EEEEECCCCCCCCCCCCE-------EEEC- T ss_conf 77899789999999971--76-7899--77868866999932----87--999854765368755633-------7953- Q ss_pred CCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEE Q ss_conf 55777539988997899986334442834016445304333421342160456886654345667504788617888899 Q gi|254780480|r 243 WDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVL 322 (367) Q Consensus 243 ~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l 322 (367) .++.++|+||+||++.|.|+|++|+|++|.+.+.++..+.+..+++|++||||.|.+ +||+.+..|+.| T Consensus 69 ---~~e~~vl~Pg~~~lv~T~E~i~lP~~~~g~v~~RSsl~R~Gl~~~~~~iDpGy~G~l--------~l~l~n~~~~~i 137 (169) T 2yzj_A 69 ---FKERAILSANHTYLFESCEEFNMPADLAVLITLKSTLARNGFLAPPTVIDAGYKGKV--------NVAITAVYNSSL 137 (169) T ss_dssp ---CSSEEEECTTEEEEEEEEEEEECCTTEEEEEEECHHHHTTTEECCCEEECTTCEEEE--------EEEEEESSSEEE T ss_pred ---CCCCEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCEE--------EEEEECCCCCEE T ss_conf ---798389889969999992188069989999995786122776872510398975559--------999992888277 Q ss_pred ECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 47988899999763766422237543472326667 Q gi|254780480|r 323 EHGQIIGRLKYESMDGEPERLYGEARGSHYQSQAL 357 (367) Q Consensus 323 ~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl 357 (367) +.||+||||+|++|.++++++| .++||||.| T Consensus 138 ~~G~riaQlvF~~~~~~~~~~Y----~G~YQG~~~ 168 (169) T 2yzj_A 138 KKGMATHHLIFLKLDKPTERLY----NGKYQGGIL 168 (169) T ss_dssp ETTCEEEEEEEEECSSCCSSCC----CSTTTTTCC T ss_pred ECCCEEEEEEEEECCCCCCCCC----CCEECCCEE T ss_conf 3799899999997767777881----889078573 No 12 >2r9q_A AGR_C_764P, 2'-deoxycytidine 5'-triphosphate deaminase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.20A {Agrobacterium tumefaciens str} Probab=99.85 E-value=2.1e-20 Score=151.62 Aligned_cols=151 Identities=17% Similarity=0.235 Sum_probs=86.2 Q ss_pred CCCCCHHHHHHHHHCCCEEECCCCCHHHCC---CCEEEEEECC----EEEEEECCCCCCCC-CCHHH-HCCCC-EEEEEE Q ss_conf 761586899999987984981789865657---1225887589----89998123157888-62110-00240-478873 Q gi|254780480|r 3 KGVLPDKAIATLAERGDIVSEHPLEKNQIQ---PASIDLRLSS----KAYRVRASFLPNID-GLVSD-KIKHF-KLREID 72 (367) Q Consensus 3 ~GILsd~~I~~li~~g~I~i~~p~~~~QIQ---PaSiDLRLG~----~~~rv~asflp~~~-~~v~~-~l~~~-~~~eid 72 (367) +-.|||.+++++-++..|+.+. ....+. .-||||.... ..||-+.+. +..| .++.. +..++ +..... T Consensus 172 ~~~lsd~~l~~lh~~~~lv~~~--~~~~~~~gl~lsVdL~~~~~~~iigyrAk~h~-~~Id~~k~~~y~~~~fwe~i~~~ 248 (370) T 2r9q_A 172 HALLNESEVLKLHETETLVASE--NPNVTGGGIALSIDLKGFGENGLIGYRGKHHT-AVVDVDKKAQHDVLDFWEPLFAR 248 (370) T ss_dssp CCBCCHHHHHHHHHHSCSBC-----CCCCC--EEEEBCCSCCTTTTEEEEEECSSC-CCEETTCGGGSCGGGTEEEEECC T ss_pred CCCCCHHHHHHHHHCCCCCCCC--CCCCCCCCCEEEEEECCCCCCCCEEEECCCCC-CCEEECCCCCCCHHHHHHEEECC T ss_conf 7666889999877408732477--54414788258998335677871799614678-83660565524687843102127 Q ss_pred CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCE--------EEEEEECCC Q ss_conf 688648668732999988899849982799860134311250342320787755423667443--------899995168 Q gi|254780480|r 73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSG--------PLYLEILPR 144 (367) Q Consensus 73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G--------~l~lEI~~~ 144 (367) -++.++|+||++||+.|.|+|++|+|++|.+.||||++|.|+.. . ++| +||||.| +++||+.+. T Consensus 249 ~~~~~iL~P~ef~l~~T~E~v~iP~~~aa~~~~rs~~~r~g~~~--~----agf--~DpGf~g~~~~~~g~~~vLev~~~ 320 (370) T 2r9q_A 249 GRAELILDPDEFYILVSREAVHVPPLYAAEMTPFDPLVGEFRVH--Y----AGF--FDPGFGHAQAGGTGSRAVLEVRSH 320 (370) T ss_dssp SSSEEEECTTCCEEEEEEEEECCCTTEEEEEEECGGGTTTEEEE--S----CCE--ECTTTTC-----CCEEEEEEEEEC T ss_pred CCCEEEEECCCEEEEEEEEEEEECCCEEEEEEEECHHHCCCEEE--C----CCC--CCCCCCCCCCCCCCCEEEEEEECC T ss_conf 89779996797999999999997897399997043432582676--4----751--769987644556685599999269 Q ss_pred CCCEEEECCCEEEEEEEEEC Q ss_conf 65279833980356898508 Q gi|254780480|r 145 TFPIVVRVGSRLSQIRFVKE 164 (367) Q Consensus 145 sfpI~v~~G~rl~Qi~f~~g 164 (367) ..|+.+++|||||||+|.+- T Consensus 321 ~~p~~l~~G~~I~qlvfe~l 340 (370) T 2r9q_A 321 EVPFILEHGQIVGRLVYEHM 340 (370) T ss_dssp SSCEEEETTCEEEEEEEEEB T ss_pred CCCEEEECCCEEEEEEEEEC T ss_conf 88869838999999999998 No 13 >1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A Probab=99.61 E-value=1.5e-15 Score=119.90 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=76.4 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+++||+.++++|.|++++|++..|++.||||++|.||.++.. .||+||+|+|++++.|.+ .|+.+++ T Consensus 24 ~~d~~i~pg~~~~i~tg~~i~iP~~~~~~i~~RSsl~k~gl~v~~g--------vID~gy~G~l~v~l~N~~~~~~~i~~ 95 (134) T 1dun_A 24 PYDIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGLLINGG--------IIDEGYTGEIQVICTNIGKSNIKLIE 95 (134) T ss_dssp SSCEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTEEEECC--------EEETTCCSCCEEEEEECSSSCEEECT T ss_pred CCCEEECCCCEEEEECCCEEECCCCEEEEEECCCHHCCCCCCCCCE--------EECCCCCCEEEEEEEECCCCCEEECC T ss_conf 9898999999899988739976862799998666320278312433--------87688864699999989998779848 Q ss_pred CCEEEEEEEEECC Q ss_conf 9803568985088 Q gi|254780480|r 153 GSRLSQIRFVKER 165 (367) Q Consensus 153 G~rl~Qi~f~~g~ 165 (367) |+|||||.|.+-. T Consensus 96 G~rIaQlv~~~~~ 108 (134) T 1dun_A 96 GQKFAQLIILQHH 108 (134) T ss_dssp TCEEEEEEEEECC T ss_pred CCEEEEEEEEECC T ss_conf 9969999997868 No 14 >2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Probab=99.57 E-value=9.5e-13 Score=101.63 Aligned_cols=188 Identities=13% Similarity=0.018 Sum_probs=132.1 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+|+||+..+++|--++.+|++.++.+.+|||.| +++++- .||+||+|+|.+=+.|.+ -|+.+.| T Consensus 31 ~~~i~l~pge~~~i~tGi~~~iP~g~~~~l~~rS~~~---~~~~~G--------vID~gYrGei~v~l~N~~~~~~~i~~ 99 (278) T 2bsy_A 31 KTTILLRPMKTTTVDLGLYARPPEGHGLMLWGSTSRP---VTSHVG--------IIDPGYTGELRLILQNQRRYNSTLRP 99 (278) T ss_dssp SSCEEECTTSEEEEEEEEEEECCTTEEEEEEEECSSS---EEECCE--------EECTTCCSCEEEEEEESSSSCEEECT T ss_pred CCCEEECCCCEEEECCCEEEECCCCEEEEEECCCCCC---CCCCCC--------CCCCCCCCEEEEEEEECCCCCEEECC T ss_conf 9998988998279658869977999189997576886---214665--------27599973789999948998778869 Q ss_pred CCEEEEEEEEEC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCC Q ss_conf 980356898508-8768999999987527860366554433731678881455456666304551267751301565555 Q gi|254780480|r 153 GSRLSQIRFVKE-RKFCSQEELSALHELSPLVQDGLRDFSGKGVALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKY 231 (367) Q Consensus 153 G~rl~Qi~f~~g-~~~LsD~eL~~lh~~~~LV~~~~~~~~~~Gl~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y 231 (367) |+.-..|.+++- -+..... .. +|.. . ++. .-..| T Consensus 100 G~l~~~l~~~~~~~P~~~~~---------------~~-----------~l~~--------P-----~~~------~DAG~ 134 (278) T 2bsy_A 100 SELKIHLAAFRYATPQMEED---------------KG-----------PINH--------P-----QYP------GDVGL 134 (278) T ss_dssp TSCEEEEEEEEEECCCC-------------------C-----------CBCC--------C-----SST------TCCCE T ss_pred CCEEEEEEEEEECCCCEECC---------------CC-----------CCCC--------C-----CCC------CCCEE T ss_conf 85899998887216713147---------------56-----------4789--------9-----888------76216 Q ss_pred CHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEEC--CCCCCEEEECCEEECCCCCCCCCCCCCCE Q ss_conf 8778664311355777539988997899986334442834016445304--33342134216045688665434566750 Q gi|254780480|r 232 DESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYD--HSIGEFRVHYAGFFDPGFGCVLPQEVGAK 309 (367) Q Consensus 232 ~~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~--~~~g~~r~h~AGf~DpGf~~~~~~~~~~~ 309 (367) | +++ ...++|+|++..+..|--.+.+|+++++.+.+.+ +.-|.. +.... |+.|.+ . T Consensus 135 D-------l~~----~~d~~i~P~~~~~i~tgi~~~~p~~~~~~I~~RSsla~kGl~-v~~~~----~y~Gei------~ 192 (278) T 2bsy_A 135 D-------VSL----PKDLALFPHQTVSVTLTVPPPSIPHHRPTIFGRSGLAMQGIL-VKPCR----WRRGGV------D 192 (278) T ss_dssp E-------EEC----SSCEEECTTCEEEEEECSCCCCCTTEEEEEECCHHHHHTTEE-ECCEE----CBTTBE------E T ss_pred E-------EEE----CCCEEECCCCEEEEECCEEEECCCCEEEEEEECCCCCCCCEE-EECCC----EECCEE------E T ss_conf 7-------995----886899999889997486996799839999856502448989-95994----035569------9 Q ss_pred EEEEECCCCCEEEECCCEEEEEEEEECCCC Q ss_conf 478861788889947988899999763766 Q gi|254780480|r 310 AVLEVRSSVPFVLEHGQIIGRLKYESMDGE 339 (367) Q Consensus 310 ~vLevr~~~p~~l~~g~~i~~l~~~~~~~~ 339 (367) ..|.+.++.|+.++.|+|||||+|.+.... T Consensus 193 v~l~N~~~~~~~I~~G~RIAQlvf~~~~~~ 222 (278) T 2bsy_A 193 VSLTNFSDQTVFLNKYRRFCQLVYLHKHHL 222 (278) T ss_dssp EEEEECSSSCEEECTTCEEEEEEEEEGGGE T ss_pred EEEEECCCCCEEECCCCEEEEEEEEECCCC T ss_conf 999989898789789997999999513446 No 15 >1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A Probab=99.49 E-value=9.4e-14 Score=108.19 Aligned_cols=85 Identities=19% Similarity=0.169 Sum_probs=76.7 Q ss_pred CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE Q ss_conf 6886486687329999888998499827998601343112503423207877554236674438999951686-527983 Q gi|254780480|r 73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR 151 (367) Q Consensus 73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~ 151 (367) ..+..+|+|++.++++|.+++.+|.+..+.+.||||++|.||.++. ..||+||+|+|++.+.|.+ .|+.+. T Consensus 22 ~~e~~~i~P~~~~~i~Tg~~i~~p~~~~~~i~~RSsl~~~gl~v~~--------GvID~gY~Gei~v~l~N~~~~~~~i~ 93 (136) T 1f7d_A 22 AAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLG--------GVIDEGYRGEIGVIMINVSRKSITLM 93 (136) T ss_dssp CSSCEEECTTCEEEEECCCEECCCTTEEEEEECCHHHHTTTEEEEC--------CEECTTCCSCCEEEEEECSSSCEEEC T ss_pred CCCCEEECCCCEEEEECCEEEECCCCCEEEEECCCCHHCEEEEEEE--------EEECCCCCCEEEEEEEECCCCCEEEC T ss_conf 5988899999899997897998597759999826723120478655--------57888777668999999999988837 Q ss_pred CCCEEEEEEEEECC Q ss_conf 39803568985088 Q gi|254780480|r 152 VGSRLSQIRFVKER 165 (367) Q Consensus 152 ~G~rl~Qi~f~~g~ 165 (367) +|+||+||.|.+-. T Consensus 94 ~G~riaQlv~~~~~ 107 (136) T 1f7d_A 94 ERQKIAQLIILPCK 107 (136) T ss_dssp TTCEEEEEEEEECC T ss_pred CCCEEEEEEEECCC T ss_conf 99989999995157 No 16 >2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A Probab=99.44 E-value=3.6e-13 Score=104.42 Aligned_cols=84 Identities=12% Similarity=0.146 Sum_probs=76.2 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+++|++.++++|.+.+.+|++..|++.||||+++-+|++.. ..||+||+|+|++.+.|.+ .|+.+++ T Consensus 37 ~~d~~i~P~~~~~i~tgi~i~iP~g~~~~i~~RSsl~~kgl~v~~--------GvID~~YrGei~v~l~N~~~~~~~i~~ 108 (147) T 2ol1_A 37 AYDYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLKGIDIGG--------GVIDEDYRGNIGVILINNGKCTFNVNT 108 (147) T ss_dssp SSCEEECTTEEEEEECCEEECCCTTEEEEEECCHHHHTTTEEEEC--------CEECTTCCSCCEEEEEECSSSCEEECT T ss_pred CCCEEECCCCEEEEECCCEEECCCCCCCEEECCCCCEEEEEEECC--------EEECCCCCCCEEEEEEECCCCCEEECC T ss_conf 867499999989998998868898760117036765157899686--------669977786689999947997778049 Q ss_pred CCEEEEEEEEECC Q ss_conf 9803568985088 Q gi|254780480|r 153 GSRLSQIRFVKER 165 (367) Q Consensus 153 G~rl~Qi~f~~g~ 165 (367) |+||+||.|.+-. T Consensus 109 G~rIaQlv~~~~~ 121 (147) T 2ol1_A 109 GDRIAQLIYQRIY 121 (147) T ss_dssp TCEEEEEEEEEEE T ss_pred CCEEEEEEEECCC T ss_conf 9979999983366 No 17 >3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica} Probab=99.40 E-value=2.4e-12 Score=98.96 Aligned_cols=87 Identities=14% Similarity=0.227 Sum_probs=76.5 Q ss_pred EECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCE Q ss_conf 7368864866873299998889984998279986013431-12503423207877554236674438999951686-527 Q gi|254780480|r 71 IDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPI 148 (367) Q Consensus 71 idl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI 148 (367) +--.+.++++|++.++++|-+++.+|++..|.+.||||++ |.++.+. + ..||+||+|+|.+.+.|.+ -++ T Consensus 50 L~a~ed~vI~P~~~~lI~TGi~i~iP~g~~~~i~~RSs~~~k~gl~~~--~------GvID~gYrGel~v~l~N~~~~~~ 121 (163) T 3lqw_A 50 LYSNTNFIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLALKYGIDVG--A------GVIDEDYRGEIKVILFNHSNEIF 121 (163) T ss_dssp EECSSCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEEC--C------CEECTTCCSEEEEEEEECSSSCE T ss_pred EECCCCEEECCCCEEEEECCCEEECCCCCEEEEEECCCCCCCCCEEEE--C------CEECCCCCEEEEEEEEECCCCCE T ss_conf 955999899999889997884786598978999712673301434511--5------43946897199999998999865 Q ss_pred EEECCCEEEEEEEEECC Q ss_conf 98339803568985088 Q gi|254780480|r 149 VVRVGSRLSQIRFVKER 165 (367) Q Consensus 149 ~v~~G~rl~Qi~f~~g~ 165 (367) .+.+|+|||||.|.+-. T Consensus 122 ~I~~G~RIaQlv~~~~~ 138 (163) T 3lqw_A 122 NGRKGDRIAQLIIERIS 138 (163) T ss_dssp EECTTCEEEEEEEEECC T ss_pred ECCCCCEEEEEEEEECC T ss_conf 04589999999860317 No 18 >3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* Probab=99.35 E-value=3.4e-12 Score=98.04 Aligned_cols=84 Identities=17% Similarity=0.244 Sum_probs=73.6 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE Q ss_conf 8864866873299998889984998279986013431-12503423207877554236674438999951686-527983 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR 151 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~ 151 (367) .+..+++|++.++++|.+.+.+|++.+|++.||||++ |.+|.+.. ..||+||+|+|++.+.|.+ -|+.+. T Consensus 31 ~~~~~i~p~~~~~i~tgi~~~ip~g~~g~i~~RSsl~~k~gL~~~~--------GvID~gYrGei~v~l~N~~~~~~~i~ 102 (141) T 3c2t_A 31 VEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLA--------GVIDEDYTGEVKVILYNTTERDYIIK 102 (141) T ss_dssp SSCEEECTTCEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEECC--------CEECTTCCSCCEEEEEECSSSCEEEC T ss_pred CCCCEECCCCEEEEECCCEEECCCEEEEEEEECCCCEEECCEEEEC--------EEECCCCCCEEEEEEEECCCCCEEEC T ss_conf 9253978871599965843407860466898066782238979745--------37978888289999998999977710 Q ss_pred CCCEEEEEEEEECC Q ss_conf 39803568985088 Q gi|254780480|r 152 VGSRLSQIRFVKER 165 (367) Q Consensus 152 ~G~rl~Qi~f~~g~ 165 (367) +|+||+||.|..-. T Consensus 103 ~G~RIaQlv~~~~~ 116 (141) T 3c2t_A 103 KGDRIAQLILEQIV 116 (141) T ss_dssp TTCEEEEEEEEECC T ss_pred CCCEEEEEEECCCC T ss_conf 89999999963657 No 19 >3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} Probab=99.30 E-value=1.7e-11 Score=93.54 Aligned_cols=84 Identities=18% Similarity=0.237 Sum_probs=73.5 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEEC Q ss_conf 886486687329999888998499827998601343112503423207877554236674438999951686-5279833 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~ 152 (367) .+..+++|++..+++|.+.+.+|++..|++.||||+++-+..+ ..+ ..||+||.|+|.+.+.|.+ -|+.+.+ T Consensus 49 ~~d~~i~p~~~~~i~Tgi~v~iP~g~~~~I~~RSsl~~k~~l~-~~~------GvID~dYrGei~v~l~N~~~~~~~i~~ 121 (160) T 3ecy_A 49 AYDVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFID-VGA------GVVDEDYRGNLGVVLFNHSDVDFEVKH 121 (160) T ss_dssp SSCEEECTTCEEEEECCEEEECCTTCEEEEECC-------CEE-EEC------EEECTTCCSCCEEEEEECSSSCEEECT T ss_pred CCCEEECCCCEEEEECCCEEECCCCEEEEEECCCCCEEECCEE-CCC------CCCCCCCCCCCCEEEEECCCCCEECCC T ss_conf 6567999996699978975718999699997354050427700-577------743624255461999989998701589 Q ss_pred CCEEEEEEEEEC Q ss_conf 980356898508 Q gi|254780480|r 153 GSRLSQIRFVKE 164 (367) Q Consensus 153 G~rl~Qi~f~~g 164 (367) |+||+||.|.+- T Consensus 122 G~RIaQlv~~~~ 133 (160) T 3ecy_A 122 GDRIAQFICERI 133 (160) T ss_dssp TCEEEEEEEEEE T ss_pred CCEEEEEEECCC T ss_conf 998999998534 No 20 >3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} Probab=99.29 E-value=1.2e-11 Score=94.37 Aligned_cols=84 Identities=17% Similarity=0.222 Sum_probs=74.0 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCC-CCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE Q ss_conf 886486687329999888998499827998601343112-503423207877554236674438999951686-527983 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRI-DVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR 151 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRL-gif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~ 151 (367) .+..+|+|++..+++|...+.+|++..|.+.||||+++- +|.+. + ..||+||.|+|.+.+.|.+ -|+.+. T Consensus 47 ~ed~~I~p~~~~~i~Tgi~i~ip~g~~~~I~~RSsl~~k~gl~~~--~------GvID~gYrGeI~v~l~N~~~~~~~I~ 118 (165) T 3ca9_A 47 VEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVL--A------GVIDEDYTGEVKVILYNTTERDYIIK 118 (165) T ss_dssp SSCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEEC--C------CEECTTCCSCCEEEEEECSSSCEEEC T ss_pred CCHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEECCEEEE--C------CEECCCCCCEEEEEEEECCCCCEEEE T ss_conf 862113999659997896121786078899856656301887862--3------26866677278999997999986620 Q ss_pred CCCEEEEEEEEECC Q ss_conf 39803568985088 Q gi|254780480|r 152 VGSRLSQIRFVKER 165 (367) Q Consensus 152 ~G~rl~Qi~f~~g~ 165 (367) +|+||+||.|..-. T Consensus 119 ~G~RIaQlv~~~~~ 132 (165) T 3ca9_A 119 KGDRIAQLILEQIV 132 (165) T ss_dssp TTCEEEEEEEEECC T ss_pred CCCEEEEEEECCCC T ss_conf 89999999974657 No 21 >3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae} Probab=99.29 E-value=1.3e-11 Score=94.26 Aligned_cols=82 Identities=16% Similarity=0.263 Sum_probs=72.6 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE Q ss_conf 8864866873299998889984998279986013431-12503423207877554236674438999951686-527983 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR 151 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~ 151 (367) .+.+++.|++..+++|...+.+|++..|++.||||++ |.++.+. + ..||+||+|+|.+.+.|.+ -|+.+. T Consensus 36 ~ed~~i~p~~~~~I~tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~--~------GvID~dYrGei~v~l~N~~~~~~~i~ 107 (147) T 3p48_A 36 SQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTG--A------GVVDRDYTGEVKVVLFNHSQRDFAIK 107 (147) T ss_dssp SSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEC--C------CEECTTCCSCCEEEEEECSSSCEEEC T ss_pred CCCEEECCCCEEEEECCCEECCCCCCEEEEECCCCCCEEECCCCC--C------CCCCCCCCCCEEEEEEECCCCCEEEE T ss_conf 889799999769997784100787516889735653201011057--6------62997887525999996799217994 Q ss_pred CCCEEEEEEEEE Q ss_conf 398035689850 Q gi|254780480|r 152 VGSRLSQIRFVK 163 (367) Q Consensus 152 ~G~rl~Qi~f~~ 163 (367) +|+||+||.|.+ T Consensus 108 ~G~rIaQlv~~~ 119 (147) T 3p48_A 108 KGDRVAQLILEK 119 (147) T ss_dssp TTCEEEEEEEEE T ss_pred CCCEEEEEEEEC T ss_conf 899799999821 No 22 >3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphatase, DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A Probab=99.28 E-value=1.4e-11 Score=94.03 Aligned_cols=83 Identities=16% Similarity=0.254 Sum_probs=73.2 Q ss_pred CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE Q ss_conf 68864866873299998889984998279986013431-12503423207877554236674438999951686-52798 Q gi|254780480|r 73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV 150 (367) Q Consensus 73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v 150 (367) -.+..+++|++..+++|.+.+.+|++..|.+.||||++ +.++.+.. ..||+||+|+|.+.+.|.+ -|+.+ T Consensus 55 a~ed~vI~p~~~~~I~TGi~i~iP~g~~~~i~~RSsl~~k~gl~~~~--------GvID~gYrGei~v~l~N~~~~~~~i 126 (167) T 3f4f_A 55 ASQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTGA--------GVVDRDYTGEVKVVLFNHSQRDFAI 126 (167) T ss_dssp CSSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEES--------CEECTTCCSCCEEEEEECSSSCEEE T ss_pred ECCCEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCCEEECC--------CEECCCCCEEEEEEEEECCCCCEEE T ss_conf 18788999998899978909987999789996566653214578154--------3175788306999999569944799 Q ss_pred ECCCEEEEEEEEE Q ss_conf 3398035689850 Q gi|254780480|r 151 RVGSRLSQIRFVK 163 (367) Q Consensus 151 ~~G~rl~Qi~f~~ 163 (367) .+|+||+||.|.. T Consensus 127 ~~GdRIaQlv~~~ 139 (167) T 3f4f_A 127 KKGDRVAQLILEK 139 (167) T ss_dssp CTTCEEEEEEEEE T ss_pred ECCCEEEEEEEEE T ss_conf 6899299999830 No 23 >3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolism; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* Probab=99.26 E-value=1.5e-11 Score=93.82 Aligned_cols=87 Identities=18% Similarity=0.298 Sum_probs=75.5 Q ss_pred CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC--CCEE Q ss_conf 68864866873299998889984998279986013431-12503423207877554236674438999951686--5279 Q gi|254780480|r 73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT--FPIV 149 (367) Q Consensus 73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s--fpI~ 149 (367) ..+..+|+|++.++++|-..+.+|++.+|.+.||||++ +.||.+...++ .||+||+|+|.+.+.|.+ -|+. T Consensus 51 a~ed~~I~P~~~~~I~TGi~i~ip~g~~g~I~~RSsl~~K~gl~v~ns~G------iID~dYrGei~v~l~N~~~~~~~~ 124 (174) T 3hza_A 51 SAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPG------TIDAGYRGEIKVALINLDPAAPIV 124 (174) T ss_dssp CSSCEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEETTSSE------EECTTCCSCCEEEEEECCSSCCEE T ss_pred CCCHHEECCCCEEEEECCEEEEECCCCCEEECCCCHHCCEECEEEECCCC------EECCCCCCCEEEEEEECCCCCCEE T ss_conf 07231609997599978849971788612141663130250779706675------706887774799999699996689 Q ss_pred EECCCEEEEEEEEECC Q ss_conf 8339803568985088 Q gi|254780480|r 150 VRVGSRLSQIRFVKER 165 (367) Q Consensus 150 v~~G~rl~Qi~f~~g~ 165 (367) +.+|+|||||.|.+-. T Consensus 125 I~~G~RIaQlv~~~~~ 140 (174) T 3hza_A 125 VHRGDRIAQLLVQRVE 140 (174) T ss_dssp ECTTCEEEEEEEEECC T ss_pred ECCCCCEEEEEECCCC T ss_conf 7389808999872358 No 24 >2d4n_A DU; jelly roll, hydrolase; HET: UPR; 1.53A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* Probab=99.26 E-value=3.3e-11 Score=91.60 Aligned_cols=82 Identities=17% Similarity=0.118 Sum_probs=69.6 Q ss_pred CCCEEECCC-CEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEC Q ss_conf 886486687-3299998889984998279986013431125034232078775542366744389999516865279833 Q gi|254780480|r 74 SGGTVLDAN-CVYIVPLMESLNLKNGISAYANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRTFPIVVRV 152 (367) Q Consensus 74 ~~g~vLepg-~~yLv~t~E~i~LP~di~a~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~sfpI~v~~ 152 (367) .+..++.|+ ..++++|...+.+|++.+|.+.||||+++-||++.. ..||+||.|+|.+.+.+.+-++.+.+ T Consensus 46 ~~d~~i~P~~~~~~i~tgi~~~iP~g~~g~I~~RSsl~~kgl~v~~--------GvID~gY~Gei~vl~n~~~~~~~I~~ 117 (152) T 2d4n_A 46 TSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITMKGLQVYP--------GVIDNDYTGEIKIMAKAVNNIVTVSQ 117 (152) T ss_dssp SSCEEECGGGCCEEEEEEEECCCCTTEEEEEECCHHHHHTTEEECC--------EEECTTCCSEEEEEEEECSSCEEECT T ss_pred CCCCEECCCCEEEEEEECEEEECCCCCEEEEEECCCCEEEEEEEEC--------CEECCCCCCCEEEEEECCCCCEEECC T ss_conf 8788887898058986074997799968999704652057877660--------45977998867998714899879879 Q ss_pred CCEEEEEEEEE Q ss_conf 98035689850 Q gi|254780480|r 153 GSRLSQIRFVK 163 (367) Q Consensus 153 G~rl~Qi~f~~ 163 (367) |+||+||.|.. T Consensus 118 G~RIaQlv~~p 128 (152) T 2d4n_A 118 GNRIAQLILLP 128 (152) T ss_dssp TCEEEEEEEEE T ss_pred CCEEEEEEEEE T ss_conf 99999999875 No 25 >3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A Probab=99.25 E-value=2.7e-11 Score=92.11 Aligned_cols=86 Identities=17% Similarity=0.220 Sum_probs=75.2 Q ss_pred CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE Q ss_conf 68864866873299998889984998279986013431-12503423207877554236674438999951686-52798 Q gi|254780480|r 73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV 150 (367) Q Consensus 73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v 150 (367) .++..++.||+.++++|.-.+.+|.+..+++.||||++ +-++.+...+ ..||+||.|+|.+-+.|.+ .|+.+ T Consensus 64 ~~~~v~i~Pge~~~I~TGi~i~iP~g~~g~I~~RSsla~K~gl~l~n~~------GIIDsdYrGEI~v~l~N~~~~~~~I 137 (178) T 3mdx_A 64 EDRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTP------GTIDSDYRGEVKVLLINLGDDDFRI 137 (178) T ss_dssp TTCCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEETTCS------EEECTTCCSEEEEEEEECSSSCEEE T ss_pred CCCCEEECCCCEEEEECCCEEECCCCCEEEEECCCCCCEEEEEEECCCC------CEECCCCCCEEEEEEEECCCCCEEE T ss_conf 7898798899889986892475599978899727850216079952355------4686777515799999798999798 Q ss_pred ECCCEEEEEEEEEC Q ss_conf 33980356898508 Q gi|254780480|r 151 RVGSRLSQIRFVKE 164 (367) Q Consensus 151 ~~G~rl~Qi~f~~g 164 (367) .+|+||+|++|..- T Consensus 138 ~~GdRIAQlv~~p~ 151 (178) T 3mdx_A 138 ERGMRIAQAVFAPV 151 (178) T ss_dssp CTTCEEEEEEEEEC T ss_pred CCCCEEEEEEEEEC T ss_conf 19998999998323 No 26 >3ehw_A DUTP pyrophosphatase; jelly-roll, FULL-length C-terminal ARM, enzyme-ligand complex, hydrolase; HET: DUP; 1.80A {Homo sapiens} SCOP: b.85.4.1 PDB: 2hqu_A* 1q5h_A* 1q5u_X Probab=99.22 E-value=4.8e-11 Score=90.50 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=74.1 Q ss_pred EECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCCC-CCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCE Q ss_conf 736886486687329999888998499827998601343112-503423207877554236674438999951686-527 Q gi|254780480|r 71 IDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGRI-DVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPI 148 (367) Q Consensus 71 idl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GRL-gif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI 148 (367) +-..+..+++|++.++++|-..+.+|.+..+++.||||++.- ++.+. + ..||+||.|+|.+-+.|.+ -++ T Consensus 50 l~~~ed~~I~p~~~~~I~Tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~--~------GvID~dYrGei~v~l~N~~~~~~ 121 (164) T 3ehw_A 50 LYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVG--A------GVIDEDYRGNVGVVLFNFGKEKF 121 (164) T ss_dssp EECSSCEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEE--C------CEECTTBCSCCEEEEEECSSSCE T ss_pred EEECCCEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCEEECC--C------EEECCCCCCEEEEEEEECCCCCC T ss_conf 981788899999879997897998589988999712567522309857--6------47887879738999996767765 Q ss_pred EEECCCEEEEEEEEEC Q ss_conf 9833980356898508 Q gi|254780480|r 149 VVRVGSRLSQIRFVKE 164 (367) Q Consensus 149 ~v~~G~rl~Qi~f~~g 164 (367) .+++|+||+||.|..- T Consensus 122 ~i~~G~RIaQlv~~~~ 137 (164) T 3ehw_A 122 EVKKGDRIAQLICERI 137 (164) T ss_dssp EECTTCEEEEEEEEEB T ss_pred EEECCCEEEEEEECCC T ss_conf 8604999999998355 No 27 >2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A Probab=99.20 E-value=1.3e-10 Score=87.63 Aligned_cols=84 Identities=19% Similarity=0.289 Sum_probs=74.1 Q ss_pred CCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEE Q ss_conf 688648668732999988899849982799860134311-2503423207877554236674438999951686-52798 Q gi|254780480|r 73 LSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVV 150 (367) Q Consensus 73 l~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v 150 (367) ..+..++.|++..+++|...+.+|++..+++.+|||++. .+|.+.. ..||+||.|+|.+-+.|.+ -|+.+ T Consensus 58 a~~d~~I~p~~~~~I~TGi~i~ip~g~~~~i~~RSsl~~k~gL~~~~--------GvID~dYrGeI~v~l~N~~~~~~~I 129 (169) T 2p9o_A 58 SAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGA--------GVIDADYRGPVGVILFNHSDADFEV 129 (169) T ss_dssp CSSCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEEEC--------CEEETTCCSCEEEEEEECSSSCEEE T ss_pred ECCCEEECCCCEEEEECCEEEECCCCEEEEEECCCCCCCCCCEEEEC--------CEECCCCCEEEEEEEEECCCCCEEC T ss_conf 05682999997699978959974888399994566675203517403--------1671467438899999899998785 Q ss_pred ECCCEEEEEEEEEC Q ss_conf 33980356898508 Q gi|254780480|r 151 RVGSRLSQIRFVKE 164 (367) Q Consensus 151 ~~G~rl~Qi~f~~g 164 (367) .+|+||+||.|.+- T Consensus 130 ~~G~RIaQlv~~~~ 143 (169) T 2p9o_A 130 KFGDRIAQLIIEKI 143 (169) T ss_dssp CTTCEEEEEEEEEE T ss_pred CCCCEEEEEEECCC T ss_conf 69997999998050 No 28 >2xcd_A Probable deoxyuridine 5'-triphosphate nucleotidoh YNCF; hydrolase; 1.84A {Bacillus subtilis} PDB: 2xce_A* 2baz_A Probab=99.19 E-value=2.5e-11 Score=92.34 Aligned_cols=85 Identities=21% Similarity=0.291 Sum_probs=72.2 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC-CCC-CCEEE Q ss_conf 8864866873299998889984998279986013431-12503423207877554236674438999951-686-52798 Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEIL-PRT-FPIVV 150 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~-~~s-fpI~v 150 (367) .+..+++||+..+++|-..+.+|++.+|.+.||||++ +.|+.+.-.+ ..||+||+|+|.+-+. |.+ -|+.+ T Consensus 31 ~ed~~I~pge~~~I~tGi~i~iP~g~~~~i~~RSsl~~K~gl~~~n~~------GvID~dYrGei~v~l~~n~~~~~~~I 104 (144) T 2xcd_A 31 AEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSM------GVIDESYKGDNDFWFFPAYALRDTEI 104 (144) T ss_dssp SSCEEECTTCEEEEEEEEEEECCTTEEEEEEECTTHHHHHCEEETTSS------EEEETTCCSTTCEEEEEEEESSCEEE T ss_pred CCCEEECCCCEEEEECCEEEECCCCCEEEEECCCHHHHHCCCCCCCCC------CEECCCCCCCCEEEEEECCCCCCEEE T ss_conf 889699999989997898998699979999724767742685266866------16717878874899876158988696 Q ss_pred ECCCEEEEEEEEEC Q ss_conf 33980356898508 Q gi|254780480|r 151 RVGSRLSQIRFVKE 164 (367) Q Consensus 151 ~~G~rl~Qi~f~~g 164 (367) .+|+||+||.|... T Consensus 105 ~~G~RIaQlv~~~~ 118 (144) T 2xcd_A 105 KKGDRICQFRIMKK 118 (144) T ss_dssp CTTCEEEEEEEEEC T ss_pred CCCCEEEEEEEECC T ss_conf 39997989998235 No 29 >3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans} Probab=99.18 E-value=6.8e-11 Score=89.51 Aligned_cols=84 Identities=21% Similarity=0.261 Sum_probs=71.9 Q ss_pred CCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC-CCCEEEEEECCCCCCCCCCCCC------CEEEEEEECCCC- Q ss_conf 88648668732999988899849982799860134311-2503423207877554236674------438999951686- Q gi|254780480|r 74 SGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR-IDVFARVIGDRSQEFDSISPNY------SGPLYLEILPRT- 145 (367) Q Consensus 74 ~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR-Lgif~r~i~~~~~~f~~id~Gy------~G~l~lEI~~~s- 145 (367) .+..+++|++..+++|.+.+.+|++.+|.+.||||+++ -++.+...+ ..||+|| .|+|.+.+.|.+ T Consensus 35 ~~~~~I~pg~~~~i~tg~~i~ip~g~~~~i~~RSsl~~K~gl~v~n~~------GvIDsdY~~~~~~rGei~v~l~N~~~ 108 (148) T 3h6x_A 35 AERTEISAGAIVLVPTGVKAYMQVGEVLYLFDRSSNPRKKGLVLINSV------GVIDGDYYNNPNNEGHIFAQMKNMTD 108 (148) T ss_dssp SSCEEECTTCEEEEECCEEEECCTTEEEEEEECTHHHHHHSEEETTSE------EEECTTTTTCTTTTTCCEEEEEECSS T ss_pred CCCEEECCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCC------CCCCCCCCCCCCCCEEEEEEEEECCC T ss_conf 889598999889997886203787317999825625532400254756------67967843688877799999997799 Q ss_pred CCEEEECCCEEEEEEEEE Q ss_conf 527983398035689850 Q gi|254780480|r 146 FPIVVRVGSRLSQIRFVK 163 (367) Q Consensus 146 fpI~v~~G~rl~Qi~f~~ 163 (367) -|+.+.+|+||+||.|.. T Consensus 109 ~~~~i~~G~RIaQlv~~p 126 (148) T 3h6x_A 109 QTVVLEAGERVVQGVFMP 126 (148) T ss_dssp SCEEECTTCEEEEEEEEE T ss_pred CCEEECCCCEEEEEEEEE T ss_conf 887975999798899865 No 30 >1vyq_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; drug design, dutpase, deoxyuridine nucleotidohydrolase, malaria; HET: DUX; 2.4A {Plasmodium falciparum} SCOP: b.85.4.1 Probab=99.15 E-value=3.7e-11 Score=91.26 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=90.7 Q ss_pred CCCEEEEEECCEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCEEEEECCCCCCC Q ss_conf 71225887589899981231578886211000240478873688648668732999988899849982799860134311 Q gi|254780480|r 32 QPASIDLRLSSKAYRVRASFLPNIDGLVSDKIKHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISAYANPKSSIGR 111 (367) Q Consensus 32 QPaSiDLRLG~~~~rv~asflp~~~~~v~~~l~~~~~~eidl~~g~vLepg~~yLv~t~E~i~LP~di~a~~~pKSS~GR 111 (367) +-|++||..-.... + .|+....+. + .+....+.+..+++.++...+...+.+....|.++.+++.||||+++ T Consensus 25 gdAG~DL~~~ed~v-I----~p~~~~~i~--t-gi~~i~i~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~pRSsl~k 96 (173) T 1vyq_A 25 GDSGLDLFIVKDEV-L----KPKSTTFVK--L-GIKAIALQYKSNYYYKCEKSENKKKDDDKSNIVNTSFLLFPRSSISK 96 (173) T ss_dssp -CCEEEECCCSCEE-E----CTTEEEEEE--E-EEEEEEEECCCCC------------------CEECCEEEEECGGGGG T ss_pred CEEEEEEECCCCEE-E----CCCCEEEEE--C-CCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHC T ss_conf 90859997186859-8----999899996--9-98748974375279986504454444333356771489976783540 Q ss_pred CCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEEEC Q ss_conf 2503423207877554236674438999951686-5279833980356898508 Q gi|254780480|r 112 IDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFVKE 164 (367) Q Consensus 112 Lgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~~g 164 (367) -+|.....+ ..||+||.|+|.+.+.|.+ .|+.+.+|+|||||.|..- T Consensus 97 ~gl~l~ns~------GiIDsgYrGei~v~l~N~~~~~~~I~~GdRIaQlv~~~~ 144 (173) T 1vyq_A 97 TPLRLANSI------GLIDAGYRGEIIAALDNTSDQEYHIKKNDKLVQLVSFTG 144 (173) T ss_dssp TTEEETTSS------EEECTTCCSEEEEEEEECSSSCEEECTTCCCEEEECTTC T ss_pred CCEEECCCC------CEECCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEEEC T ss_conf 866504621------154689984799999958999779679996999998254 No 31 >1dun_A Deoxyuridine 5'-triphosphate nucleoditohydrolase; dutpase, EIAV, trimeric enzyme, aspartyl protease; 1.90A {Equine infectious anemia virus} SCOP: b.85.4.1 PDB: 1duc_A Probab=99.15 E-value=2.3e-10 Score=86.10 Aligned_cols=96 Identities=17% Similarity=0.242 Sum_probs=74.4 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEE--EECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEEC--CCCCEEEEC Q ss_conf 39988997899986334442834016445--30433342134216045688665434566750478861--788889947 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMI--PYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVR--SSVPFVLEH 324 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~--~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr--~~~p~~l~~ 324 (367) .++|+|+++++..|.+++.+|+++++... ++.++-|. .+| +|.+||||.|.+. +++. ++.|+.++. T Consensus 26 d~~i~pg~~~~i~tg~~i~iP~~~~~~i~~RSsl~k~gl-~v~-~gvID~gy~G~l~--------v~l~N~~~~~~~i~~ 95 (134) T 1dun_A 26 DIMIPVSDTKIIPTDVKIQVPPNSFGWVTGKSSMAKQGL-LIN-GGIIDEGYTGEIQ--------VICTNIGKSNIKLIE 95 (134) T ss_dssp CEEECTTCEEEEECCCEEECCTTEEEEEECCHHHHHTTE-EEE-CCEEETTCCSCCE--------EEEEECSSSCEEECT T ss_pred CEEECCCCEEEEECCCEEECCCCEEEEEECCCHHCCCCC-CCC-CEEECCCCCCEEE--------EEEEECCCCCEEECC T ss_conf 989999998999887399768627999986663202783-124-3387688864699--------999989998779848 Q ss_pred CCEEEEEEEEECCCCCCCCCCC----CCCCCCCC Q ss_conf 9888999997637664222375----43472326 Q gi|254780480|r 325 GQIIGRLKYESMDGEPERLYGE----ARGSHYQS 354 (367) Q Consensus 325 g~~i~~l~~~~~~~~p~~~Yg~----~~~s~Yq~ 354 (367) |++||||+|+++..+....|.+ .+|+++.| T Consensus 96 G~rIaQlv~~~~~~~~~~~~~~~~~t~RG~~gFG 129 (134) T 1dun_A 96 GQKFAQLIILQHHSNSRQPWDENKISQRGDKGFG 129 (134) T ss_dssp TCEEEEEEEEECCCCCCCCCCTTCC--------- T ss_pred CCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCC T ss_conf 9969999997868666999155881616799797 No 32 >1f7d_A POL polyprotein; eight stranded beta-barrel, viral protein, hydrolase; 1.40A {Feline immunodeficiency virus} SCOP: b.85.4.1 PDB: 1f7k_A* 1f7n_A* 1f7o_A 1f7p_A* 1f7q_A* 1f7r_A* 1dut_A Probab=98.94 E-value=5.3e-09 Score=77.18 Aligned_cols=84 Identities=19% Similarity=0.188 Sum_probs=66.5 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCC Q ss_conf 3998899789998633444283401644--53043334213421604568866543456675047886178888994798 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQ 326 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~ 326 (367) .++|+|++.++..|.+++.+|+++++.. |++..+-| ..++ +|.+||||.|.+.. .|-+.++.|+.++.|+ T Consensus 25 ~~~i~P~~~~~i~Tg~~i~~p~~~~~~i~~RSsl~~~g-l~v~-~GvID~gY~Gei~v------~l~N~~~~~~~i~~G~ 96 (136) T 1f7d_A 25 EIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKG-LDVL-GGVIDEGYRGEIGV------IMINVSRKSITLMERQ 96 (136) T ss_dssp CEEECTTCEEEEECCCEECCCTTEEEEEECCHHHHTTT-EEEE-CCEECTTCCSCCEE------EEEECSSSCEEECTTC T ss_pred CEEECCCCEEEEECCEEEECCCCCEEEEECCCCHHCEE-EEEE-EEEECCCCCCEEEE------EEEECCCCCEEECCCC T ss_conf 88999998999978979985977599998267231204-7865-55788877766899------9999999988837999 Q ss_pred EEEEEEEEECCCCC Q ss_conf 88999997637664 Q gi|254780480|r 327 IIGRLKYESMDGEP 340 (367) Q Consensus 327 ~i~~l~~~~~~~~p 340 (367) +||||+|.+..... T Consensus 97 riaQlv~~~~~~~~ 110 (136) T 1f7d_A 97 KIAQLIILPCKHEV 110 (136) T ss_dssp EEEEEEEEECCCCC T ss_pred EEEEEEEECCCEEE T ss_conf 89999995157157 No 33 >2bsy_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; dutpase, monomer, nucleotide metabolism, structural proteomics in europe, spine; HET: UMP; 1.5A {Human herpesvirus 4} SCOP: b.85.4.1 b.85.4.1 PDB: 2bt1_A* 2we1_A* 2we0_A* 2we2_A* 2we3_A* Probab=98.94 E-value=7.5e-09 Score=76.20 Aligned_cols=123 Identities=10% Similarity=0.079 Sum_probs=88.4 Q ss_pred CCHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHH----HHCCCCEEEEEECCCCEEECCCCEEEEEEEEEEECCCCCEE Q ss_conf 98656571225887589899981231578886211----00024047887368864866873299998889984998279 Q gi|254780480|r 26 LEKNQIQPASIDLRLSSKAYRVRASFLPNIDGLVS----DKIKHFKLREIDLSGGTVLDANCVYIVPLMESLNLKNGISA 101 (367) Q Consensus 26 ~~~~QIQPaSiDLRLG~~~~rv~asflp~~~~~v~----~~l~~~~~~eidl~~g~vLepg~~yLv~t~E~i~LP~di~a 101 (367) -..-.|+|..+-++|--. .+ +.|....... .+-++-.-..+-..+..+++|++..+++|.-.+.+|.+.+| T Consensus 92 ~~~~~i~~G~l~~~l~~~--~~---~~P~~~~~~~~l~~P~~~~DAG~Dl~~~~d~~i~P~~~~~i~tgi~~~~p~~~~~ 166 (278) T 2bsy_A 92 RYNSTLRPSELKIHLAAF--RY---ATPQMEEDKGPINHPQYPGDVGLDVSLPKDLALFPHQTVSVTLTVPPPSIPHHRP 166 (278) T ss_dssp SSCEEECTTSCEEEEEEE--EE---ECCCC----CCBCCCSSTTCCCEEEECSSCEEECTTCEEEEEECSCCCCCTTEEE T ss_pred CCCEEECCCCEEEEEEEE--EE---CCCCEECCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEECCEEEECCCCEEE T ss_conf 987788698589999888--72---1671314756478998887621679958868999998899974869967998399 Q ss_pred EEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEECCCEEEEEEEEEC Q ss_conf 98601343112503423207877554236674438999951686-5279833980356898508 Q gi|254780480|r 102 YANPKSSIGRIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVRVGSRLSQIRFVKE 164 (367) Q Consensus 102 ~~~pKSS~GRLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~~G~rl~Qi~f~~g 164 (367) .+.||||++..|+.+.. ..||.|+|.+.+.|.+ -|+.+.+|+||+|+.|... T Consensus 167 ~I~~RSsla~kGl~v~~-----------~~~y~Gei~v~l~N~~~~~~~I~~G~RIAQlvf~~~ 219 (278) T 2bsy_A 167 TIFGRSGLAMQGILVKP-----------CRWRRGGVDVSLTNFSDQTVFLNKYRRFCQLVYLHK 219 (278) T ss_dssp EEECCHHHHHTTEEECC-----------EECBTTBEEEEEEECSSSCEEECTTCEEEEEEEEEG T ss_pred EEEECCCCCCCCEEEEC-----------CCEECCEEEEEEEECCCCCEEECCCCEEEEEEEEEC T ss_conf 99856502448989959-----------940355699999989898789789997999999513 No 34 >3f4f_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, UMP, product complex, DUTP pyrophosphatase, DITP; HET: UMP; 2.00A {Saccharomyces cerevisiae} PDB: 3hhq_A Probab=98.89 E-value=7e-08 Score=69.86 Aligned_cols=116 Identities=14% Similarity=0.187 Sum_probs=85.7 Q ss_pred EEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEE Q ss_conf 67888145545666630455126775130156555587786643113557775399889978999863344428340164 Q gi|254780480|r 196 ALSVDLKGNEIGKKSIIGYRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAE 275 (367) Q Consensus 196 ~~sVdL~~~~~~~~~iiGyrAkkht~~IDl~k~~~y~~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae 275 (367) .+-|.+.. .+..+=.||...+.=.|+--. ..++|+|++..+..|-+++.+|+++.+. T Consensus 28 ~lkv~~~~----~~A~lP~r~t~~dAG~DL~a~-------------------ed~vI~p~~~~~I~TGi~i~iP~g~~~~ 84 (167) T 3f4f_A 28 VLKIQLRS----ASATVPTKGSATAAGYDIYAS-------------------QDITIPAMGQGMVSTDISFTVPVGTYGR 84 (167) T ss_dssp EEEEEECS----TTCCCCEECSTTCSEEEEECS-------------------SCEEECTTEEEEEECCEEEECCTTEEEE T ss_pred EEEEEECC----CCCCCCCCCCCCCEEEEEEEC-------------------CCEEECCCCEEEEECCEEEECCCCCEEE T ss_conf 58999989----998888579998392786818-------------------7889999988999789099879997899 Q ss_pred EEEECCCC-CCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEEEEECCCCC Q ss_conf 45304333-421342160456886654345667504788617888899479888999997637664 Q gi|254780480|r 276 MIPYDHSI-GEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQIIGRLKYESMDGEP 340 (367) Q Consensus 276 ~~~~~~~~-g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i~~l~~~~~~~~p 340 (367) ..+.+... ..+....+|.+|+||.|.+. ..|...++.|+.|+.|++||||++.++...+ T Consensus 85 i~~RSsl~~k~gl~~~~GvID~gYrGei~------v~l~N~~~~~~~i~~GdRIaQlv~~~~~~~~ 144 (167) T 3f4f_A 85 IAPRSGLAVKNGIQTGAGVVDRDYTGEVK------VVLFNHSQRDFAIKKGDRVAQLILEKIVDDA 144 (167) T ss_dssp EECCHHHHHHHCEEEESCEECTTCCSCCE------EEEEECSSSCEEECTTCEEEEEEEEEBCCSC T ss_pred EECCCCCCCCCCEEECCCEECCCCCEEEE------EEEEECCCCCEEEECCCEEEEEEEEECCCCC T ss_conf 96566653214578154317578830699------9999569944799689929999983034774 No 35 >3p48_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; trimer, beta barrel, DUMPPNP pyrophosphatase, phosphoprotein, structural genomics; HET: DUP; 1.67A {Saccharomyces cerevisiae} Probab=98.87 E-value=1.8e-08 Score=73.69 Aligned_cols=87 Identities=14% Similarity=0.157 Sum_probs=70.7 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC-CCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 39988997899986334442834016445304333-42134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI-GEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~-g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) .++|.|++..+..|-.++.+|+++.+...|.+... ..+....+|.+|+||.|.+. ..|.+.++.||.++.|++ T Consensus 38 d~~i~p~~~~~I~tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~r 111 (147) T 3p48_A 38 DITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTGAGVVDRDYTGEVK------VVLFNHSQRDFAIKKGDR 111 (147) T ss_dssp CEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSCCE------EEEEECSSSCEEECTTCE T ss_pred CEEECCCCEEEEECCCEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEE------EEEEECCCCCEEEECCCE T ss_conf 97999997699977841007875168897356532010110576629978875259------999967992179948997 Q ss_pred EEEEEEEECCCCCC Q ss_conf 89999976376642 Q gi|254780480|r 328 IGRLKYESMDGEPE 341 (367) Q Consensus 328 i~~l~~~~~~~~p~ 341 (367) ||||+++++..+++ T Consensus 112 IaQlv~~~~~~~~~ 125 (147) T 3p48_A 112 VAQLILEKIVDDAQ 125 (147) T ss_dssp EEEEEEEEBCCSCE T ss_pred EEEEEEECCCCCCE T ss_conf 99999821437742 No 36 >1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A* Probab=98.86 E-value=1.4e-08 Score=74.50 Aligned_cols=85 Identities=20% Similarity=0.354 Sum_probs=71.2 Q ss_pred CCEEECCCCEEEEEEEEEEECC-CCCEEEEECCCCCC-CCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CCEEEE Q ss_conf 8648668732999988899849-98279986013431-12503423207877554236674438999951686-527983 Q gi|254780480|r 75 GGTVLDANCVYIVPLMESLNLK-NGISAYANPKSSIG-RIDVFARVIGDRSQEFDSISPNYSGPLYLEILPRT-FPIVVR 151 (367) Q Consensus 75 ~g~vLepg~~yLv~t~E~i~LP-~di~a~~~pKSS~G-RLgif~r~i~~~~~~f~~id~Gy~G~l~lEI~~~s-fpI~v~ 151 (367) +...+.|++..+++|-=.+.+| .+..+.+.||||++ +.++.....+ ..||+||.|+|.+-+.|.+ -++.+. T Consensus 39 ~~i~~~~~~~~~I~TGi~~~~p~~g~~~~i~~RSs~~~K~~l~~~n~~------GiID~dYrGei~v~l~N~~~~~~~I~ 112 (152) T 1euw_A 39 DAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLV------GLIDSDYQGQLMISVWNRGQDSFTIQ 112 (152) T ss_dssp SCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHCEEETTSS------EEECTTCCSEEEEEEEECSSSCEEEC T ss_pred CEEEECCCCEEEECCCEEEEECCCCCEEEEECCCCCCEECCEEECCCC------CCCCCCCCCCCEEEEEECCCCCEEEE T ss_conf 879869998699527638861689707999756774413346503545------65577778852899997899878982 Q ss_pred CCCEEEEEEEEECC Q ss_conf 39803568985088 Q gi|254780480|r 152 VGSRLSQIRFVKER 165 (367) Q Consensus 152 ~G~rl~Qi~f~~g~ 165 (367) +|+||+|+.|..-. T Consensus 113 ~GdRIAQlvi~~~~ 126 (152) T 1euw_A 113 PGERIAQMIFVPVV 126 (152) T ss_dssp TTCEEEEEEEEECC T ss_pred CCCEEEEEEEEECC T ss_conf 89979999951048 No 37 >3lqw_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; emerald biostructures, ALS collaborative crystallography; 1.30A {Entamoeba histolytica} Probab=98.84 E-value=3.3e-08 Score=72.01 Aligned_cols=84 Identities=21% Similarity=0.248 Sum_probs=70.5 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC-CCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 39988997899986334442834016445304333-42134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI-GEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~-g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) .++|+|++..+..|..++.+|+++.+.+.+.++.. ..+....+|.+||||.|.+. ..|-+.++.|+.++.|++ T Consensus 55 d~vI~P~~~~lI~TGi~i~iP~g~~~~i~~RSs~~~k~gl~~~~GvID~gYrGel~------v~l~N~~~~~~~I~~G~R 128 (163) T 3lqw_A 55 NFIIQPHERFLVSTGVSVQIPHQCYGRIAPRSSLALKYGIDVGAGVIDEDYRGEIK------VILFNHSNEIFNGRKGDR 128 (163) T ss_dssp CEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSEEE------EEEEECSSSCEEECTTCE T ss_pred CEEECCCCEEEEECCCEEECCCCCEEEEEECCCCCCCCCEEEECCEECCCCCEEEE------EEEEECCCCCEECCCCCE T ss_conf 98999998899978847865989789997126733014345115439468971999------999989998650458999 Q ss_pred EEEEEEEECCC Q ss_conf 89999976376 Q gi|254780480|r 328 IGRLKYESMDG 338 (367) Q Consensus 328 i~~l~~~~~~~ 338 (367) ||||++++... T Consensus 129 IaQlv~~~~~~ 139 (163) T 3lqw_A 129 IAQLIIERISY 139 (163) T ss_dssp EEEEEEEECCC T ss_pred EEEEEEEECCC T ss_conf 99998603173 No 38 >2ol1_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; fold, jelly-roll, superfamily, dutpase-like; HET: UMP; 1.80A {Vaccinia virus} PDB: 2oke_A* 2okd_A* 2ol0_A* 2okb_A Probab=98.82 E-value=3e-08 Score=72.30 Aligned_cols=86 Identities=14% Similarity=0.176 Sum_probs=68.1 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEE Q ss_conf 39988997899986334442834016445304333421342160456886654345667504788617888899479888 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQII 328 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i 328 (367) .++|+|++.++..|.+++.+|+++.+...+.++....+..--+|.+||||.|.+. ..|-+.++.|+.++.|++| T Consensus 39 d~~i~P~~~~~i~tgi~i~iP~g~~~~i~~RSsl~~kgl~v~~GvID~~YrGei~------v~l~N~~~~~~~i~~G~rI 112 (147) T 2ol1_A 39 DYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLKGIDIGGGVIDEDYRGNIG------VILINNGKCTFNVNTGDRI 112 (147) T ss_dssp CEEECTTEEEEEECCEEECCCTTEEEEEECCHHHHTTTEEEECCEECTTCCSCCE------EEEEECSSSCEEECTTCEE T ss_pred CEEECCCCEEEEECCCEEECCCCCCCEEECCCCCEEEEEEECCEEECCCCCCCEE------EEEEECCCCCEEECCCCEE T ss_conf 7499999989998998868898760117036765157899686669977786689------9999479977780499979 Q ss_pred EEEEEEECCCCC Q ss_conf 999997637664 Q gi|254780480|r 329 GRLKYESMDGEP 340 (367) Q Consensus 329 ~~l~~~~~~~~p 340 (367) |||+|++...+. T Consensus 113 aQlv~~~~~~~~ 124 (147) T 2ol1_A 113 AQLIYQRIYYPE 124 (147) T ss_dssp EEEEEEEEECCC T ss_pred EEEEEECCCCEE T ss_conf 999983366506 No 39 >3ecy_A CG4584-PA, isoform A (bcDNA.LD08534); jelly-roll, dimeric assembly, hydrolase; 1.88A {Drosophila melanogaster} Probab=98.80 E-value=6.4e-08 Score=70.12 Aligned_cols=84 Identities=21% Similarity=0.219 Sum_probs=68.3 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 3998899789998633444283401644530433342-134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) .++|+|++..+..|-.++.+|+++.+...+.++..-- +....+|.+|+||.|.+. ..|.+-++.|+.++.|++ T Consensus 51 d~~i~p~~~~~i~Tgi~v~iP~g~~~~I~~RSsl~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~R 124 (160) T 3ecy_A 51 DVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVGAGVVDEDYRGNLG------VVLFNHSDVDFEVKHGDR 124 (160) T ss_dssp CEEECTTCEEEEECCEEEECCTTCEEEEECC-------CEEEECEEECTTCCSCCE------EEEEECSSSCEEECTTCE T ss_pred CEEECCCCEEEEECCCEEECCCCEEEEEECCCCCEEECCEECCCCCCCCCCCCCCC------EEEEECCCCCEECCCCCE T ss_conf 67999996699978975718999699997354050427700577743624255461------999989998701589998 Q ss_pred EEEEEEEECCC Q ss_conf 89999976376 Q gi|254780480|r 328 IGRLKYESMDG 338 (367) Q Consensus 328 i~~l~~~~~~~ 338 (367) ||||++++... T Consensus 125 IaQlv~~~~~~ 135 (160) T 3ecy_A 125 IAQFICERIFY 135 (160) T ss_dssp EEEEEEEEEEC T ss_pred EEEEEECCCCC T ss_conf 99999853485 No 40 >3c2t_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} PDB: 3c3i_A* Probab=98.75 E-value=8.4e-08 Score=69.32 Aligned_cols=86 Identities=13% Similarity=0.149 Sum_probs=69.0 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 3998899789998633444283401644530433342-134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) .++|+|++.++..|-+++.+|+++.+...+.+...-- +...-+|.+||||.|.+.. .|-+.++.|+.++.|++ T Consensus 33 ~~~i~p~~~~~i~tgi~~~ip~g~~g~i~~RSsl~~k~gL~~~~GvID~gYrGei~v------~l~N~~~~~~~i~~G~R 106 (141) T 3c2t_A 33 DVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDEDYTGEVKV------ILYNTTERDYIIKKGDR 106 (141) T ss_dssp CEEECTTCEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSCCEE------EEEECSSSCEEECTTCE T ss_pred CCEECCCCEEEEECCCEEECCCEEEEEEEECCCCEEECCEEEECEEECCCCCCEEEE------EEEECCCCCEEECCCCE T ss_conf 539788715999658434078604668980667822389797453797888828999------99989999777108999 Q ss_pred EEEEEEEECCCCC Q ss_conf 8999997637664 Q gi|254780480|r 328 IGRLKYESMDGEP 340 (367) Q Consensus 328 i~~l~~~~~~~~p 340 (367) ||||++++...+. T Consensus 107 IaQlv~~~~~~~~ 119 (141) T 3c2t_A 107 IAQLILEQIVTPG 119 (141) T ss_dssp EEEEEEEECCCCC T ss_pred EEEEEECCCCCEE T ss_conf 9999963657215 No 41 >2xcd_A Probable deoxyuridine 5'-triphosphate nucleotidoh YNCF; hydrolase; 1.84A {Bacillus subtilis} PDB: 2xce_A* 2baz_A Probab=98.75 E-value=7.8e-08 Score=69.55 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=71.7 Q ss_pred HHHHCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC---CCEEEE-CCEEECCCCCCCCCCCCCCEEEE Q ss_conf 64311355777539988997899986334442834016445304333---421342-16045688665434566750478 Q gi|254780480|r 237 WDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI---GEFRVH-YAGFFDPGFGCVLPQEVGAKAVL 312 (367) Q Consensus 237 we~i~~~~~~~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~---g~~r~h-~AGf~DpGf~~~~~~~~~~~~vL 312 (367) |-.+++. ..++|+|++..+..|-.++.+|+++.+.+.|.++.. | .+++ .+|.+|+||.|.+. .+| T Consensus 25 g~DL~a~----ed~~I~pge~~~I~tGi~i~iP~g~~~~i~~RSsl~~K~g-l~~~n~~GvID~dYrGei~------v~l 93 (144) T 2xcd_A 25 WIDLRAA----EDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFG-VIQTNSMGVIDESYKGDND------FWF 93 (144) T ss_dssp CEEEECS----SCEEECTTCEEEEEEEEEEECCTTEEEEEEECTTHHHHHC-EEETTSSEEEETTCCSTTC------EEE T ss_pred EEEEECC----CCEEECCCCEEEEECCEEEECCCCCEEEEECCCHHHHHCC-CCCCCCCCEECCCCCCCCE------EEE T ss_conf 1878258----8969999998999789899869997999972476774268-5266866167178788748------998 Q ss_pred E-ECCCCCEEEECCCEEEEEEEEECCC Q ss_conf 8-6178888994798889999976376 Q gi|254780480|r 313 E-VRSSVPFVLEHGQIIGRLKYESMDG 338 (367) Q Consensus 313 e-vr~~~p~~l~~g~~i~~l~~~~~~~ 338 (367) - +.++.|+.++.|++||||++.+... T Consensus 94 ~~n~~~~~~~I~~G~RIaQlv~~~~~~ 120 (144) T 2xcd_A 94 FPAYALRDTEIKKGDRICQFRIMKKMP 120 (144) T ss_dssp EEEEESSCEEECTTCEEEEEEEEECCC T ss_pred EECCCCCCEEECCCCEEEEEEEECCCC T ss_conf 761589886963999798999823526 No 42 >3ca9_A Deoxyuridine triphosphatase; dutpase chlorella virus, hydrolase; HET: DUD; 3.00A {Paramecium bursaria chlorella VIRUSIL3A} Probab=98.73 E-value=1e-07 Score=68.80 Aligned_cols=85 Identities=13% Similarity=0.164 Sum_probs=68.8 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 3998899789998633444283401644530433342-134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) .++|+|++..+..|-..+.+|+++.+...+.+...-- +..-.+|.+|+||.|.+. ..|.+.++.|+.++.|+| T Consensus 49 d~~I~p~~~~~i~Tgi~i~ip~g~~~~I~~RSsl~~k~gl~~~~GvID~gYrGeI~------v~l~N~~~~~~~I~~G~R 122 (165) T 3ca9_A 49 DVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLAGVIDEDYTGEVK------VILYNTTERDYIIKKGDR 122 (165) T ss_dssp CEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEECCCEECTTCCSCCE------EEEEECSSSCEEECTTCE T ss_pred HHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEECCEEEECCEECCCCCCEEE------EEEEECCCCCEEEECCCE T ss_conf 21139996599978961217860788998566563018878623268666772789------999979999866208999 Q ss_pred EEEEEEEECCCC Q ss_conf 899999763766 Q gi|254780480|r 328 IGRLKYESMDGE 339 (367) Q Consensus 328 i~~l~~~~~~~~ 339 (367) ||||++.+...+ T Consensus 123 IaQlv~~~~~~~ 134 (165) T 3ca9_A 123 IAQLILEQIVTP 134 (165) T ss_dssp EEEEEEEECCCC T ss_pred EEEEEECCCCCE T ss_conf 999997465713 No 43 >3h6x_A Dutpase; jelly-roll beta-barrel, hydrolase; 1.70A {Streptococcus mutans} Probab=98.72 E-value=1.7e-07 Score=67.39 Aligned_cols=90 Identities=10% Similarity=0.002 Sum_probs=69.3 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCC--CCEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECC Q ss_conf 39988997899986334442834016445304333--421342-160456886654345667504788617888899479 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSI--GEFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHG 325 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~--g~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g 325 (367) ..+|+|++..+..|-+++.+|+++++...|.+... .-+++. .+|.+|+||.+.....---...|.+.++.|+.++.| T Consensus 37 ~~~I~pg~~~~i~tg~~i~ip~g~~~~i~~RSsl~~K~gl~v~n~~GvIDsdY~~~~~~rGei~v~l~N~~~~~~~i~~G 116 (148) T 3h6x_A 37 RTEISAGAIVLVPTGVKAYMQVGEVLYLFDRSSNPRKKGLVLINSVGVIDGDYYNNPNNEGHIFAQMKNMTDQTVVLEAG 116 (148) T ss_dssp CEEECTTCEEEEECCEEEECCTTEEEEEEECTHHHHHHSEEETTSEEEECTTTTTCTTTTTCCEEEEEECSSSCEEECTT T ss_pred CEEECCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCC T ss_conf 95989998899978862037873179998256255324002547566796784368887779999999779988797599 Q ss_pred CEEEEEEEEECCC Q ss_conf 8889999976376 Q gi|254780480|r 326 QIIGRLKYESMDG 338 (367) Q Consensus 326 ~~i~~l~~~~~~~ 338 (367) +|||||+|.+... T Consensus 117 ~RIaQlv~~p~~~ 129 (148) T 3h6x_A 117 ERVVQGVFMPFLL 129 (148) T ss_dssp CEEEEEEEEECBC T ss_pred CEEEEEEEEEEEE T ss_conf 9798899865788 No 44 >3hza_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, domain swapping, nucleotide metabolism; HET: DUP; 1.20A {Mycobacterium tuberculosis} PDB: 1six_A* 1slh_A* 1sm8_A* 1smc_A* 1snf_A* 2py4_A* 3h6d_A* 3i93_A* 1mq7_A 1sjn_A* Probab=98.71 E-value=1.2e-07 Score=68.40 Aligned_cols=86 Identities=19% Similarity=0.261 Sum_probs=68.0 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCC---CCCEEEECCEEECCCCCCCCCCCCCCEEEEEECC-CCCEEEEC Q ss_conf 3998899789998633444283401644530433---3421342160456886654345667504788617-88889947 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHS---IGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRS-SVPFVLEH 324 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~---~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~-~~p~~l~~ 324 (367) ..+|.|++.++..|-..+.+|+++.+...+.+.. .|...+..+|.+|+||.|.+.. .|-.-+ +.|+.++. T Consensus 54 d~~I~P~~~~~I~TGi~i~ip~g~~g~I~~RSsl~~K~gl~v~ns~GiID~dYrGei~v------~l~N~~~~~~~~I~~ 127 (174) T 3hza_A 54 DVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKV------ALINLDPAAPIVVHR 127 (174) T ss_dssp CEEECTTCEEEEECSEEEECCTTEEEEEECCHHHHHHHCEEETTSSEEECTTCCSCCEE------EEEECCSSCCEEECT T ss_pred HHEECCCCEEEEECCEEEEECCCCCEEECCCCHHCCEECEEEECCCCEECCCCCCCEEE------EEEECCCCCCEEECC T ss_conf 31609997599978849971788612141663130250779706675706887774799------999699996689738 Q ss_pred CCEEEEEEEEECCCCC Q ss_conf 9888999997637664 Q gi|254780480|r 325 GQIIGRLKYESMDGEP 340 (367) Q Consensus 325 g~~i~~l~~~~~~~~p 340 (367) |++||||++.+..... T Consensus 128 G~RIaQlv~~~~~~~~ 143 (174) T 3hza_A 128 GDRIAQLLVQRVELVE 143 (174) T ss_dssp TCEEEEEEEEECCCCC T ss_pred CCCEEEEEECCCCCCE T ss_conf 9808999872358633 No 45 >3mdx_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; metal-binding, nucleotide metabolism, structural genomics; 1.45A {Brucella melitensis} PDB: 3mbq_A Probab=98.67 E-value=2.7e-07 Score=66.05 Aligned_cols=86 Identities=15% Similarity=0.203 Sum_probs=69.9 Q ss_pred CCEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCC--CEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEE Q ss_conf 75399889978999863344428340164453043334--21342-1604568866543456675047886178888994 Q gi|254780480|r 247 EGQFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIG--EFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLE 323 (367) Q Consensus 247 ~~~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g--~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~ 323 (367) +..++|.|++.++..|--++.+|+++.+.+.+.+...- -.++. .+|.+|+||.|.+. ..|.+.++.|+.++ T Consensus 65 ~~~v~i~Pge~~~I~TGi~i~iP~g~~g~I~~RSsla~K~gl~l~n~~GIIDsdYrGEI~------v~l~N~~~~~~~I~ 138 (178) T 3mdx_A 65 DRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTPGTIDSDYRGEVK------VLLINLGDDDFRIE 138 (178) T ss_dssp TCCEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEETTCSEEECTTCCSEEE------EEEEECSSSCEEEC T ss_pred CCCEEECCCCEEEEECCCEEECCCCCEEEEECCCCCCEEEEEEECCCCCEECCCCCCEEE------EEEEECCCCCEEEC T ss_conf 898798899889986892475599978899727850216079952355468677751579------99997989997981 Q ss_pred CCCEEEEEEEEECCC Q ss_conf 798889999976376 Q gi|254780480|r 324 HGQIIGRLKYESMDG 338 (367) Q Consensus 324 ~g~~i~~l~~~~~~~ 338 (367) .|+|||||++.+... T Consensus 139 ~GdRIAQlv~~p~~~ 153 (178) T 3mdx_A 139 RGMRIAQAVFAPVIQ 153 (178) T ss_dssp TTCEEEEEEEEECCC T ss_pred CCCEEEEEEEEECCC T ss_conf 999899999832376 No 46 >3ehw_A DUTP pyrophosphatase; jelly-roll, FULL-length C-terminal ARM, enzyme-ligand complex, hydrolase; HET: DUP; 1.80A {Homo sapiens} SCOP: b.85.4.1 PDB: 2hqu_A* 1q5h_A* 1q5u_X Probab=98.66 E-value=2.1e-07 Score=66.77 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=68.8 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCC-CEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 399889978999863344428340164453043334-2134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIG-EFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g-~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) .++|+|++..+..|-.++.+|.++.+.+.+.+...- .+....+|.+|+||.|.+. ..|.+-++.|+.++.|++ T Consensus 55 d~~I~p~~~~~I~Tgi~i~iP~g~~~~i~~RSsl~~k~~l~~~~GvID~dYrGei~------v~l~N~~~~~~~i~~G~R 128 (164) T 3ehw_A 55 DYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVG------VVLFNFGKEKFEVKKGDR 128 (164) T ss_dssp CEEECTTEEEEEECCEEEECCTTEEEEEECCHHHHHHHCEEEECCEECTTBCSCCE------EEEEECSSSCEEECTTCE T ss_pred CEEECCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCEEECCCEEECCCCCCEEE------EEEEECCCCCCEEECCCE T ss_conf 88999998799978979985899889997125675223098576478878797389------999967677658604999 Q ss_pred EEEEEEEECCCC Q ss_conf 899999763766 Q gi|254780480|r 328 IGRLKYESMDGE 339 (367) Q Consensus 328 i~~l~~~~~~~~ 339 (367) ||||++.+...+ T Consensus 129 IaQlv~~~~~~~ 140 (164) T 3ehw_A 129 IAQLICERIFYP 140 (164) T ss_dssp EEEEEEEEBCCC T ss_pred EEEEEECCCCCE T ss_conf 999998355642 No 47 >2d4n_A DU; jelly roll, hydrolase; HET: UPR; 1.53A {Mason-pfizer monkey virus} PDB: 2d4m_A 2d4l_A* Probab=98.46 E-value=1e-06 Score=62.29 Aligned_cols=85 Identities=13% Similarity=0.224 Sum_probs=63.3 Q ss_pred EEEECCC-CEEEEEEEEEEECCCCCEEEEE--EECCCCCCEEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECC Q ss_conf 3998899-7899986334442834016445--304333421342160456886654345667504788617888899479 Q gi|254780480|r 249 QFILDPN-EFYIFASREFIQIPPSLVAEMI--PYDHSIGEFRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHG 325 (367) Q Consensus 249 ~~~l~p~-~F~l~~s~E~v~iP~~~aae~~--~~~~~~g~~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g 325 (367) ..+|.|+ ..++..|...+.+|+++.+... ++.++-| ....+|.+|+||.|.+. +|-..++.|+.++.| T Consensus 48 d~~i~P~~~~~~i~tgi~~~iP~g~~g~I~~RSsl~~kg--l~v~~GvID~gY~Gei~-------vl~n~~~~~~~I~~G 118 (152) T 2d4n_A 48 HTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITMKG--LQVYPGVIDNDYTGEIK-------IMAKAVNNIVTVSQG 118 (152) T ss_dssp CEEECGGGCCEEEEEEEECCCCTTEEEEEECCHHHHHTT--EEECCEEECTTCCSEEE-------EEEEECSSCEEECTT T ss_pred CCEECCCCEEEEEEECEEEECCCCCEEEEEECCCCEEEE--EEEECCEECCCCCCCEE-------EEEECCCCCEEECCC T ss_conf 888878980589860749977999689997046520578--77660459779988679-------987148998798799 Q ss_pred CEEEEEEEEECCCCCCC Q ss_conf 88899999763766422 Q gi|254780480|r 326 QIIGRLKYESMDGEPER 342 (367) Q Consensus 326 ~~i~~l~~~~~~~~p~~ 342 (367) ++||||+|.++.+..+. T Consensus 119 ~RIaQlv~~p~~~~~~~ 135 (152) T 2d4n_A 119 NRIAQLILLPLIETDNK 135 (152) T ss_dssp CEEEEEEEEECCCCCCC T ss_pred CEEEEEEEEEEEEECCC T ss_conf 99999998757897041 No 48 >2p9o_A DUTP pyrophosphatase-like protein; dutpase, magnesium binding, hydrolase; 2.00A {Arabidopsis thaliana} PDB: 2pc5_A Probab=98.45 E-value=1.7e-06 Score=60.86 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=68.5 Q ss_pred EEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCC-EEEECCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCE Q ss_conf 3998899789998633444283401644530433342-134216045688665434566750478861788889947988 Q gi|254780480|r 249 QFILDPNEFYIFASREFIQIPPSLVAEMIPYDHSIGE-FRVHYAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQI 327 (367) Q Consensus 249 ~~~l~p~~F~l~~s~E~v~iP~~~aae~~~~~~~~g~-~r~h~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~ 327 (367) ..+|.|++..+..|-.++.+|+++.+.+.+.+...-- .....+|.+|+||.|.+. ..|.+.++.|+.++.|++ T Consensus 61 d~~I~p~~~~~I~TGi~i~ip~g~~~~i~~RSsl~~k~gL~~~~GvID~dYrGeI~------v~l~N~~~~~~~I~~G~R 134 (169) T 2p9o_A 61 DSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVG------VILFNHSDADFEVKFGDR 134 (169) T ss_dssp CEEECTTCEEEEEEEEEEECCTTEEEEEECCHHHHHHHCEEEECCEEETTCCSCEE------EEEEECSSSCEEECTTCE T ss_pred CEEECCCCEEEEECCEEEECCCCEEEEEECCCCCCCCCCEEEECCEECCCCCEEEE------EEEEECCCCCEECCCCCE T ss_conf 82999997699978959974888399994566675203517403167146743889------999989999878569997 Q ss_pred EEEEEEEECCCCC Q ss_conf 8999997637664 Q gi|254780480|r 328 IGRLKYESMDGEP 340 (367) Q Consensus 328 i~~l~~~~~~~~p 340 (367) ||||++.+..... T Consensus 135 IaQlv~~~~~~~~ 147 (169) T 2p9o_A 135 IAQLIIEKIVTPD 147 (169) T ss_dssp EEEEEEEEEECCC T ss_pred EEEEEECCCCEEE T ss_conf 9999980502176 No 49 >1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A* Probab=98.24 E-value=1.3e-05 Score=55.02 Aligned_cols=88 Identities=19% Similarity=0.273 Sum_probs=69.2 Q ss_pred CCEEEECCCCEEEEEEEEEEECC-CCCEEEEEEECCCC--CCEEEE-CCEEECCCCCCCCCCCCCCEEEEEECCCCCEEE Q ss_conf 75399889978999863344428-34016445304333--421342-160456886654345667504788617888899 Q gi|254780480|r 247 EGQFILDPNEFYIFASREFIQIP-PSLVAEMIPYDHSI--GEFRVH-YAGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVL 322 (367) Q Consensus 247 ~~~~~l~p~~F~l~~s~E~v~iP-~~~aae~~~~~~~~--g~~r~h-~AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l 322 (367) ++.+.+.|++..+..|-=.+.+| +++.+...|.++.. +-+... -+|.+|+||.|.+ ...|-+.++.|+.+ T Consensus 38 ~~~i~~~~~~~~~I~TGi~~~~p~~g~~~~i~~RSs~~~K~~l~~~n~~GiID~dYrGei------~v~l~N~~~~~~~I 111 (152) T 1euw_A 38 NDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQL------MISVWNRGQDSFTI 111 (152) T ss_dssp SSCEEECTTCEEEEEEEEEEECCCTTEEEEEEECHHHHHHHCEEETTSSEEECTTCCSEE------EEEEEECSSSCEEE T ss_pred CCEEEECCCCEEEECCCEEEEECCCCCEEEEECCCCCCEECCEEECCCCCCCCCCCCCCC------EEEEEECCCCCEEE T ss_conf 987986999869952763886168970799975677441334650354565577778852------89999789987898 Q ss_pred ECCCEEEEEEEEECCCCC Q ss_conf 479888999997637664 Q gi|254780480|r 323 EHGQIIGRLKYESMDGEP 340 (367) Q Consensus 323 ~~g~~i~~l~~~~~~~~p 340 (367) +.|+|||||++.+..... T Consensus 112 ~~GdRIAQlvi~~~~~~~ 129 (152) T 1euw_A 112 QPGERIAQMIFVPVVQAE 129 (152) T ss_dssp CTTCEEEEEEEEECCCCC T ss_pred ECCCEEEEEEEEECCCCE T ss_conf 289979999951048546 No 50 >1vyq_A Deoxyuridine 5'-triphosphate nucleotidohydrolase; drug design, dutpase, deoxyuridine nucleotidohydrolase, malaria; HET: DUX; 2.4A {Plasmodium falciparum} SCOP: b.85.4.1 Probab=97.87 E-value=5.9e-05 Score=50.75 Aligned_cols=79 Identities=10% Similarity=0.013 Sum_probs=52.9 Q ss_pred ECCCCEEEEEEEEEEECCCCCEEEE--EEECCCCCCEEEEC-CEEECCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEE Q ss_conf 8899789998633444283401644--53043334213421-60456886654345667504788617888899479888 Q gi|254780480|r 252 LDPNEFYIFASREFIQIPPSLVAEM--IPYDHSIGEFRVHY-AGFFDPGFGCVLPQEVGAKAVLEVRSSVPFVLEHGQII 328 (367) Q Consensus 252 l~p~~F~l~~s~E~v~iP~~~aae~--~~~~~~~g~~r~h~-AGf~DpGf~~~~~~~~~~~~vLevr~~~p~~l~~g~~i 328 (367) +.+.......+.+....|.++++-. ||+...-| .++++ .|.+|+||.|.+. +.|-..++.|+.++.|+|| T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~i~pRSsl~k~g-l~l~ns~GiIDsgYrGei~------v~l~N~~~~~~~I~~GdRI 136 (173) T 1vyq_A 64 YKCEKSENKKKDDDKSNIVNTSFLLFPRSSISKTP-LRLANSIGLIDAGYRGEII------AALDNTSDQEYHIKKNDKL 136 (173) T ss_dssp -----------------CEECCEEEEECGGGGGTT-EEETTSSEEECTTCCSEEE------EEEEECSSSCEEECTTCCC T ss_pred EEEEECCCCCCCCCCCCCCCCEEEEECCCCHHCCC-EEECCCCCEECCCCCCEEE------EEEEECCCCCEEECCCCEE T ss_conf 98650445444433335677148997678354086-6504621154689984799------9999589997796799969 Q ss_pred EEEEEEECC Q ss_conf 999997637 Q gi|254780480|r 329 GRLKYESMD 337 (367) Q Consensus 329 ~~l~~~~~~ 337 (367) |||++.+.. T Consensus 137 aQlv~~~~~ 145 (173) T 1vyq_A 137 VQLVSFTGE 145 (173) T ss_dssp EEEECTTCC T ss_pred EEEEEEECC T ss_conf 999982548 No 51 >1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A* Probab=52.23 E-value=9.4 Score=16.78 Aligned_cols=36 Identities=8% Similarity=0.176 Sum_probs=18.5 Q ss_pred EECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC Q ss_conf 947988899999763766422237543472326667 Q gi|254780480|r 322 LEHGQIIGRLKYESMDGEPERLYGEARGSHYQSQAL 357 (367) Q Consensus 322 l~~g~~i~~l~~~~~~~~p~~~Yg~~~~s~Yq~Qgl 357 (367) ..+|+.||.+.|.+.+...-..+-......|+|||+ T Consensus 17 ~~~g~~vg~i~~~~~~~~~~~i~~~~V~p~~rG~Gi 52 (102) T 1r57_A 17 DDENNALAEITYRFVDNNEINIDHTGVSDELGGQGV 52 (102) T ss_dssp SSSTTEEEEEEEEESSSSEEEEEEEEECCSSSTTCT T ss_pred EECCEEEEEEEEEECCCCEEEEEEEEECHHHCCCHH T ss_conf 989979999999993799999999999979949849 No 52 >2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12 Probab=39.75 E-value=9.1 Score=16.88 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=23.0 Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEEC Q ss_conf 58778664311355777539988997899986334442 Q gi|254780480|r 231 YDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQI 268 (367) Q Consensus 231 y~~~dfwe~i~~~~~~~~~~~l~p~~F~l~~s~E~v~i 268 (367) +.--+||+++..+ .+|.-+|.+||..|+ +++.|.+ T Consensus 6 ~~~m~~w~~~~~T--~sg~P~L~~~E~~l~-~q~~V~L 40 (145) T 2cay_A 6 HHHMEYWHYVETT--SSGQPLLREGEKDIF-IDQSVGL 40 (145) T ss_dssp -CGGGTCEECCBC--TTSCBCCCTTCCEEE-EEEEEEE T ss_pred HHHHHHHCCEEEC--CCCCEEECCCEEEEE-EECCEEE T ss_conf 4567640110122--699778519938999-8278788 No 53 >3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis} Probab=32.71 E-value=7.6 Score=17.38 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=47.1 Q ss_pred ECCCCCCCCHHHHHHHHCCCCCCCCEEEE----CCCCEEEEEEEEEEECCCCCEEEEEEECCC---CCCEEEECCEEECC Q ss_conf 01565555877866431135577753998----899789998633444283401644530433---34213421604568 Q gi|254780480|r 224 DVDSENKYDESDFWDPLFSWDAPEGQFIL----DPNEFYIFASREFIQIPPSLVAEMIPYDHS---IGEFRVHYAGFFDP 296 (367) Q Consensus 224 Dl~k~~~y~~~dfwe~i~~~~~~~~~~~l----~p~~F~l~~s~E~v~iP~~~aae~~~~~~~---~g~~r~h~AGf~Dp 296 (367) ++.+....+++++-+-.... ...+. -||-=||.--.+...+|.--.--.+-=.+. .|.+-.-|.-= -| T Consensus 118 ~vA~~~gLs~~evI~~H~~~----~y~V~~iGF~PGfpYL~gld~~l~~PR~~~PR~~vPaGSVgIag~qt~IYP~~-sP 192 (228) T 3mml_B 118 EVASLTGMTPAQVIAAHTGT----PWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQ-SP 192 (228) T ss_dssp HHHHHHTSCHHHHHHHHHHS----CEEEEEECSSTTCEEEESSCGGGCBCCCSSCEEEECTTEEEEEBTEEEECSSS-EE T ss_pred HHHHHHCCCHHHHHHHHHCC----CEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCC-CC T ss_conf 99999594978999887477----61899987637631313687234465557864447898289867547998589-99 Q ss_pred CCCCCCCCCCCCE-EEEEE-CCCCCEEEECCCEEEEEEEEE Q ss_conf 8665434566750-47886-178888994798889999976 Q gi|254780480|r 297 GFGCVLPQEVGAK-AVLEV-RSSVPFVLEHGQIIGRLKYES 335 (367) Q Consensus 297 Gf~~~~~~~~~~~-~vLev-r~~~p~~l~~g~~i~~l~~~~ 335 (367) | |+++- |.. ..|-- ..+-|++|.+|.+| .|++ T Consensus 193 G-GW~iI---GrTp~~lfd~~~~~P~ll~~GD~V---rF~~ 226 (228) T 3mml_B 193 G-GWQLI---GHTDAVMFDVNRDKPALLTPGMWV---QFRA 226 (228) T ss_dssp E-CSEEE---EEECSCSBCTTSSSSBSCCTTCEE---EEEE T ss_pred C-CCEEE---CCCCCCCCCCCCCCCCCCCCCCEE---EEEE T ss_conf 7-53486---615711018899997236999989---9997 No 54 >2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9 Probab=32.60 E-value=17 Score=15.09 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=27.0 Q ss_pred CCCCCCCHHHHHHHHHCCCEEECCCCCHHHCC Q ss_conf 98761586899999987984981789865657 Q gi|254780480|r 1 MNKGVLPDKAIATLAERGDIVSEHPLEKNQIQ 32 (367) Q Consensus 1 ~~~GILsd~~I~~li~~g~I~i~~p~~~~QIQ 32 (367) |.+++||+.+|+..-++|.+++..-+++++|. T Consensus 18 ~~~~~Lt~eq~~~f~~dGyvvl~n~l~~~~i~ 49 (308) T 2a1x_A 18 LDNNVLTLEQRKFYEENGFLVIKNLVPDADIQ 49 (308) T ss_dssp CCC--CCSTHHHHHHHHSEEEETTCSCHHHHH T ss_pred CCCCCCCHHHHHHHHHCCEEEECCCCCHHHHH T ss_conf 47898999999999879899815847999999 No 55 >2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain, 2-dimethylmenaquinone methyltransferase; 1.90A {Geobacillus kaustophilus HTA426} Probab=24.33 E-value=29 Score=13.58 Aligned_cols=28 Identities=14% Similarity=0.279 Sum_probs=25.1 Q ss_pred CEEEECCCCEEEEEEEEEEECCCCCEEE Q ss_conf 5399889978999863344428340164 Q gi|254780480|r 248 GQFILDPNEFYIFASREFIQIPPSLVAE 275 (367) Q Consensus 248 ~~~~l~p~~F~l~~s~E~v~iP~~~aae 275 (367) +...++||.+.++...=.|-||.++++| T Consensus 132 gGv~V~pGD~I~aD~dGVvviP~~l~~e 159 (161) T 2pcn_A 132 GGVRWEPGAYVYADADGVVVANKDLLAK 159 (161) T ss_dssp TTEEECTTCEEEEETTEEEEESSCTTSC T ss_pred CCEEECCCCEEEEECCEEEEECHHHHCC T ss_conf 9999889999999799589988799424 No 56 >1uwf_A FIMH protein, FIMH; bacterial adhesin, carbohydrate recognition, adherence to mammalian cells, IG-variable fold, cell adhesion; HET: DEG; 1.69A {Escherichia coli} SCOP: b.2.3.2 PDB: 2vco_A* 1tr7_B* Probab=20.88 E-value=34 Score=13.14 Aligned_cols=36 Identities=14% Similarity=0.267 Sum_probs=22.9 Q ss_pred CCCCCCEEEEEEECCCCCCEEEECCCEEEEEEEEEC Q ss_conf 366744389999516865279833980356898508 Q gi|254780480|r 129 ISPNYSGPLYLEILPRTFPIVVRVGSRLSQIRFVKE 164 (367) Q Consensus 129 id~Gy~G~l~lEI~~~sfpI~v~~G~rl~Qi~f~~g 164 (367) ...-|.=+|||-..+-..+|.++.|+.|++|-+++- T Consensus 99 ~~~p~p~klYLt~~~~aggV~I~~Gd~iatl~~~qt 134 (158) T 1uwf_A 99 TDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQT 134 (158) T ss_dssp SCEECCEEEEEEECTTCCEEEECTTCEEEEEEEEEE T ss_pred CCCCEEEEEEEEECCCCCCEEEECCCEEEEEEEEEC T ss_conf 975202699998658988669855988999999951 Done!